RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 GABRQQ9UN88 632 aa10.25□□□□□ -0.77
GAPVD1-219ENST00000495955 LOC102724159A0A0B4J2E5 919 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 RHOBTB3O94955 611 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 STAG3L1P0CL83 205 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 GIT2Q14161 759 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 PWP2Q15269 919 aaKnown RBP10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 U2AF1L4Q8WU68 220 aaKnown RBP10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 ARHGAP39Q9C0H5 1083 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 LZTFL1Q9NQ48 299 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 PTCH2Q9Y6C5 1203 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 NAV1Q8NEY1 1877 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 CAPN9O14815 690 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 FGFR4P22455 802 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 GNG11P61952 73 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 PLVAPQ9BX97 442 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 POLIQ9UNA4 740 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 PPME1Q9Y570 386 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 NR2E3Q9Y5X4 410 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 RREB1Q92766 1687 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 LAMB2P55268 1798 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 KIAA0391O15091 583 aaKnown RBP10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 TACC1O75410 805 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 ASGR1P07306 291 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 DUOXA2Q1HG44 320 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 ANKRD40Q6AI12 368 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 ETNPPLQ8TBG4 499 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.24□□□□□ -0.775e-11■■■■□ 24
GAPVD1-219ENST00000495955 KLK14Q9P0G3 267 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 CTTNBP2NLQ9P2B4 639 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 RPTORQ8N122 1335 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 TRIM49P0CI25 452 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 TRIM49CP0CI26 452 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 PAFAH1B1P43034 410 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 SNW1Q13573 536 aaKnown RBP10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 ELMSAN1Q6PJG2 1045 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 PLPPR4Q7Z2D5 763 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 C16orf45Q96MC5 204 aaPredicted RBP10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 GPR20Q99678 358 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 FERMT1Q9BQL6 677 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 HTATIP2Q9BUP3 242 aa10.24□□□□□ -0.77
GAPVD1-219ENST00000495955 TADA2AO75478 443 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 URI1O94763 535 aaPredicted RBP10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 RFX1P22670 979 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 BPIFB4P59827 614 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 PAN2Q504Q3 1202 aaKnown RBP10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 FAM81BQ96LP2 452 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 HDAC6Q9UBN7 1215 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 ATP8B3O60423 1300 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 EIF3DO15371 548 aaKnown RBP eCLIP10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 EVI5O60447 810 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 SKIP12755 728 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 SEMA3FQ13275 785 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 ITGA7Q13683 1181 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 TMEM132DQ14C87 1099 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 KRT31Q15323 416 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 DCAF4L1Q3SXM0 396 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 ZNF394Q53GI3 561 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 MS4A4AQ96JQ5 239 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 PNMA5Q96PV4 448 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 USTQ9Y2C2 406 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 NID2Q14112 1375 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 ANXA13P27216 316 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 CCL23P55773 120 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 SKIV2LQ15477 1246 aaKnown RBP10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 SNRNP35Q16560 246 aaKnown RBP10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 SEZ6Q53EL9 994 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 CLEC17AQ6ZS10 378 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 TRPV2Q9Y5S1 764 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 CCND3P30281 292 aaPredicted RBP10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 OR1G1P47890 313 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 CCDC122Q5T0U0 273 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 GOLGA6L1Q8N7Z2 621 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 OR8K1Q8NGG5 319 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 MROH7Q68CQ1 1323 aa10.23□□□□□ -0.77
GAPVD1-219ENST00000495955 KIF2AO00139 706 aaPredicted RBP10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 SPOPO43791 374 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 CCL5P13501 91 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 ABCB4P21439 1286 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 GUCY2CP25092 1073 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 RNASE9P60153 205 aaKnown RBP10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 TSPY1Q01534 308 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 KCNH2Q12809 1159 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 OLFML2BQ68BL8 750 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 ZSCAN30Q86W11 494 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 HVCN1Q96D96 273 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 YME1L1Q96TA2 773 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 IMPACTQ9P2X3 320 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 UBE4BO95155 1302 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 MYH1P12882 1939 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 TM4SF4P48230 202 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 MTHFD1LQ6UB35 978 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 SRGAP1Q7Z6B7 1085 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 ZNF560Q96MR9 790 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 KCNA2P16389 499 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 UGCGQ16739 394 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 KRT39Q6A163 491 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 ZNF467Q7Z7K2 595 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms