RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 AGMOQ6ZNB7 445 aa9.24□□□□□ -0.93
APP-216ENST00000491395 HFE2Q6ZVN8 426 aa9.24□□□□□ -0.93
APP-216ENST00000491395 ASAP3Q8TDY4 903 aa9.24□□□□□ -0.93
APP-216ENST00000491395 TCP11Q8WWU5 503 aa9.24□□□□□ -0.93
APP-216ENST00000491395 MTMR9Q96QG7 549 aa9.24□□□□□ -0.93
APP-216ENST00000491395 MTRQ99707 1265 aa9.24□□□□□ -0.93
APP-216ENST00000491395 VN1R3Q9BXE9 311 aa9.24□□□□□ -0.93
APP-216ENST00000491395 ZBP1Q9H171 429 aa9.24□□□□□ -0.93
APP-216ENST00000491395 TMEM60Q9H2L4 133 aa9.24□□□□□ -0.93
APP-216ENST00000491395 RNF39Q9H2S5 420 aa9.24□□□□□ -0.93
APP-216ENST00000491395 TTC12Q9H892 705 aaPredicted RBP9.24□□□□□ -0.93
APP-216ENST00000491395 HCFC2Q9Y5Z7 792 aa9.24□□□□□ -0.93
APP-216ENST00000491395 MYH9P35579 1960 aaKnown RBP9.24□□□□□ -0.93
APP-216ENST00000491395 FNDC1Q4ZHG4 1894 aaPredicted RBP9.23□□□□□ -0.93
APP-216ENST00000491395 ATG2AQ2TAZ0 1938 aa9.23□□□□□ -0.93
APP-216ENST00000491395 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.23□□□□□ -0.93
APP-216ENST00000491395 GAS2O43903 313 aaKnown RBP9.23□□□□□ -0.93
APP-216ENST00000491395 NEMFO60524 1076 aa9.23□□□□□ -0.93
APP-216ENST00000491395 TSPAN1O60635 241 aa9.23□□□□□ -0.93
APP-216ENST00000491395 POMCP01189 267 aa9.23□□□□□ -0.93
APP-216ENST00000491395 EPCAMP16422 314 aa9.23□□□□□ -0.93
APP-216ENST00000491395 HOXB8P17481 243 aaPredicted RBP9.23□□□□□ -0.93
APP-216ENST00000491395 SP100P23497 879 aaPredicted RBP9.23□□□□□ -0.93
APP-216ENST00000491395 ARL2P36404 184 aa9.23□□□□□ -0.93
APP-216ENST00000491395 PTENP60484 403 aa9.23□□□□□ -0.93
APP-216ENST00000491395 ZXDAP98168 799 aa9.23□□□□□ -0.93
APP-216ENST00000491395 TRIM29Q14134 588 aa9.23□□□□□ -0.93
APP-216ENST00000491395 TRIM67Q6ZTA4 783 aa9.23□□□□□ -0.93
APP-216ENST00000491395 DDX53Q86TM3 631 aaKnown RBP9.23□□□□□ -0.93
APP-216ENST00000491395 C12orf76Q8N812 135 aaPredicted RBP9.23□□□□□ -0.93
APP-216ENST00000491395 SMG8Q8ND04 991 aaKnown RBP9.23□□□□□ -0.93
APP-216ENST00000491395 URGCPQ8TCY9 931 aa9.23□□□□□ -0.93
APP-216ENST00000491395 PIGOQ8TEQ8 1089 aa9.23□□□□□ -0.93
APP-216ENST00000491395 RSPH1Q8WYR4 309 aa9.23□□□□□ -0.93
APP-216ENST00000491395 CASP10Q92851 521 aa9.23□□□□□ -0.93
APP-216ENST00000491395 CPB2Q96IY4 423 aa9.23□□□□□ -0.93
APP-216ENST00000491395 EIF2AQ9BY44 585 aaKnown RBP9.23□□□□□ -0.93
APP-216ENST00000491395 RSAD1Q9HA92 442 aa9.23□□□□□ -0.93
APP-216ENST00000491395 ANKEF1Q9NU02 776 aa9.23□□□□□ -0.93
APP-216ENST00000491395 KIAA1671Q9BY89 1806 aa9.23□□□□□ -0.93
APP-216ENST00000491395 TMEM221A6NGB7 291 aa9.22□□□□□ -0.93
APP-216ENST00000491395 POTEMA6NI47 508 aa9.22□□□□□ -0.93
APP-216ENST00000491395 INO80B-WBP1J3KQ70 363 aa9.22□□□□□ -0.93
APP-216ENST00000491395 M0R296 226 aa9.22□□□□□ -0.93
APP-216ENST00000491395 TULP1O00294 542 aaPredicted RBP9.22□□□□□ -0.93
APP-216ENST00000491395 DGAT1O75907 488 aa9.22□□□□□ -0.93
APP-216ENST00000491395 ERLIN2O94905 339 aa9.22□□□□□ -0.93
APP-216ENST00000491395 ALDH2P05091 517 aa9.22□□□□□ -0.93
APP-216ENST00000491395 SSBP05455 408 aaKnown RBP eCLIP9.22□□□□□ -0.93
APP-216ENST00000491395 WEE2P0C1S8 567 aa9.22□□□□□ -0.93
APP-216ENST00000491395 SPATA31C1P0DKV0 1188 aa9.22□□□□□ -0.93
APP-216ENST00000491395 CTSAP10619 480 aa9.22□□□□□ -0.93
APP-216ENST00000491395 ITGA4P13612 1032 aa9.22□□□□□ -0.93
APP-216ENST00000491395 NCLP19338 710 aaKnown RBP9.22□□□□□ -0.93
APP-216ENST00000491395 GLRA2P23416 452 aa9.22□□□□□ -0.93
APP-216ENST00000491395 MCM7P33993 719 aa9.22□□□□□ -0.93
APP-216ENST00000491395 RARRES1P49788 294 aa9.22□□□□□ -0.93
APP-216ENST00000491395 MBTD1Q05BQ5 628 aa9.22□□□□□ -0.93
APP-216ENST00000491395 CAPSQ13938 189 aa9.22□□□□□ -0.93
APP-216ENST00000491395 TFDP1Q14186 410 aa9.22□□□□□ -0.93
APP-216ENST00000491395 MXD4Q14582 209 aaPredicted RBP9.22□□□□□ -0.93
APP-216ENST00000491395 BMS1Q14692 1282 aaKnown RBP9.22□□□□□ -0.93
APP-216ENST00000491395 PTPN14Q15678 1187 aa9.22□□□□□ -0.93
APP-216ENST00000491395 AMHR2Q16671 573 aa9.22□□□□□ -0.93
APP-216ENST00000491395 TPRNQ4KMQ1 711 aa9.22□□□□□ -0.93
APP-216ENST00000491395 RARS2Q5T160 578 aaKnown RBP9.22□□□□□ -0.93
APP-216ENST00000491395 CCDC83Q8IWF9 413 aa9.22□□□□□ -0.93
APP-216ENST00000491395 TMEM87AQ8NBN3 555 aa9.22□□□□□ -0.93
APP-216ENST00000491395 FEZF2Q8TBJ5 459 aa9.22□□□□□ -0.93
APP-216ENST00000491395 SLC22A17Q8WUG5 538 aa9.22□□□□□ -0.93
APP-216ENST00000491395 MFSD14AQ96MC6 490 aa9.22□□□□□ -0.93
APP-216ENST00000491395 ADAM7Q9H2U9 754 aa9.22□□□□□ -0.93
APP-216ENST00000491395 MIOSQ9NXC5 875 aa9.22□□□□□ -0.93
APP-216ENST00000491395 KANSL3Q9P2N6 904 aa9.22□□□□□ -0.93
APP-216ENST00000491395 LIMCH1Q9UPQ0 1083 aa9.22□□□□□ -0.93
APP-216ENST00000491395 FAN1Q9Y2M0 1017 aa9.22□□□□□ -0.93
APP-216ENST00000491395 HES2Q9Y543 173 aa9.22□□□□□ -0.93
APP-216ENST00000491395 IPPQ9Y573 584 aa9.22□□□□□ -0.93
APP-216ENST00000491395 CNTNAP2Q9UHC6 1331 aa9.22□□□□□ -0.93
APP-216ENST00000491395 PLXNA4Q9HCM2 1894 aa9.21□□□□□ -0.93
APP-216ENST00000491395 ARL5CA6NH57 179 aa9.21□□□□□ -0.94
APP-216ENST00000491395 NRP1O14786 923 aa9.21□□□□□ -0.94
APP-216ENST00000491395 B4GALT5O43286 388 aa9.21□□□□□ -0.94
APP-216ENST00000491395 USO1O60763 962 aaKnown RBP9.21□□□□□ -0.94
APP-216ENST00000491395 EIF5BO60841 1220 aaKnown RBP9.21□□□□□ -0.94
APP-216ENST00000491395 XRCC6P12956 609 aaKnown RBP eCLIP9.21□□□□□ -0.94
APP-216ENST00000491395 HOXD11P31277 338 aaPredicted RBP9.21□□□□□ -0.94
APP-216ENST00000491395 ITIH3Q06033 890 aa9.21□□□□□ -0.94
APP-216ENST00000491395 POU5F1BQ06416 359 aa9.21□□□□□ -0.94
APP-216ENST00000491395 NCBP1Q09161 790 aaKnown RBP9.21□□□□□ -0.94
APP-216ENST00000491395 SAFBQ15424 915 aaKnown RBP eCLIP9.21□□□□□ -0.94
APP-216ENST00000491395 ZNF174Q15697 407 aa9.21□□□□□ -0.94
APP-216ENST00000491395 CES5AQ6NT32 575 aa9.21□□□□□ -0.94
APP-216ENST00000491395 NOTUMQ6P988 496 aa9.21□□□□□ -0.94
APP-216ENST00000491395 MAEAQ7L5Y9 396 aa9.21□□□□□ -0.94
APP-216ENST00000491395 TAS1R1Q7RTX1 841 aa9.21□□□□□ -0.94
APP-216ENST00000491395 CDR2LQ86X02 465 aaPredicted RBP9.21□□□□□ -0.94
APP-216ENST00000491395 CATSPER3Q86XQ3 398 aa9.21□□□□□ -0.94
APP-216ENST00000491395 IFNLR1Q8IU57 520 aaPredicted RBP9.21□□□□□ -0.94
APP-216ENST00000491395 CNNM3Q8NE01 707 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms