RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 MIIPQ5JXC2 388 aa4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 C1QL3Q5VWW1 255 aa4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 ZFPM1Q8IX07 1006 aa4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 CACTINQ8WUQ7 758 aaKnown RBP4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 CHAC2Q8WUX2 184 aa4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 ARL8AQ96BM9 186 aa4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 EAF2Q96CJ1 260 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 ZNF512Q96ME7 567 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 PLEKHG4BQ96PX9 1271 aa4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 MPHOSPH9Q99550 1183 aa4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 CSRNP2Q9H175 543 aa4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 CEP72Q9P209 647 aa4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 ING1Q9UK53 422 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 HS3ST3A1Q9Y663 406 aa4.84□□□□□ -1.63
HMGB1P29-201ENST00000505659 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P29-201ENST00000505659 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
HMGB1P29-201ENST00000505659 SLPIP03973 132 aa4.83□□□□□ -1.64
HMGB1P29-201ENST00000505659 SOX5P35711 763 aa4.83□□□□□ -1.64
HMGB1P29-201ENST00000505659 RABGGTBP53611 331 aa4.83□□□□□ -1.64
HMGB1P29-201ENST00000505659 NPEPPSP55786 919 aa4.83□□□□□ -1.64
HMGB1P29-201ENST00000505659 LGALS4P56470 323 aa4.83□□□□□ -1.64
HMGB1P29-201ENST00000505659 KLF10Q13118 480 aa4.83□□□□□ -1.64
HMGB1P29-201ENST00000505659 STAT4Q14765 748 aa4.83□□□□□ -1.64
HMGB1P29-201ENST00000505659 LMBR1LQ6UX01 489 aa4.83□□□□□ -1.64
HMGB1P29-201ENST00000505659 TGFBRAP1Q8WUH2 860 aa4.83□□□□□ -1.64
HMGB1P29-201ENST00000505659 MIEF2Q96C03 454 aa4.83□□□□□ -1.64
HMGB1P29-201ENST00000505659 ENKD1Q9H0I2 346 aa4.83□□□□□ -1.64
HMGB1P29-201ENST00000505659 APOBEC2Q9Y235 224 aaKnown RBP4.83□□□□□ -1.64
HMGB1P29-201ENST00000505659 KLRG2A4D1S0 409 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 ZEB2O60315 1214 aa4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 PRAMEF4O60810 478 aa4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 CANXP27824 592 aaKnown RBP4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 ACVRL1P37023 503 aa4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 GPR15P49685 360 aa4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 PTTG1IPP53801 180 aa4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 SESN3P58005 492 aa4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 CCT2P78371 535 aaKnown RBP4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 TMPRSS15P98073 1019 aa4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 SLC25A3Q00325 362 aa4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 UBE3CQ15386 1083 aa4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 LSM12Q3MHD2 195 aaKnown RBP4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 CT47A1Q5JQC4 288 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 FNDC7Q5VTL7 733 aa4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 ABHD15Q6UXT9 468 aa4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 THEMISQ8N1K5 641 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 ANKRD35Q8N283 1001 aa4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 OR14C36Q8NHC7 312 aa4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 COG1Q8WTW3 980 aa4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 ATXN2LQ8WWM7 1075 aaKnown RBP4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 CDY2AQ9Y6F7 541 aa4.82□□□□□ -1.64
HMGB1P29-201ENST00000505659 NARSO43776 548 aaKnown RBP4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 NRP2O60462 931 aa4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 FZD7O75084 574 aa4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 ZNF202O95125 648 aa4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 EYA4O95677 639 aa4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 HK1P19367 917 aa4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 POU3F3P20264 500 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 XPAP23025 273 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 CNGA1P29973 690 aa4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 MAN2A2P49641 1150 aa4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 NRG3P56975 720 aa4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 UGT8Q16880 541 aa4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 TAS1R1Q7RTX1 841 aa4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 TMPRSS6Q8IU80 811 aa4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 GLB1L2Q8IW92 636 aa4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 LILRA3Q8N6C8 439 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 OR5M3Q8NGP4 307 aa4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 GPR87Q9BY21 358 aa4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 CPEB1Q9BZB8 566 aaKnown RBP4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 QRSL1Q9H0R6 528 aaKnown RBP4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 DPP7Q9UHL4 492 aa4.81□□□□□ -1.64
HMGB1P29-201ENST00000505659 CYP27B1O15528 508 aa4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 HOXA3O43365 443 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 FAM20BO75063 409 aa4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 ULK1O75385 1050 aa4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 VIL1P09327 827 aaKnown RBP4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 ENPP1P22413 925 aa4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 GDF5P43026 501 aa4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 SCAND1P57086 179 aa4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 CDK17Q00537 523 aa4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 DUSP2Q05923 314 aa4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 CNGB1Q14028 1251 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 TOB2Q14106 344 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 FSCN1Q16658 493 aaKnown RBP4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 CCDC178Q5BJE1 867 aa4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 EGFLAMQ63HQ2 1017 aa4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 GSPT2Q8IYD1 628 aaKnown RBP4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 MDGA1Q8NFP4 955 aa4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 LSM14BQ9BX40 385 aaKnown RBP4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 WNT8AQ9H1J5 351 aa4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 EPC1Q9H2F5 836 aa4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 SLC2A4RGQ9NR83 387 aa4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 SRRDQ9UH36 339 aa4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 KCNG1Q9UIX4 513 aa4.8□□□□□ -1.64
HMGB1P29-201ENST00000505659 NRP1O14786 923 aa4.79□□□□□ -1.64
HMGB1P29-201ENST00000505659 ADCY6O43306 1168 aa4.79□□□□□ -1.64
HMGB1P29-201ENST00000505659 PRKD3O94806 890 aa4.79□□□□□ -1.64
HMGB1P29-201ENST00000505659 LTA4HP09960 611 aaKnown RBP4.79□□□□□ -1.64
HMGB1P29-201ENST00000505659 GNAT2P19087 354 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms