RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 FGGP02679 453 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 RARRES1P49788 294 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 PEX3P56589 373 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 RPS6P62753 249 aaKnown RBP12.48□□□□□ -0.41
C11orf54-214ENST00000540113 TNFAIP1Q13829 316 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 STXBP4Q6ZWJ1 553 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 MAATS1Q7Z4T9 603 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 MCF2L2Q86YR7 1114 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 POP1Q99575 1024 aaKnown RBP12.48□□□□□ -0.41
C11orf54-214ENST00000540113 SYT11Q9BT88 431 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 TAF1DQ9H5J8 278 aaPredicted RBP12.48□□□□□ -0.41
C11orf54-214ENST00000540113 RPAP3Q9H6T3 665 aaPredicted RBP12.48□□□□□ -0.41
C11orf54-214ENST00000540113 TMOD4Q9NZQ9 345 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 HACL1Q9UJ83 578 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 PLAAQ9Y263 795 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 TELO2Q9Y4R8 837 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 CALCAP01258 141 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 P4HBP07237 508 aaKnown RBP12.48□□□□□ -0.41
C11orf54-214ENST00000540113 IVLP07476 585 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 LMNB1P20700 586 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 VAMP7P51809 220 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 PPFIA1Q13136 1202 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 MTMR1Q13613 665 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 PGM5Q15124 567 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 C1orf220Q5T0J3 134 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 CPNE8Q86YQ8 564 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 CTNNBL1Q8WYA6 563 aaPredicted RBP12.48□□□□□ -0.41
C11orf54-214ENST00000540113 SAAL1Q96ER3 474 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 HES6Q96HZ4 224 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 TRIM51Q9BSJ1 452 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 AMFRQ9UKV5 643 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 KRT13P13646 458 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 RPS12P25398 132 aaKnown RBP12.47□□□□□ -0.41
C11orf54-214ENST00000540113 CCT5P48643 541 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 LMBR1Q8WVP7 490 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 ATG4CQ96DT6 458 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 LRRC4CQ9HCJ2 640 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 HSPBP1Q9NZL4 362 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 SUCLA2Q9P2R7 463 aaPredicted RBP12.47□□□□□ -0.41
C11orf54-214ENST00000540113 GRIN2DO15399 1336 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 LTBP3Q9NS15 1303 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 PHIPQ8WWQ0 1821 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 TESPA1A2RU30 521 aaPredicted RBP12.47□□□□□ -0.41
C11orf54-214ENST00000540113 ANKRD63C9JTQ0 380 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 DDX3YO15523 660 aaKnown RBP12.47□□□□□ -0.41
C11orf54-214ENST00000540113 ZEB2O60315 1214 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 SHOX2O60902 331 aaPredicted RBP12.47□□□□□ -0.41
C11orf54-214ENST00000540113 SGPL1O95470 568 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 ADRB2P07550 413 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 YWHABP31946 246 aaKnown RBP12.47□□□□□ -0.41
C11orf54-214ENST00000540113 MAP2K1Q02750 393 aaPredicted RBP12.47□□□□□ -0.41
C11orf54-214ENST00000540113 PPP2R5AQ15172 486 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 CEP85LQ5SZL2 805 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 FAM102BQ5T8I3 360 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 NSMFQ6X4W1 530 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 HAUS6Q7Z4H7 955 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 RFFLQ8WZ73 363 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 CCDC127Q96BQ5 260 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 AGPAT1Q99943 283 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 ISCUQ9H1K1 167 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 ERVK-5Q9HDB9 667 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 LARSQ9P2J5 1176 aaKnown RBP12.47□□□□□ -0.41
C11orf54-214ENST00000540113 FEZ2Q9UHY8 353 aaPredicted RBP12.47□□□□□ -0.41
C11orf54-214ENST00000540113 DBR1Q9UK59 544 aaKnown RBP12.47□□□□□ -0.41
C11orf54-214ENST00000540113 RIPK3Q9Y572 518 aa12.47□□□□□ -0.41
C11orf54-214ENST00000540113 WDR81Q562E7 1941 aa12.46□□□□□ -0.41
C11orf54-214ENST00000540113 A0A0A6YYK5 440 aaPredicted RBP12.46□□□□□ -0.41
C11orf54-214ENST00000540113 PPFIA4O75335 1185 aa12.46□□□□□ -0.41
C11orf54-214ENST00000540113 CCNE2O96020 404 aa12.46□□□□□ -0.41
C11orf54-214ENST00000540113 TMEM253P0C7T8 217 aa12.46□□□□□ -0.41
C11orf54-214ENST00000540113 HOXD11P31277 338 aaPredicted RBP12.46□□□□□ -0.41
C11orf54-214ENST00000540113 QARSP47897 775 aaKnown RBP12.46□□□□□ -0.41
C11orf54-214ENST00000540113 MARCKSL1P49006 195 aa12.46□□□□□ -0.41
C11orf54-214ENST00000540113 GUCY1A3Q02108 690 aa12.46□□□□□ -0.41
C11orf54-214ENST00000540113 SP4Q02446 784 aa12.46□□□□□ -0.41
C11orf54-214ENST00000540113 PPATQ06203 517 aa12.46□□□□□ -0.41
C11orf54-214ENST00000540113 LLGL1Q15334 1064 aa12.46□□□□□ -0.41
C11orf54-214ENST00000540113 UAP1Q16222 522 aaPredicted RBP12.46□□□□□ -0.41
C11orf54-214ENST00000540113 CBWD2Q8IUF1 395 aa12.46□□□□□ -0.41
C11orf54-214ENST00000540113 RPUSD2Q8IZ73 545 aaKnown RBP12.46□□□□□ -0.41
C11orf54-214ENST00000540113 RNPC3Q96LT9 517 aaKnown RBP12.46□□□□□ -0.41
C11orf54-214ENST00000540113 PDCD2LQ9BRP1 358 aa12.46□□□□□ -0.41
C11orf54-214ENST00000540113 PXMP2Q9NR77 195 aa12.46□□□□□ -0.41
C11orf54-214ENST00000540113 TOPORSQ9NS56 1045 aaPredicted RBP12.46□□□□□ -0.41
C11orf54-214ENST00000540113 CNOT7Q9UIV1 285 aaKnown RBP12.46□□□□□ -0.41
C11orf54-214ENST00000540113 CCDC169A6NNP5 214 aa12.46□□□□□ -0.42
C11orf54-214ENST00000540113 VWA5AO00534 786 aa12.46□□□□□ -0.42
C11orf54-214ENST00000540113 CES2O00748 559 aa12.46□□□□□ -0.42
C11orf54-214ENST00000540113 LYPLA2O95372 231 aa12.46□□□□□ -0.42
C11orf54-214ENST00000540113 FTLP02792 175 aaPredicted RBP12.46□□□□□ -0.42
C11orf54-214ENST00000540113 PLS3P13797 630 aa12.46□□□□□ -0.42
C11orf54-214ENST00000540113 HSD17B3P37058 310 aa12.46□□□□□ -0.42
C11orf54-214ENST00000540113 XKR9Q5GH70 373 aa12.46□□□□□ -0.42
C11orf54-214ENST00000540113 PRAMEF18Q5VWM3 479 aa12.46□□□□□ -0.42
C11orf54-214ENST00000540113 SLC9A9Q8IVB4 645 aa12.46□□□□□ -0.42
C11orf54-214ENST00000540113 SYCE1Q8N0S2 351 aa12.46□□□□□ -0.42
C11orf54-214ENST00000540113 RASGEF1CQ8N431 466 aa12.46□□□□□ -0.42
C11orf54-214ENST00000540113 BCAS4Q8TDM0 211 aa12.46□□□□□ -0.42
C11orf54-214ENST00000540113 ALG3Q92685 438 aa12.46□□□□□ -0.42
C11orf54-214ENST00000540113 BTBD6Q96KE9 485 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms