RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 BANK1Q8NDB2 785 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 GPRC5AQ8NFJ5 357 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 ZFP91Q96JP5 570 aaPredicted RBP19.87■□□□□ 0.77
SDC2-202ENST00000518385 MKNK1Q9BUB5 465 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 MROH8Q9H579 483 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 WRAP73Q9P2S5 460 aaPredicted RBP19.87■□□□□ 0.77
SDC2-202ENST00000518385 TMEM88BA6NKF7 163 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 MYBP10242 640 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 HOXD13P35453 343 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 GNPTABQ3T906 1256 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 PADI6Q6TGC4 694 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 CACNA2D4Q7Z3S7 1137 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 FAM178BQ8IXR5 827 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 TMEM174Q8WUU8 243 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 RIN2Q8WYP3 895 aaPredicted RBP19.87■□□□□ 0.77
SDC2-202ENST00000518385 PARK7Q99497 189 aaKnown RBP19.87■□□□□ 0.77
SDC2-202ENST00000518385 TLR10Q9BXR5 811 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 EPN3Q9H201 632 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 R3HDMLQ9H3Y0 253 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 LARSQ9P2J5 1176 aaKnown RBP19.87■□□□□ 0.77
SDC2-202ENST00000518385 MORF4L1Q9UBU8 362 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 ARMCX3Q9UH62 379 aaPredicted RBP19.87■□□□□ 0.77
SDC2-202ENST00000518385 SAMM50Q9Y512 469 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 PCDHGC5Q9Y5F6 944 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 DDX39AO00148 427 aaKnown RBP19.86■□□□□ 0.77
SDC2-202ENST00000518385 NDUFAB1O14561 156 aa19.86■□□□□ 0.77
SDC2-202ENST00000518385 INHBEP58166 350 aa19.86■□□□□ 0.77
SDC2-202ENST00000518385 CUL1Q13616 776 aa19.86■□□□□ 0.77
SDC2-202ENST00000518385 NAB2Q15742 525 aa19.86■□□□□ 0.77
SDC2-202ENST00000518385 KLHDC7AQ5VTJ3 777 aa19.86■□□□□ 0.77
SDC2-202ENST00000518385 HHIPL1Q96JK4 782 aa19.86■□□□□ 0.77
SDC2-202ENST00000518385 PBKQ96KB5 322 aa19.86■□□□□ 0.77
SDC2-202ENST00000518385 MMRN2Q9H8L6 949 aa19.86■□□□□ 0.77
SDC2-202ENST00000518385 FAM155AB1AL88 458 aaPredicted RBP19.85■□□□□ 0.77
SDC2-202ENST00000518385 NR3C1P04150 777 aa19.85■□□□□ 0.77
SDC2-202ENST00000518385 RARRES1P49788 294 aa19.85■□□□□ 0.77
SDC2-202ENST00000518385 SNRPFP62306 86 aaKnown RBP19.85■□□□□ 0.77
SDC2-202ENST00000518385 CCNA1P78396 465 aa19.85■□□□□ 0.77
SDC2-202ENST00000518385 CNTN2Q02246 1040 aa19.85■□□□□ 0.77
SDC2-202ENST00000518385 ODR4Q5SWX8 454 aa19.85■□□□□ 0.77
SDC2-202ENST00000518385 SFMBT2Q5VUG0 894 aa19.85■□□□□ 0.77
SDC2-202ENST00000518385 RRAGAQ7L523 313 aa19.85■□□□□ 0.77
SDC2-202ENST00000518385 HS2ST1Q7LGA3 356 aa19.85■□□□□ 0.77
SDC2-202ENST00000518385 ANKRD13CQ8N6S4 541 aa19.85■□□□□ 0.77
SDC2-202ENST00000518385 P3H4Q92791 437 aa19.85■□□□□ 0.77
SDC2-202ENST00000518385 LRRC45Q96CN5 670 aa19.85■□□□□ 0.77
SDC2-202ENST00000518385 CALR3Q96L12 384 aaKnown RBP19.85■□□□□ 0.77
SDC2-202ENST00000518385 STRA6Q9BX79 667 aa19.85■□□□□ 0.77
SDC2-202ENST00000518385 ST6GALNAC4Q9H4F1 302 aa19.85■□□□□ 0.77
SDC2-202ENST00000518385 PCDHA10Q9Y5I2 948 aa19.85■□□□□ 0.77
SDC2-202ENST00000518385 BZW2Q9Y6E2 419 aaKnown RBP19.85■□□□□ 0.77
SDC2-202ENST00000518385 DUSP10Q9Y6W6 482 aa19.85■□□□□ 0.77
SDC2-202ENST00000518385 GOLGA6L10A6NI86 522 aa19.84■□□□□ 0.77
SDC2-202ENST00000518385 LRRC53A6NM62 1247 aa19.84■□□□□ 0.77
SDC2-202ENST00000518385 ZBTB39O15060 712 aa19.84■□□□□ 0.77
SDC2-202ENST00000518385 MEFVO15553 781 aaPredicted RBP19.84■□□□□ 0.77
SDC2-202ENST00000518385 ZMYND10O75800 440 aa19.84■□□□□ 0.77
SDC2-202ENST00000518385 HSPA9P38646 679 aaKnown RBP19.84■□□□□ 0.77
SDC2-202ENST00000518385 KLK7P49862 253 aa19.84■□□□□ 0.77
SDC2-202ENST00000518385 FSTL1Q12841 308 aa19.84■□□□□ 0.77
SDC2-202ENST00000518385 SPDYCQ5MJ68 293 aa19.84■□□□□ 0.77
SDC2-202ENST00000518385 FAM133AQ8N9E0 248 aa19.84■□□□□ 0.77
SDC2-202ENST00000518385 DRC1Q96MC2 740 aa19.84■□□□□ 0.77
SDC2-202ENST00000518385 CCDC43Q96MW1 224 aaKnown RBP19.84■□□□□ 0.77
SDC2-202ENST00000518385 ZIM3Q96PE6 472 aa19.84■□□□□ 0.77
SDC2-202ENST00000518385 FIZ1Q96SL8 496 aa19.84■□□□□ 0.77
SDC2-202ENST00000518385 NCAPGQ9BPX3 1015 aa19.84■□□□□ 0.77
SDC2-202ENST00000518385 MLXIPQ9HAP2 919 aa19.84■□□□□ 0.77
SDC2-202ENST00000518385 PKD2L1Q9P0L9 805 aa19.84■□□□□ 0.77
SDC2-202ENST00000518385 ABT1Q9ULW3 272 aaKnown RBP19.84■□□□□ 0.77
SDC2-202ENST00000518385 ASTN1O14525 1302 aa19.84■□□□□ 0.77
SDC2-202ENST00000518385 SPATA31C2B4DYI2 1134 aa19.83■□□□□ 0.77
SDC2-202ENST00000518385 IGF2BP3O00425 579 aaKnown RBP eCLIP19.83■□□□□ 0.776e-9■■■■■ 28.3
SDC2-202ENST00000518385 HIP1RO75146 1068 aa19.83■□□□□ 0.77
SDC2-202ENST00000518385 YWHABP31946 246 aaKnown RBP19.83■□□□□ 0.77
SDC2-202ENST00000518385 ICAM3P32942 547 aa19.83■□□□□ 0.77
SDC2-202ENST00000518385 MAPK7Q13164 816 aa19.83■□□□□ 0.77
SDC2-202ENST00000518385 BIRC3Q13489 604 aa19.83■□□□□ 0.77
SDC2-202ENST00000518385 MTMR3Q13615 1198 aa19.83■□□□□ 0.77
SDC2-202ENST00000518385 TTMPQ5BVD1 217 aa19.83■□□□□ 0.77
SDC2-202ENST00000518385 NFRKBQ6P4R8 1299 aa19.83■□□□□ 0.77
SDC2-202ENST00000518385 OTUD6AQ7L8S5 288 aa19.83■□□□□ 0.77
SDC2-202ENST00000518385 SLC9A9Q8IVB4 645 aa19.83■□□□□ 0.77
SDC2-202ENST00000518385 GSPT2Q8IYD1 628 aaKnown RBP19.83■□□□□ 0.77
SDC2-202ENST00000518385 OTUD6BQ8N6M0 293 aa19.83■□□□□ 0.77
SDC2-202ENST00000518385 ATP6V0A1Q93050 837 aa19.83■□□□□ 0.77
SDC2-202ENST00000518385 ATP6V1G3Q96LB4 118 aa19.83■□□□□ 0.77
SDC2-202ENST00000518385 MMP19Q99542 508 aa19.83■□□□□ 0.77
SDC2-202ENST00000518385 TMEM206Q9H813 350 aa19.83■□□□□ 0.77
SDC2-202ENST00000518385 ACTR5Q9H9F9 607 aaPredicted RBP19.83■□□□□ 0.77
SDC2-202ENST00000518385 PLCB1Q9NQ66 1216 aa19.83■□□□□ 0.77
SDC2-202ENST00000518385 LCTP09848 1927 aa19.83■□□□□ 0.77
SDC2-202ENST00000518385 DNAJC25-GNG10A0A024R161 153 aa19.83■□□□□ 0.76
SDC2-202ENST00000518385 TGFB1I1O43294 461 aa19.83■□□□□ 0.76
SDC2-202ENST00000518385 ATP9AO75110 1047 aa19.83■□□□□ 0.76
SDC2-202ENST00000518385 PPP1R37O75864 691 aa19.83■□□□□ 0.76
SDC2-202ENST00000518385 AFPP02771 609 aaKnown RBP19.83■□□□□ 0.76
SDC2-202ENST00000518385 XRCC5P13010 732 aaKnown RBP19.83■□□□□ 0.76
SDC2-202ENST00000518385 KCNA2P16389 499 aa19.83■□□□□ 0.76
SDC2-202ENST00000518385 KCNMA1Q12791 1236 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms