RNA–Protein interactions for RNA: ENST00000548225.1

RNF41-205, Transcript of ring finger protein 41, humanhuman

TSL 5

Gene RNF41, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-205ENST00000548225 PPM1AP35813 382 aa16.79■□□□□ 0.28
RNF41-205ENST00000548225 LRRC55Q6ZSA7 311 aa16.79■□□□□ 0.28
RNF41-205ENST00000548225 HACE1Q8IYU2 909 aa16.79■□□□□ 0.28
RNF41-205ENST00000548225 COLGALT1Q8NBJ5 622 aa16.79■□□□□ 0.28
RNF41-205ENST00000548225 RUSC1Q9BVN2 902 aa16.79■□□□□ 0.28
RNF41-205ENST00000548225 CCSER1Q9C0I3 900 aa16.79■□□□□ 0.28
RNF41-205ENST00000548225 NSUN3Q9H649 340 aaKnown RBP16.79■□□□□ 0.28
RNF41-205ENST00000548225 SRPRBQ9Y5M8 271 aaKnown RBP16.79■□□□□ 0.28
RNF41-205ENST00000548225 A0A1B0GUA9 196 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 HIP1RO75146 1068 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 OFD1O75665 1012 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 ITGB1P05556 798 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 PLA2G4BP0C869 781 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 SLC12A3P55017 1021 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 DMP1Q13316 513 aaPredicted RBP16.78■□□□□ 0.28
RNF41-205ENST00000548225 AAK1Q2M2I8 961 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 NOMO2Q5JPE7 1267 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 FAM173BQ6P4H8 233 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 SLC27A1Q6PCB7 646 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 THNSL1Q8IYQ7 743 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 RASSF8Q8NHQ8 419 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 SPPL3Q8TCT6 385 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 URGCPQ8TCY9 931 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 LPPQ93052 612 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 CPB2Q96IY4 423 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 ZNF558Q96NG5 402 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 TRIM6Q9C030 488 aaPredicted RBP16.78■□□□□ 0.28
RNF41-205ENST00000548225 CCDC113Q9H0I3 377 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 RSAD1Q9HA92 442 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 ALG13Q9NP73 1137 aaKnown RBP16.78■□□□□ 0.28
RNF41-205ENST00000548225 FBXO2Q9UK22 296 aaPredicted RBP16.78■□□□□ 0.28
RNF41-205ENST00000548225 LZTS1Q9Y250 596 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 IPPQ9Y573 584 aa16.78■□□□□ 0.28
RNF41-205ENST00000548225 ZMYM2Q9UBW7 1377 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 ATG2AQ2TAZ0 1938 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 ACKR2O00590 384 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 N4BP3O15049 544 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 B4GALT5O43286 388 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 FGF18O76093 207 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 SSBP05455 408 aaKnown RBP eCLIP16.77■□□□□ 0.28
RNF41-205ENST00000548225 PRKCBP05771 671 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 ITGA4P13612 1032 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 TXLNAP40222 546 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 NASPP49321 788 aaPredicted RBP16.77■□□□□ 0.28
RNF41-205ENST00000548225 PLCB3Q01970 1234 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 GRIN1Q05586 938 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 PRPF4BQ13523 1007 aaKnown RBP16.77■□□□□ 0.28
RNF41-205ENST00000548225 SLC39A14Q15043 492 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 KCNT2Q6UVM3 1135 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 AGMOQ6ZNB7 445 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 DAW1Q8N136 415 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 POF1BQ8WVV4 589 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 HLA-CQ95604 372 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 PPP2R3CQ969Q6 453 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 ZNF396Q96N95 335 aaPredicted RBP16.77■□□□□ 0.28
RNF41-205ENST00000548225 USP28Q96RU2 1077 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 PLIN2Q99541 437 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 EIF2AQ9BY44 585 aaKnown RBP16.77■□□□□ 0.28
RNF41-205ENST00000548225 PRDM6Q9NQX0 595 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 KANSL3Q9P2N6 904 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 HCSTQ9UBK5 93 aa16.77■□□□□ 0.28
RNF41-205ENST00000548225 RBM19Q9Y4C8 960 aaKnown RBP16.77■□□□□ 0.28
RNF41-205ENST00000548225 PLXNA4Q9HCM2 1894 aa16.77■□□□□ 0.27
RNF41-205ENST00000548225 MEIS3P2A8K0S8 358 aa16.76■□□□□ 0.27
RNF41-205ENST00000548225 INPPL1O15357 1258 aa16.76■□□□□ 0.27
RNF41-205ENST00000548225 NCK2O43639 380 aa16.76■□□□□ 0.27
RNF41-205ENST00000548225 ZSCAN22P10073 491 aaPredicted RBP16.76■□□□□ 0.27
RNF41-205ENST00000548225 MARCKSP29966 332 aaPredicted RBP16.76■□□□□ 0.27
RNF41-205ENST00000548225 NPTX2P47972 431 aa16.76■□□□□ 0.27
RNF41-205ENST00000548225 MRPS5P82675 430 aaKnown RBP16.76■□□□□ 0.27
RNF41-205ENST00000548225 MAPK7Q13164 816 aa16.76■□□□□ 0.27
RNF41-205ENST00000548225 PDE12Q6L8Q7 609 aaKnown RBP16.76■□□□□ 0.27
RNF41-205ENST00000548225 SMG8Q8ND04 991 aaKnown RBP16.76■□□□□ 0.27
RNF41-205ENST00000548225 NTPCRQ9BSD7 190 aaKnown RBP16.76■□□□□ 0.27
RNF41-205ENST00000548225 TMEM134Q9H6X4 195 aa16.76■□□□□ 0.27
RNF41-205ENST00000548225 TBC1D13Q9NVG8 400 aa16.76■□□□□ 0.27
RNF41-205ENST00000548225 SPG21Q9NZD8 308 aa16.76■□□□□ 0.27
RNF41-205ENST00000548225 CCDC39Q9UFE4 941 aa16.76■□□□□ 0.27
RNF41-205ENST00000548225 PUF60Q9UHX1 559 aaKnown RBP16.76■□□□□ 0.27
RNF41-205ENST00000548225 INPP5FQ9Y2H2 1132 aa16.76■□□□□ 0.27
RNF41-205ENST00000548225 GIT1Q9Y2X7 761 aa16.76■□□□□ 0.27
RNF41-205ENST00000548225 CCDC169A6NNP5 214 aa16.75■□□□□ 0.27
RNF41-205ENST00000548225 K7ERI5 159 aa16.75■□□□□ 0.27
RNF41-205ENST00000548225 PLCG1P19174 1290 aa16.75■□□□□ 0.27
RNF41-205ENST00000548225 ALDH7A1P49419 539 aaKnown RBP16.75■□□□□ 0.27
RNF41-205ENST00000548225 PEX3P56589 373 aa16.75■□□□□ 0.27
RNF41-205ENST00000548225 CEBPZQ03701 1054 aaKnown RBP16.75■□□□□ 0.27
RNF41-205ENST00000548225 KRT17Q04695 432 aa16.75■□□□□ 0.27
RNF41-205ENST00000548225 RNASELQ05823 741 aaKnown RBP16.75■□□□□ 0.27
RNF41-205ENST00000548225 CAMK1Q14012 370 aa16.75■□□□□ 0.27
RNF41-205ENST00000548225 KARSQ15046 597 aaKnown RBP16.75■□□□□ 0.27
RNF41-205ENST00000548225 TMEM132AQ24JP5 1023 aa16.75■□□□□ 0.27
RNF41-205ENST00000548225 LONRF3Q496Y0 759 aa16.75■□□□□ 0.27
RNF41-205ENST00000548225 TCEAL5Q5H9L2 206 aa16.75■□□□□ 0.27
RNF41-205ENST00000548225 TJAP1Q5JTD0 557 aa16.75■□□□□ 0.27
RNF41-205ENST00000548225 APBB1IPQ7Z5R6 666 aaPredicted RBP16.75■□□□□ 0.27
RNF41-205ENST00000548225 SLC39A11Q8N1S5 342 aa16.75■□□□□ 0.27
RNF41-205ENST00000548225 KRI1Q8N9T8 703 aaKnown RBP16.75■□□□□ 0.27
RNF41-205ENST00000548225 SPIRE2Q8WWL2 714 aa16.75■□□□□ 0.27
RNF41-205ENST00000548225 MRPS27Q92552 414 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms