RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 HNRNPH1P31943 449 aaKnown RBP12.13□□□□□ -0.47
SMPD4-218ENST00000482171 CCNI2Q6ZMN8 369 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-218ENST00000482171 CATSPER4Q7RTX7 472 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 FRMD5Q7Z6J6 570 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 NLRP14Q86W24 1093 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 PNMA5Q96PV4 448 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 C11orf70Q9BRQ4 267 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 DNAJC17Q9NVM6 304 aaKnown RBP12.13□□□□□ -0.47
SMPD4-218ENST00000482171 NUB1Q9Y5A7 615 aa12.13□□□□□ -0.47
SMPD4-218ENST00000482171 PRKCEQ02156 737 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 DGKZQ13574 1117 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 RBM46Q8TBY0 533 aaKnown RBP12.12□□□□□ -0.47
SMPD4-218ENST00000482171 VCXQ9H320 206 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 VIPAS39Q9H9C1 493 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 VPS37BQ9H9H4 285 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 SMARCAL1Q9NZC9 954 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 HSPBP1Q9NZL4 362 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 TMEM150BA6NC51 233 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 BACE1P56817 501 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 TKFCQ3LXA3 575 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 SLFN12LQ6IEE8 588 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 VPS52Q8N1B4 723 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 KIAA0895Q8NCT3 520 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 RIT2Q99578 217 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 ELAC2Q9BQ52 826 aaKnown RBP12.12□□□□□ -0.47
SMPD4-218ENST00000482171 CNOT8Q9UFF9 292 aaKnown RBP12.12□□□□□ -0.47
SMPD4-218ENST00000482171 DAAM1Q9Y4D1 1078 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 ATRNO75882 1429 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 TLR3O15455 904 aaKnown RBP12.12□□□□□ -0.47
SMPD4-218ENST00000482171 FTLP02792 175 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-218ENST00000482171 SARSP49591 514 aaKnown RBP12.12□□□□□ -0.47
SMPD4-218ENST00000482171 SEC24CP53992 1094 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 ERVK-24P63145 666 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 MYO1EQ12965 1108 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 KRT39Q6A163 491 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 GLIS3Q8NEA6 775 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 PDGFDQ9GZP0 370 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-218ENST00000482171 TXNDC16Q9P2K2 825 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 RNF14Q9UBS8 474 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 CHORDC1Q9UHD1 332 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-218ENST00000482171 ANAPC7Q9UJX3 599 aa12.12□□□□□ -0.47
SMPD4-218ENST00000482171 AGO2Q9UKV8 859 aaKnown RBP12.12□□□□□ -0.47
SMPD4-218ENST00000482171 CYP26A1O43174 497 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 SMIM24O75264 130 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 SUN1O94901 812 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 KRT81Q14533 505 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 TTLL4Q14679 1199 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 IL17AQ16552 155 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 DNAJC24Q6P3W2 148 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 CASC4Q6P4E1 433 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 LRRC71Q8N4P6 559 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 GMCL1P1Q8NEA9 526 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 KCND1Q9NSA2 647 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 RBAKQ9NYW8 714 aaPredicted RBP12.11□□□□□ -0.47
SMPD4-218ENST00000482171 TPX2Q9ULW0 747 aaKnown RBP12.11□□□□□ -0.47
SMPD4-218ENST00000482171 SUFUQ9UMX1 484 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 COMMD10Q9Y6G5 202 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 GMNCA6NCL1 334 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 CAPN9O14815 690 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 PPP1R37O75864 691 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 TGFB2P61812 414 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 SGO2Q562F6 1265 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 RSRC2Q7L4I2 434 aaKnown RBP12.11□□□□□ -0.47
SMPD4-218ENST00000482171 PACS2Q86VP3 889 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 RSAD2Q8WXG1 361 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 FAM237AA0A1B0GTK4 181 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 ATP2A2P16615 1042 aaKnown RBP12.11□□□□□ -0.47
SMPD4-218ENST00000482171 FMO5P49326 533 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 HADHQ16836 314 aaKnown RBP12.11□□□□□ -0.47
SMPD4-218ENST00000482171 HHATQ5VTY9 493 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 HEMGNQ9BXL5 484 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 ADAM22Q9P0K1 906 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 PPP1R9AQ9ULJ8 1098 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 DUSP10Q9Y6W6 482 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 PGK2P07205 417 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 ZNF18P17022 549 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 SOX10P56693 466 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 BFSP1Q12934 665 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 RBBP5Q15291 538 aaKnown RBP12.11□□□□□ -0.47
SMPD4-218ENST00000482171 XKR3Q5GH77 459 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 HAUS1Q96CS2 278 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 RPS6KC1Q96S38 1066 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 DDX47Q9H0S4 455 aaKnown RBP12.11□□□□□ -0.47
SMPD4-218ENST00000482171 BLOC1S4Q9NUP1 217 aa12.11□□□□□ -0.47
SMPD4-218ENST00000482171 LRRD1A4D1F6 860 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 DGAT1O75907 488 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 MAGOHP61326 146 aaKnown RBP12.1□□□□□ -0.47
SMPD4-218ENST00000482171 GIT2Q14161 759 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 EDRF1Q3B7T1 1238 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 SEZ6Q53EL9 994 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 FAM83AQ86UY5 434 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 DNAAF5Q86Y56 855 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMPD4-218ENST00000482171 HEXIM2Q96MH2 286 aaKnown RBP12.1□□□□□ -0.47
SMPD4-218ENST00000482171 CALN1Q9BXU9 219 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 ANKZF1Q9H8Y5 726 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 PITPNM2Q9BZ72 1349 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 PARP4Q9UKK3 1724 aaKnown RBP12.1□□□□□ -0.47
SMPD4-218ENST00000482171 RGPD1P0DJD0 1748 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 TARSL2A2RTX5 802 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms