RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 XPNPEP1Q9NQW7 623 aa12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 F8W810 466 aa12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 SLITRK3O94933 977 aa12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 BRD1O95696 1058 aa12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 POMCP01189 267 aa12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 SSBP05455 408 aaKnown RBP eCLIP12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 FOSBP53539 338 aa12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 CDC42EP1Q00587 391 aa12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 EPHA7Q15375 998 aa12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 CPLX2Q6PUV4 134 aaKnown RBP12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 GLB1LQ6UWU2 654 aa12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 TAS1R1Q7RTX1 841 aa12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 MRPL10Q7Z7H8 261 aaKnown RBP12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 C4orf19Q8IY42 314 aa12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 KREMEN2Q8NCW0 462 aa12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 SMG8Q8ND04 991 aaKnown RBP12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 CFAP54Q96N23 3096 aa12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 EIF2AQ9BY44 585 aaKnown RBP12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 KCNH6Q9H252 994 aa12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 FAM86C1Q9NVL1 165 aa12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 MIOSQ9NXC5 875 aa12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 ORC3Q9UBD5 711 aaPredicted RBP12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 HES2Q9Y543 173 aa12.92□□□□□ -0.34
PRPF40B-212ENST00000551111 STK36Q9NRP7 1315 aa12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 DMDP11532 3685 aa12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 FSD2A1L4K1 749 aa12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 LILRB3O75022 631 aa12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 SRGAP2BP0DMP2 458 aa12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 MYBP10242 640 aa12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 YWHABP31946 246 aaKnown RBP12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 POLGP54098 1239 aaPredicted RBP12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 AK2P54819 239 aa12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 RNASELQ05823 741 aaKnown RBP12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 EMC2Q15006 297 aa12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 PTPN14Q15678 1187 aa12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 ME3Q16798 604 aa12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 XKR9Q5GH70 373 aa12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 TMC5Q6UXY8 1006 aa12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 FERMT3Q86UX7 667 aa12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 TPH2Q8IWU9 490 aa12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 RNF149Q8NC42 400 aa12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 PSPC1Q8WXF1 523 aaKnown RBP12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 SLC7A3Q8WY07 619 aa12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 CPB2Q96IY4 423 aa12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 INO80BQ9C086 356 aaPredicted RBP12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 LIMD1Q9UGP4 676 aa12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 IRAK3Q9Y616 596 aa12.91□□□□□ -0.34
PRPF40B-212ENST00000551111 ZFHX2Q9C0A1 2572 aaPredicted RBP12.9□□□□□ -0.34
PRPF40B-212ENST00000551111 VWA8A3KMH1 1905 aa12.9□□□□□ -0.34
PRPF40B-212ENST00000551111 NRP1O14786 923 aa12.9□□□□□ -0.34
PRPF40B-212ENST00000551111 CNPP09543 421 aaKnown RBP12.9□□□□□ -0.34
PRPF40B-212ENST00000551111 AVPR2P30518 371 aa12.9□□□□□ -0.34
PRPF40B-212ENST00000551111 ST3GAL1Q11201 340 aa12.9□□□□□ -0.34
PRPF40B-212ENST00000551111 TPRNQ4KMQ1 711 aa12.9□□□□□ -0.34
PRPF40B-212ENST00000551111 CES5AQ6NT32 575 aa12.9□□□□□ -0.34
PRPF40B-212ENST00000551111 SRGAP1Q7Z6B7 1085 aa12.9□□□□□ -0.34
PRPF40B-212ENST00000551111 CDR2LQ86X02 465 aaPredicted RBP12.9□□□□□ -0.34
PRPF40B-212ENST00000551111 FAM177A1Q8N128 213 aaPredicted RBP12.9□□□□□ -0.34
PRPF40B-212ENST00000551111 ASAP3Q8TDY4 903 aa12.9□□□□□ -0.34
PRPF40B-212ENST00000551111 KLHL5Q96PQ7 755 aa12.9□□□□□ -0.34
PRPF40B-212ENST00000551111 RSAD1Q9HA92 442 aa12.9□□□□□ -0.34
PRPF40B-212ENST00000551111 MARCH5Q9NX47 278 aa12.9□□□□□ -0.34
PRPF40B-212ENST00000551111 CACNG4Q9UBN1 327 aa12.9□□□□□ -0.34
PRPF40B-212ENST00000551111 BTBD18B2RXH4 712 aa12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 C2CD2LO14523 706 aa12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 TBX3O15119 743 aa12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 TSPAN1O60635 241 aa12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 JAK2O60674 1132 aa12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 SKIP12755 728 aa12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 GCFC2P16383 781 aaKnown RBP12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 RAB27AP51159 221 aa12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 PTENP60484 403 aa12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 ITIH3Q06033 890 aa12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 ZBTB33Q86T24 672 aa12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 SUGP1Q8IWZ8 645 aaKnown RBP12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 PIGOQ8TEQ8 1089 aa12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 RABGGTAQ92696 567 aa12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 RIPOR3Q96MK2 946 aa12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 ZFP42Q96MM3 310 aa12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 GAD1Q99259 594 aa12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 HSD17B14Q9BPX1 270 aa12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 EIF2AK1Q9BQI3 630 aaKnown RBP12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 JPH2Q9BR39 696 aaPredicted RBP12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 FAN1Q9Y2M0 1017 aa12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 PRG3Q9Y2Y8 225 aaPredicted RBP12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 IPPQ9Y573 584 aa12.89□□□□□ -0.35
PRPF40B-212ENST00000551111 B4GALT5O43286 388 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 MARCH6O60337 910 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 CDKL5O76039 1030 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 EFEMP2O95967 443 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 ALDH2P05091 517 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 NCLP19338 710 aaKnown RBP12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 RFC5P40937 340 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 MTHFRP42898 656 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 CLCN4P51793 760 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 CAPSQ13938 189 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 AMHR2Q16671 573 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 KIAA1841Q6NSI8 718 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 COLGALT2Q8IYK4 626 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 NSUN7Q8NE18 718 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms