RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 CALML6Q8TD86 181 aa4.07□□□□□ -1.76
COPB1-205ENST00000526527 ERCC4Q92889 916 aaPredicted RBP4.07□□□□□ -1.76
COPB1-205ENST00000526527 MIEF2Q96C03 454 aa4.07□□□□□ -1.76
COPB1-205ENST00000526527 RPL10LQ96L21 214 aaKnown RBP4.07□□□□□ -1.76
COPB1-205ENST00000526527 BBC3Q96PG8 261 aaPredicted RBP4.07□□□□□ -1.76
COPB1-205ENST00000526527 GPHA2Q96T91 129 aa4.07□□□□□ -1.76
COPB1-205ENST00000526527 SLC6A15Q9H2J7 730 aa4.07□□□□□ -1.76
COPB1-205ENST00000526527 NRDE2Q9H7Z3 1164 aa4.07□□□□□ -1.76
COPB1-205ENST00000526527 VWA7Q9Y334 891 aa4.07□□□□□ -1.76
COPB1-205ENST00000526527 B3GALT1Q9Y5Z6 326 aa4.07□□□□□ -1.76
COPB1-205ENST00000526527 A0A087X0B3 334 aa4.06□□□□□ -1.76
COPB1-205ENST00000526527 A0A0A6YYK5 440 aaPredicted RBP4.06□□□□□ -1.76
COPB1-205ENST00000526527 C2orf78A6NCI8 922 aa4.06□□□□□ -1.76
COPB1-205ENST00000526527 ULK1O75385 1050 aa4.06□□□□□ -1.76
COPB1-205ENST00000526527 F2P00734 622 aa4.06□□□□□ -1.76
COPB1-205ENST00000526527 CDK4P11802 303 aa4.06□□□□□ -1.76
COPB1-205ENST00000526527 LSSP48449 732 aa4.06□□□□□ -1.76
COPB1-205ENST00000526527 FNTBP49356 437 aa4.06□□□□□ -1.76
COPB1-205ENST00000526527 MAN2A2P49641 1150 aa4.06□□□□□ -1.76
COPB1-205ENST00000526527 KIF11P52732 1056 aa4.06□□□□□ -1.76
COPB1-205ENST00000526527 ADAM8P78325 824 aa4.06□□□□□ -1.76
COPB1-205ENST00000526527 ALDH6A1Q02252 535 aaKnown RBP4.06□□□□□ -1.76
COPB1-205ENST00000526527 ADCY1Q08828 1119 aa4.06□□□□□ -1.76
COPB1-205ENST00000526527 PTPROQ16827 1216 aa4.06□□□□□ -1.76
COPB1-205ENST00000526527 CC2D1AQ6P1N0 951 aaPredicted RBP4.06□□□□□ -1.76
COPB1-205ENST00000526527 MRGPREQ86SM8 312 aa4.06□□□□□ -1.76
COPB1-205ENST00000526527 EFHBQ8N7U6 833 aa4.06□□□□□ -1.76
COPB1-205ENST00000526527 ANKRD53Q8N9V6 530 aa4.06□□□□□ -1.76
COPB1-205ENST00000526527 ATL2Q8NHH9 583 aa4.06□□□□□ -1.76
COPB1-205ENST00000526527 LPPQ93052 612 aa4.06□□□□□ -1.76
COPB1-205ENST00000526527 FOXRED1Q96CU9 486 aaPredicted RBP4.06□□□□□ -1.76
COPB1-205ENST00000526527 SLC7A6OSQ96CW6 309 aaPredicted RBP4.06□□□□□ -1.76
COPB1-205ENST00000526527 MYH16Q9H6N6 1097 aa4.06□□□□□ -1.76
COPB1-205ENST00000526527 PACSIN3Q9UKS6 424 aa4.06□□□□□ -1.76
COPB1-205ENST00000526527 RBM8AQ9Y5S9 174 aaKnown RBP4.06□□□□□ -1.76
COPB1-205ENST00000526527 PLEKHD1A6NEE1 506 aa4.05□□□□□ -1.76
COPB1-205ENST00000526527 ZAR1LA6NP61 321 aa4.05□□□□□ -1.76
COPB1-205ENST00000526527 FAM20BO75063 409 aa4.05□□□□□ -1.76
COPB1-205ENST00000526527 RAB11FIP3O75154 756 aa4.05□□□□□ -1.76
COPB1-205ENST00000526527 H2AFYO75367 372 aaKnown RBP4.05□□□□□ -1.76
COPB1-205ENST00000526527 CD38P28907 300 aa4.05□□□□□ -1.76
COPB1-205ENST00000526527 ANTXR2P58335 489 aa4.05□□□□□ -1.76
COPB1-205ENST00000526527 BPIFB4P59827 614 aa4.05□□□□□ -1.76
COPB1-205ENST00000526527 ELAVL1Q15717 326 aaKnown RBP4.05□□□□□ -1.76
COPB1-205ENST00000526527 GORABQ5T7V8 394 aa4.05□□□□□ -1.76
COPB1-205ENST00000526527 FAM111BQ6SJ93 734 aa4.05□□□□□ -1.76
COPB1-205ENST00000526527 ZNF662Q6ZS27 426 aa4.05□□□□□ -1.76
COPB1-205ENST00000526527 RNF180Q86T96 592 aa4.05□□□□□ -1.76
COPB1-205ENST00000526527 RTN4RL1Q86UN2 441 aaPredicted RBP4.05□□□□□ -1.76
COPB1-205ENST00000526527 GSPT2Q8IYD1 628 aaKnown RBP4.05□□□□□ -1.76
COPB1-205ENST00000526527 KIAA1958Q8N8K9 716 aa4.05□□□□□ -1.76
COPB1-205ENST00000526527 HAS1Q92839 578 aa4.05□□□□□ -1.76
COPB1-205ENST00000526527 GPR87Q9BY21 358 aa4.05□□□□□ -1.76
COPB1-205ENST00000526527 PRDM16Q9HAZ2 1276 aa4.05□□□□□ -1.76
COPB1-205ENST00000526527 USP36Q9P275 1121 aaKnown RBP4.05□□□□□ -1.76
COPB1-205ENST00000526527 SAE1Q9UBE0 346 aaPredicted RBP4.05□□□□□ -1.76
COPB1-205ENST00000526527 DENND2AQ9ULE3 1009 aa4.05□□□□□ -1.76
COPB1-205ENST00000526527 NOP58Q9Y2X3 529 aaKnown RBP4.05□□□□□ -1.76
COPB1-205ENST00000526527 COL4A3BPQ9Y5P4 624 aa4.05□□□□□ -1.76
COPB1-205ENST00000526527 XDHP47989 1333 aa4.04□□□□□ -1.76
COPB1-205ENST00000526527 UBE2QL1A1L167 161 aa4.04□□□□□ -1.76
COPB1-205ENST00000526527 ALG1L2C9J202 215 aa4.04□□□□□ -1.76
COPB1-205ENST00000526527 PROB1E7EW31 1015 aa4.04□□□□□ -1.76
COPB1-205ENST00000526527 TRAF5O00463 557 aa4.04□□□□□ -1.76
COPB1-205ENST00000526527 CD40P25942 277 aa4.04□□□□□ -1.76
COPB1-205ENST00000526527 MECP2P51608 486 aaKnown RBP4.04□□□□□ -1.76
COPB1-205ENST00000526527 RABGGTBP53611 331 aa4.04□□□□□ -1.76
COPB1-205ENST00000526527 SESN2P58004 480 aaPredicted RBP4.04□□□□□ -1.76
COPB1-205ENST00000526527 IGBP1P78318 339 aa4.04□□□□□ -1.76
COPB1-205ENST00000526527 DSG1Q02413 1049 aa4.04□□□□□ -1.76
COPB1-205ENST00000526527 STRN3Q13033 797 aa4.04□□□□□ -1.76
COPB1-205ENST00000526527 TCIRG1Q13488 830 aa4.04□□□□□ -1.76
COPB1-205ENST00000526527 ZNF362Q5T0B9 420 aaPredicted RBP4.04□□□□□ -1.76
COPB1-205ENST00000526527 RNF219Q5W0B1 726 aaPredicted RBP4.04□□□□□ -1.76
COPB1-205ENST00000526527 ABHD17CQ6PCB6 329 aa4.04□□□□□ -1.76
COPB1-205ENST00000526527 SPATS2Q86XZ4 545 aaKnown RBP4.04□□□□□ -1.76
COPB1-205ENST00000526527 ADGRG3Q86Y34 549 aa4.04□□□□□ -1.76
COPB1-205ENST00000526527 C7orf31Q8N865 590 aa4.04□□□□□ -1.76
COPB1-205ENST00000526527 GCDHQ92947 438 aaPredicted RBP4.04□□□□□ -1.76
COPB1-205ENST00000526527 GFM2Q969S9 779 aaKnown RBP4.04□□□□□ -1.76
COPB1-205ENST00000526527 FOXB1Q99853 325 aa4.04□□□□□ -1.76
COPB1-205ENST00000526527 THG1LQ9NWX6 298 aaKnown RBP4.04□□□□□ -1.76
COPB1-205ENST00000526527 KCNG1Q9UIX4 513 aa4.04□□□□□ -1.76
COPB1-205ENST00000526527 SPO11Q9Y5K1 396 aa4.04□□□□□ -1.76
COPB1-205ENST00000526527 ST20-MTHFSA0A0A6YYL1 179 aa4.03□□□□□ -1.76
COPB1-205ENST00000526527 KLRG2A4D1S0 409 aaPredicted RBP4.03□□□□□ -1.76
COPB1-205ENST00000526527 GOLGA8BA8MQT2 603 aa4.03□□□□□ -1.76
COPB1-205ENST00000526527 FKBP9O95302 570 aa4.03□□□□□ -1.76
COPB1-205ENST00000526527 ZBTB48P10074 688 aaPredicted RBP4.03□□□□□ -1.76
COPB1-205ENST00000526527 KCNA6P17658 529 aa4.03□□□□□ -1.76
COPB1-205ENST00000526527 LSP1P33241 339 aa4.03□□□□□ -1.76
COPB1-205ENST00000526527 PTGS2P35354 604 aa4.03□□□□□ -1.76
COPB1-205ENST00000526527 RGS3P49796 1198 aa4.03□□□□□ -1.76
COPB1-205ENST00000526527 SESN3P58005 492 aa4.03□□□□□ -1.76
COPB1-205ENST00000526527 ROM1Q03395 351 aa4.03□□□□□ -1.76
COPB1-205ENST00000526527 DDB1Q16531 1140 aa4.03□□□□□ -1.76
COPB1-205ENST00000526527 ATP13A4Q4VNC1 1196 aa4.03□□□□□ -1.76
COPB1-205ENST00000526527 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
COPB1-205ENST00000526527 IQSEC1Q6DN90 963 aa4.03□□□□□ -1.76
COPB1-205ENST00000526527 TIGD7Q6NT04 549 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms