RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 IL10RAQ13651 578 aa6.67□□□□□ -1.34
SYNE2-210ENST00000553455 MAN2A1Q16706 1144 aa6.67□□□□□ -1.34
SYNE2-210ENST00000553455 ZNF827Q17R98 1081 aa6.67□□□□□ -1.34
SYNE2-210ENST00000553455 PGS1Q32NB8 556 aa6.67□□□□□ -1.34
SYNE2-210ENST00000553455 ATG14Q6ZNE5 492 aa6.67□□□□□ -1.34
SYNE2-210ENST00000553455 Q6ZUG5 572 aa6.67□□□□□ -1.34
SYNE2-210ENST00000553455 OVCH2Q7RTZ1 564 aa6.67□□□□□ -1.34
SYNE2-210ENST00000553455 CLEC14AQ86T13 490 aa6.67□□□□□ -1.34
SYNE2-210ENST00000553455 IFNL2Q8IZJ0 200 aa6.67□□□□□ -1.34
SYNE2-210ENST00000553455 MSL3Q8N5Y2 521 aaKnown RBP6.67□□□□□ -1.34
SYNE2-210ENST00000553455 GPR156Q8NFN8 814 aa6.67□□□□□ -1.34
SYNE2-210ENST00000553455 PPP1R35Q8TAP8 253 aa6.67□□□□□ -1.34
SYNE2-210ENST00000553455 AJUBAQ96IF1 538 aa6.67□□□□□ -1.34
SYNE2-210ENST00000553455 L2HGDHQ9H9P8 463 aa6.67□□□□□ -1.34
SYNE2-210ENST00000553455 CD320Q9NPF0 282 aa6.67□□□□□ -1.34
SYNE2-210ENST00000553455 NTMQ9P121 344 aa6.67□□□□□ -1.34
SYNE2-210ENST00000553455 VWA7Q9Y334 891 aa6.67□□□□□ -1.34
SYNE2-210ENST00000553455 KCTD3Q9Y597 815 aa6.67□□□□□ -1.34
SYNE2-210ENST00000553455 FFAR3O14843 346 aa6.66□□□□□ -1.34
SYNE2-210ENST00000553455 DTNBO60941 627 aa6.66□□□□□ -1.34
SYNE2-210ENST00000553455 LTA4HP09960 611 aaKnown RBP6.66□□□□□ -1.34
SYNE2-210ENST00000553455 USP14P54578 494 aa6.66□□□□□ -1.34
SYNE2-210ENST00000553455 PURAQ00577 322 aaKnown RBP6.66□□□□□ -1.34
SYNE2-210ENST00000553455 PCOLCEQ15113 449 aa6.66□□□□□ -1.34
SYNE2-210ENST00000553455 NOMO1Q15155 1222 aa6.66□□□□□ -1.34
SYNE2-210ENST00000553455 MST1LQ2TV78 715 aa6.66□□□□□ -1.34
SYNE2-210ENST00000553455 Q6ZVL8 140 aa6.66□□□□□ -1.34
SYNE2-210ENST00000553455 CHST15Q7LFX5 561 aaPredicted RBP6.66□□□□□ -1.34
SYNE2-210ENST00000553455 REXO1L1PQ8IX06 675 aa6.66□□□□□ -1.34
SYNE2-210ENST00000553455 CCAR1Q8IX12 1150 aaKnown RBP6.66□□□□□ -1.34
SYNE2-210ENST00000553455 ADGRG2Q8IZP9 1017 aa6.66□□□□□ -1.34
SYNE2-210ENST00000553455 KAT5Q92993 513 aa6.66□□□□□ -1.34
SYNE2-210ENST00000553455 HDAC10Q969S8 669 aa6.66□□□□□ -1.34
SYNE2-210ENST00000553455 C1GALT1C1Q96EU7 318 aa6.66□□□□□ -1.34
SYNE2-210ENST00000553455 FAM84AQ96KN4 292 aa6.66□□□□□ -1.34
SYNE2-210ENST00000553455 FAM193BQ96PV7 902 aaPredicted RBP6.66□□□□□ -1.34
SYNE2-210ENST00000553455 KIAA1683Q9H0B3 1180 aa6.66□□□□□ -1.34
SYNE2-210ENST00000553455 CHST12Q9NRB3 414 aa6.66□□□□□ -1.34
SYNE2-210ENST00000553455 CNOT6Q9ULM6 557 aaKnown RBP6.66□□□□□ -1.34
SYNE2-210ENST00000553455 SMG5Q9UPR3 1016 aaKnown RBP6.66□□□□□ -1.34
SYNE2-210ENST00000553455 FRMPD2Q68DX3 1309 aaPredicted RBP6.66□□□□□ -1.34
SYNE2-210ENST00000553455 RPTORQ8N122 1335 aa6.66□□□□□ -1.34
SYNE2-210ENST00000553455 A0A1B0GTL3 188 aa6.65□□□□□ -1.34
SYNE2-210ENST00000553455 FAM171A2A8MVW0 826 aa6.65□□□□□ -1.34
SYNE2-210ENST00000553455 H3BML4 177 aa6.65□□□□□ -1.34
SYNE2-210ENST00000553455 PRAMEF4O60810 478 aa6.65□□□□□ -1.34
SYNE2-210ENST00000553455 ALDH2P05091 517 aa6.65□□□□□ -1.34
SYNE2-210ENST00000553455 ZNF888P0CJ79 500 aaPredicted RBP6.65□□□□□ -1.34
SYNE2-210ENST00000553455 TRIM27P14373 513 aa6.65□□□□□ -1.34
SYNE2-210ENST00000553455 CSF2RBP32927 897 aa6.65□□□□□ -1.34
SYNE2-210ENST00000553455 SLC6A9P48067 706 aa6.65□□□□□ -1.34
SYNE2-210ENST00000553455 DSC2Q02487 901 aa6.65□□□□□ -1.34
SYNE2-210ENST00000553455 ADAM15Q13444 863 aa6.65□□□□□ -1.34
SYNE2-210ENST00000553455 UBE3CQ15386 1083 aa6.65□□□□□ -1.34
SYNE2-210ENST00000553455 KSR2Q6VAB6 950 aa6.65□□□□□ -1.34
SYNE2-210ENST00000553455 TAS1R1Q7RTX1 841 aa6.65□□□□□ -1.34
SYNE2-210ENST00000553455 RTKN2Q8IZC4 609 aa6.65□□□□□ -1.34
SYNE2-210ENST00000553455 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.65□□□□□ -1.34
SYNE2-210ENST00000553455 SNX33Q8WV41 574 aa6.65□□□□□ -1.34
SYNE2-210ENST00000553455 GFM2Q969S9 779 aaKnown RBP6.65□□□□□ -1.34
SYNE2-210ENST00000553455 DACT3Q96B18 629 aaPredicted RBP6.65□□□□□ -1.34
SYNE2-210ENST00000553455 SLC39A13Q96H72 371 aa6.65□□□□□ -1.34
SYNE2-210ENST00000553455 SARGQ9BW04 601 aa6.65□□□□□ -1.34
SYNE2-210ENST00000553455 SIK3Q9Y2K2 1263 aa6.65□□□□□ -1.34
SYNE2-210ENST00000553455 CTDP1Q9Y5B0 961 aaPredicted RBP6.65□□□□□ -1.34
SYNE2-210ENST00000553455 C2orf78A6NCI8 922 aa6.64□□□□□ -1.35
SYNE2-210ENST00000553455 TCAF2A6NFQ2 919 aa6.64□□□□□ -1.35
SYNE2-210ENST00000553455 AKR1B10O60218 316 aa6.64□□□□□ -1.35
SYNE2-210ENST00000553455 TUSC2O75896 110 aa6.64□□□□□ -1.35
SYNE2-210ENST00000553455 C1QTNF9P0C862 333 aa6.64□□□□□ -1.35
SYNE2-210ENST00000553455 MRE11P49959 708 aa6.64□□□□□ -1.35
SYNE2-210ENST00000553455 SESN2P58004 480 aaPredicted RBP6.64□□□□□ -1.35
SYNE2-210ENST00000553455 UBE4AQ14139 1066 aa6.64□□□□□ -1.35
SYNE2-210ENST00000553455 C19orf54Q5BKX5 351 aa6.64□□□□□ -1.35
SYNE2-210ENST00000553455 MIGA2Q7L4E1 593 aa6.64□□□□□ -1.35
SYNE2-210ENST00000553455 DENND1CQ8IV53 801 aa6.64□□□□□ -1.35
SYNE2-210ENST00000553455 LILRA3Q8N6C8 439 aaPredicted RBP6.64□□□□□ -1.35
SYNE2-210ENST00000553455 MBD6Q96DN6 1003 aa6.64□□□□□ -1.35
SYNE2-210ENST00000553455 UIMC1Q96RL1 719 aa6.64□□□□□ -1.35
SYNE2-210ENST00000553455 LRFN3Q9BTN0 628 aa6.64□□□□□ -1.35
SYNE2-210ENST00000553455 CARD11Q9BXL7 1154 aa6.64□□□□□ -1.35
SYNE2-210ENST00000553455 DDX21Q9NR30 783 aaKnown RBP eCLIP6.64□□□□□ -1.35
SYNE2-210ENST00000553455 ADAM29Q9UKF5 820 aa6.64□□□□□ -1.35
SYNE2-210ENST00000553455 PCDHB1Q9Y5F3 818 aa6.64□□□□□ -1.35
SYNE2-210ENST00000553455 PCDHA13Q9Y5I0 950 aa6.64□□□□□ -1.35
SYNE2-210ENST00000553455 CFAP20Q9Y6A4 193 aaKnown RBP6.64□□□□□ -1.35
SYNE2-210ENST00000553455 B3GALT2O43825 422 aa6.63□□□□□ -1.35
SYNE2-210ENST00000553455 FARP2O94887 1054 aaPredicted RBP6.63□□□□□ -1.35
SYNE2-210ENST00000553455 UBXN7O94888 489 aa6.63□□□□□ -1.35
SYNE2-210ENST00000553455 ADSLP30566 484 aaPredicted RBP6.63□□□□□ -1.35
SYNE2-210ENST00000553455 SARSP49591 514 aaKnown RBP6.63□□□□□ -1.35
SYNE2-210ENST00000553455 MEOX1P50221 254 aa6.63□□□□□ -1.35
SYNE2-210ENST00000553455 RRADP55042 308 aa6.63□□□□□ -1.35
SYNE2-210ENST00000553455 RHBDL3P58872 404 aa6.63□□□□□ -1.35
SYNE2-210ENST00000553455 AGBL4Q5VU57 503 aa6.63□□□□□ -1.35
SYNE2-210ENST00000553455 MCTP2Q6DN12 878 aa6.63□□□□□ -1.35
SYNE2-210ENST00000553455 GPR155Q7Z3F1 870 aa6.63□□□□□ -1.35
SYNE2-210ENST00000553455 CARFQ8N187 725 aa6.63□□□□□ -1.35
SYNE2-210ENST00000553455 KLHL36Q8N4N3 616 aa6.63□□□□□ -1.35
SYNE2-210ENST00000553455 TXNDC5Q8NBS9 432 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms