RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 CNTFP26441 200 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 ECI1P42126 302 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 STAT5AP42229 794 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 ARL4DP49703 201 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 ITGA8P53708 1063 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 POLE2P56282 527 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 RNF4P78317 190 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 GPLD1P80108 840 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 MRPS35P82673 323 aaKnown RBP3.24□□□□□ -1.89
HMGN4-202ENST00000477243 SMAD3P84022 425 aaKnown RBP3.24□□□□□ -1.89
HMGN4-202ENST00000477243 AMPD2Q01433 879 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 ALDH6A1Q02252 535 aaKnown RBP3.24□□□□□ -1.89
HMGN4-202ENST00000477243 NRG1Q02297 640 aaPredicted RBP3.24□□□□□ -1.89
HMGN4-202ENST00000477243 AUHQ13825 339 aaKnown RBP3.24□□□□□ -1.89
HMGN4-202ENST00000477243 SCARB2Q14108 478 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 LRP8Q14114 963 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 LBRQ14739 615 aaKnown RBP3.24□□□□□ -1.89
HMGN4-202ENST00000477243 TAF5Q15542 800 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 SMAD2Q15796 467 aaKnown RBP3.24□□□□□ -1.89
HMGN4-202ENST00000477243 CRY1Q16526 586 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 FAM110CQ1W6H9 321 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 ZC3H12AQ5D1E8 599 aaKnown RBP3.24□□□□□ -1.89
HMGN4-202ENST00000477243 HP1BP3Q5SSJ5 553 aaPredicted RBP3.24□□□□□ -1.89
HMGN4-202ENST00000477243 ZMYM1Q5SVZ6 1142 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 THEMIS2Q5TEJ8 643 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 HAUS3Q68CZ6 603 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 KCNT2Q6UVM3 1135 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 RAPH1Q70E73 1250 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 OTOP1Q7RTM1 612 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 OVCH1Q7RTY7 1134 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 GALNTL5Q7Z4T8 443 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 HID1Q8IV36 788 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 MRPL41Q8IXM3 137 aaKnown RBP3.24□□□□□ -1.89
HMGN4-202ENST00000477243 CMIPQ8IY22 773 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 THEMISQ8N1K5 641 aaPredicted RBP3.24□□□□□ -1.89
HMGN4-202ENST00000477243 CCDC33Q8N5R6 958 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 TRIML1Q8N9V2 468 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 PCDH19Q8TAB3 1148 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 SYTL5Q8TDW5 730 aaPredicted RBP3.24□□□□□ -1.89
HMGN4-202ENST00000477243 RUBCNQ92622 972 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 BRF1Q92994 677 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 FBXW5Q969U6 566 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 ZNF566Q969W8 418 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 COA7Q96BR5 231 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 ASIC4Q96FT7 647 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 C1orf159Q96HA4 380 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 CFAP53Q96M91 514 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 PPP1R9BQ96SB3 815 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 CGRRF1Q99675 332 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 SLF1Q9BQI6 1058 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 CNPPD1Q9BV87 410 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 KATNAL1Q9BW62 490 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 EIF2AQ9BY44 585 aaKnown RBP3.24□□□□□ -1.89
HMGN4-202ENST00000477243 SENP6Q9GZR1 1112 aaPredicted RBP3.24□□□□□ -1.89
HMGN4-202ENST00000477243 ABCG4Q9H172 646 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 MAGEH1Q9H213 219 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 ZNF287Q9HBT7 754 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 GP6Q9HCN6 339 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 POLMQ9NP87 494 aaPredicted RBP3.24□□□□□ -1.89
HMGN4-202ENST00000477243 HAUS2Q9NVX0 235 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 TOR4AQ9NXH8 423 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 GGA3Q9NZ52 723 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 KIF17Q9P2E2 1029 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 WDR35Q9P2L0 1181 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 ANKFY1Q9P2R3 1169 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 GRHPRQ9UBQ7 328 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 VPS28Q9UK41 221 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 DENND2AQ9ULE3 1009 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 SOX13Q9UN79 622 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 AGTPBP1Q9UPW5 1226 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 CORO2BQ9UQ03 480 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 SF3B6Q9Y3B4 125 aaKnown RBP3.24□□□□□ -1.89
HMGN4-202ENST00000477243 NPFFR2Q9Y5X5 522 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 FHOD1Q9Y613 1164 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 COL6A5A8TX70 2615 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 ADGRB2O60241 1585 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.24□□□□□ -1.895e-7■■■■■ 29.7
HMGN4-202ENST00000477243 VIRMAQ69YN4 1812 aaKnown RBP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 FBN2P35556 2912 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 CENPFP49454 3210 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 CEP250Q9BV73 2442 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 PASKQ96RG2 1323 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 PXDNLA1KZ92 1463 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 A0A088AWK7 358 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 CCDC66A2RUB6 948 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 PI4KAP2A4QPH2 592 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 ISM1B1AKI9 464 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 GOLGA6L22H0YM25 854 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 FYB1O15117 783 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 FANCGO15287 622 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 KDM1AO60341 852 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 TADA3O75528 432 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 B3GALNT1O75752 331 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 TSPAN9O75954 239 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 URI1O94763 535 aaPredicted RBP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 UPP2O95045 317 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 ITGBL1O95965 494 aaPredicted RBP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 PLATP00750 562 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 ALDH2P05091 517 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 CYP17A1P05093 508 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms