RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 F8W810 466 aa13.02□□□□□ -0.33
VARS2-208ENST00000477052 SLITRK3O94933 977 aa13.02□□□□□ -0.33
VARS2-208ENST00000477052 ATP2B1P20020 1258 aa13.02□□□□□ -0.33
VARS2-208ENST00000477052 VCPP55072 806 aaKnown RBP13.02□□□□□ -0.33
VARS2-208ENST00000477052 GUCY1B3Q02153 619 aa13.02□□□□□ -0.33
VARS2-208ENST00000477052 TAS1R1Q7RTX1 841 aa13.02□□□□□ -0.33
VARS2-208ENST00000477052 ZBTB33Q86T24 672 aa13.02□□□□□ -0.33
VARS2-208ENST00000477052 DDX53Q86TM3 631 aaKnown RBP13.02□□□□□ -0.33
VARS2-208ENST00000477052 FERMT3Q86UX7 667 aa13.02□□□□□ -0.33
VARS2-208ENST00000477052 CDR2LQ86X02 465 aaPredicted RBP13.02□□□□□ -0.33
VARS2-208ENST00000477052 C4orf19Q8IY42 314 aa13.02□□□□□ -0.33
VARS2-208ENST00000477052 TMEM87AQ8NBN3 555 aa13.02□□□□□ -0.33
VARS2-208ENST00000477052 SMG8Q8ND04 991 aaKnown RBP13.02□□□□□ -0.33
VARS2-208ENST00000477052 ASAP3Q8TDY4 903 aa13.02□□□□□ -0.33
VARS2-208ENST00000477052 EIF2AK1Q9BQI3 630 aaKnown RBP13.02□□□□□ -0.33
VARS2-208ENST00000477052 JPH2Q9BR39 696 aaPredicted RBP13.02□□□□□ -0.33
VARS2-208ENST00000477052 TRAIPQ9BWF2 469 aa13.02□□□□□ -0.33
VARS2-208ENST00000477052 APOL6Q9BWW8 343 aa13.02□□□□□ -0.33
VARS2-208ENST00000477052 C2CD2LO14523 706 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 ZNF623O75123 536 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 SEC24BO95487 1268 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 ASGR2P07307 311 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 SKIP12755 728 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 HOXB8P17481 243 aaPredicted RBP13.01□□□□□ -0.33
VARS2-208ENST00000477052 RFC5P40937 340 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 TXKP42681 527 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 MRE11P49959 708 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 RAB27AP51159 221 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 ST3GAL1Q11201 340 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 CALCRLQ16602 461 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 PTPN21Q16825 1174 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 TPRNQ4KMQ1 711 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 TMC5Q6UXY8 1006 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 MAEAQ7L5Y9 396 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 SRGAP1Q7Z6B7 1085 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 MRPL10Q7Z7H8 261 aaKnown RBP13.01□□□□□ -0.33
VARS2-208ENST00000477052 FAM177A1Q8N128 213 aaPredicted RBP13.01□□□□□ -0.33
VARS2-208ENST00000477052 KREMEN2Q8NCW0 462 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 NSUN7Q8NE18 718 aaKnown RBP13.01□□□□□ -0.33
VARS2-208ENST00000477052 PIGOQ8TEQ8 1089 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 SLC22A17Q8WUG5 538 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 RABGGTAQ92696 567 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 GTF3C6Q969F1 213 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 PGBD4Q96DM1 585 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 ASIC4Q96FT7 647 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 MTRQ99707 1265 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 ADAM7Q9H2U9 754 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 ZSWIM4Q9H7M6 989 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 RSAD1Q9HA92 442 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 MIOSQ9NXC5 875 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 PRG3Q9Y2Y8 225 aaPredicted RBP13.01□□□□□ -0.33
VARS2-208ENST00000477052 ARID2Q68CP9 1835 aa13.01□□□□□ -0.33
VARS2-208ENST00000477052 FSD2A1L4K1 749 aa13□□□□□ -0.33
VARS2-208ENST00000477052 INO80B-WBP1J3KQ70 363 aa13□□□□□ -0.33
VARS2-208ENST00000477052 NRP1O14786 923 aa13□□□□□ -0.33
VARS2-208ENST00000477052 TBX3O15119 743 aa13□□□□□ -0.33
VARS2-208ENST00000477052 B4GALT5O43286 388 aa13□□□□□ -0.33
VARS2-208ENST00000477052 TSPAN1O60635 241 aa13□□□□□ -0.33
VARS2-208ENST00000477052 DKC1O60832 514 aaKnown RBP eCLIP13□□□□□ -0.33
VARS2-208ENST00000477052 BAG4O95429 457 aaKnown RBP13□□□□□ -0.33
VARS2-208ENST00000477052 CTSAP10619 480 aa13□□□□□ -0.33
VARS2-208ENST00000477052 SIGLEC14Q08ET2 396 aa13□□□□□ -0.33
VARS2-208ENST00000477052 PTPN14Q15678 1187 aa13□□□□□ -0.33
VARS2-208ENST00000477052 CES5AQ6NT32 575 aa13□□□□□ -0.33
VARS2-208ENST00000477052 OTUD6AQ7L8S5 288 aa13□□□□□ -0.33
VARS2-208ENST00000477052 DIS3L2Q8IYB7 885 aaKnown RBP13□□□□□ -0.33
VARS2-208ENST00000477052 SLFN12Q8IYM2 578 aa13□□□□□ -0.33
VARS2-208ENST00000477052 URGCPQ8TCY9 931 aa13□□□□□ -0.33
VARS2-208ENST00000477052 ZFP42Q96MM3 310 aa13□□□□□ -0.33
VARS2-208ENST00000477052 TMEM60Q9H2L4 133 aa13□□□□□ -0.33
VARS2-208ENST00000477052 TTC12Q9H892 705 aaPredicted RBP13□□□□□ -0.33
VARS2-208ENST00000477052 GPRC5CQ9NQ84 441 aa13□□□□□ -0.33
VARS2-208ENST00000477052 PPP4R2Q9NY27 417 aa13□□□□□ -0.33
VARS2-208ENST00000477052 CACNG4Q9UBN1 327 aa13□□□□□ -0.33
VARS2-208ENST00000477052 PCDHA12Q9UN75 941 aa13□□□□□ -0.33
VARS2-208ENST00000477052 IPPQ9Y573 584 aa13□□□□□ -0.33
VARS2-208ENST00000477052 ZDBF2Q9HCK1 2354 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 POTEMA6NI47 508 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 ERLIN2O94905 339 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 BRD1O95696 1058 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 CNPP09543 421 aaKnown RBP12.99□□□□□ -0.33
VARS2-208ENST00000477052 ITGA4P13612 1032 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 KLRC2P26717 231 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 MLH1P40692 756 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 OR1G1P47890 313 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 NEK4P51957 841 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 CAPSQ13938 189 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 ANKRD1Q15327 319 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 BMP8AQ7Z5Y6 402 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 SUGP1Q8IWZ8 645 aaKnown RBP12.99□□□□□ -0.33
VARS2-208ENST00000477052 FBXL6Q8N531 539 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 TCP11Q8WWU5 503 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 WASF1Q92558 559 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 B3GALT6Q96L58 329 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 KLHL5Q96PQ7 755 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 FAM193BQ96PV7 902 aaPredicted RBP12.99□□□□□ -0.33
VARS2-208ENST00000477052 GAD1Q99259 594 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 NAP1L4Q99733 375 aaKnown RBP12.99□□□□□ -0.33
VARS2-208ENST00000477052 HSD17B14Q9BPX1 270 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 FAM86C1Q9NVL1 165 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms