RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 ADALQ6DHV7 355 aa25.71■■□□□ 1.71
SUMO3-205ENST00000466861 FIBCD1Q8N539 461 aa25.71■■□□□ 1.71
SUMO3-205ENST00000466861 IQUBQ8NA54 791 aa25.71■■□□□ 1.71
SUMO3-205ENST00000466861 PGBD4Q96DM1 585 aa25.71■■□□□ 1.71
SUMO3-205ENST00000466861 LRRC27Q9C0I9 530 aa25.71■■□□□ 1.71
SUMO3-205ENST00000466861 KMT5AQ9NQR1 393 aa25.71■■□□□ 1.71
SUMO3-205ENST00000466861 A0A1B0GUA9 196 aa25.7■■□□□ 1.7
SUMO3-205ENST00000466861 K7ERI5 159 aa25.7■■□□□ 1.7
SUMO3-205ENST00000466861 ARF4P18085 180 aaPredicted RBP25.7■■□□□ 1.7
SUMO3-205ENST00000466861 GIT2Q14161 759 aa25.7■■□□□ 1.7
SUMO3-205ENST00000466861 Q7L0L9 218 aa25.7■■□□□ 1.7
SUMO3-205ENST00000466861 MRPL10Q7Z7H8 261 aaKnown RBP25.7■■□□□ 1.7
SUMO3-205ENST00000466861 CLP1Q92989 425 aaKnown RBP25.7■■□□□ 1.7
SUMO3-205ENST00000466861 REEP2Q9BRK0 252 aa25.7■■□□□ 1.7
SUMO3-205ENST00000466861 TMEM117Q9H0C3 514 aa25.7■■□□□ 1.7
SUMO3-205ENST00000466861 MAGEF1Q9HAY2 307 aa25.7■■□□□ 1.7
SUMO3-205ENST00000466861 A0A087X0B3 334 aa25.69■■□□□ 1.7
SUMO3-205ENST00000466861 CCDC169A6NNP5 214 aa25.69■■□□□ 1.7
SUMO3-205ENST00000466861 PRKCBP05771 671 aa25.69■■□□□ 1.7
SUMO3-205ENST00000466861 BTG3Q14201 252 aaPredicted RBP25.69■■□□□ 1.7
SUMO3-205ENST00000466861 E2F4Q16254 413 aa25.69■■□□□ 1.7
SUMO3-205ENST00000466861 SLC17A8Q8NDX2 589 aa25.69■■□□□ 1.7
SUMO3-205ENST00000466861 TNMDQ9H2S6 317 aa25.69■■□□□ 1.7
SUMO3-205ENST00000466861 PARVGQ9HBI0 331 aa25.69■■□□□ 1.7
SUMO3-205ENST00000466861 PCDHB2Q9Y5E7 798 aa25.69■■□□□ 1.7
SUMO3-205ENST00000466861 NLRC5Q86WI3 1866 aa25.68■■□□□ 1.7
SUMO3-205ENST00000466861 FAM13AO94988 1023 aa25.68■■□□□ 1.7
SUMO3-205ENST00000466861 KRT18P05783 430 aaKnown RBP25.68■■□□□ 1.7
SUMO3-205ENST00000466861 ATF7P17544 494 aaPredicted RBP25.68■■□□□ 1.7
SUMO3-205ENST00000466861 CMA1P23946 247 aa25.68■■□□□ 1.7
SUMO3-205ENST00000466861 PRPF4BQ13523 1007 aaKnown RBP25.68■■□□□ 1.7
SUMO3-205ENST00000466861 DHX8Q14562 1220 aaKnown RBP25.68■■□□□ 1.7
SUMO3-205ENST00000466861 UBXN11Q5T124 520 aa25.68■■□□□ 1.7
SUMO3-205ENST00000466861 SLC27A1Q6PCB7 646 aa25.68■■□□□ 1.7
SUMO3-205ENST00000466861 POLD4Q9HCU8 107 aa25.68■■□□□ 1.7
SUMO3-205ENST00000466861 UBN1Q9NPG3 1134 aa25.68■■□□□ 1.7
SUMO3-205ENST00000466861 N4BP3O15049 544 aa25.67■■□□□ 1.7
SUMO3-205ENST00000466861 TBCAO75347 108 aaKnown RBP25.67■■□□□ 1.7
SUMO3-205ENST00000466861 ARHGEF15O94989 841 aa25.67■■□□□ 1.7
SUMO3-205ENST00000466861 RB1P06400 928 aa25.67■■□□□ 1.7
SUMO3-205ENST00000466861 NCKAP1LP55160 1127 aa25.67■■□□□ 1.7
SUMO3-205ENST00000466861 AMPD3Q01432 767 aa25.67■■□□□ 1.7
SUMO3-205ENST00000466861 RAD51AP2Q09MP3 1159 aa25.67■■□□□ 1.7
SUMO3-205ENST00000466861 GRIN2CQ14957 1233 aa25.67■■□□□ 1.7
SUMO3-205ENST00000466861 APBB1IPQ7Z5R6 666 aaPredicted RBP25.67■■□□□ 1.7
SUMO3-205ENST00000466861 HACE1Q8IYU2 909 aa25.67■■□□□ 1.7
SUMO3-205ENST00000466861 ABI1Q8IZP0 508 aa25.67■■□□□ 1.7
SUMO3-205ENST00000466861 PDILTQ8N807 584 aa25.67■■□□□ 1.7
SUMO3-205ENST00000466861 GUCD1Q96NT3 240 aa25.67■■□□□ 1.7
SUMO3-205ENST00000466861 KBTBD4Q9NVX7 518 aa25.67■■□□□ 1.7
SUMO3-205ENST00000466861 SEL1LQ9UBV2 794 aa25.67■■□□□ 1.7
SUMO3-205ENST00000466861 ZMYM2Q9UBW7 1377 aa25.67■■□□□ 1.7
SUMO3-205ENST00000466861 NPHP3-ACAD11A0A0J9YXS1 232 aa25.66■■□□□ 1.7
SUMO3-205ENST00000466861 CARNS1A5YM72 827 aa25.66■■□□□ 1.7
SUMO3-205ENST00000466861 SFI1A8K8P3 1242 aa25.66■■□□□ 1.7
SUMO3-205ENST00000466861 MAPTP10636 758 aaKnown RBP25.66■■□□□ 1.7
SUMO3-205ENST00000466861 TMEM161BQ8NDZ6 487 aa25.66■■□□□ 1.7
SUMO3-205ENST00000466861 DDX12PQ92771 950 aa25.66■■□□□ 1.7
SUMO3-205ENST00000466861 CDX2Q99626 313 aaPredicted RBP25.66■■□□□ 1.7
SUMO3-205ENST00000466861 KIFC3Q9BVG8 833 aa25.66■■□□□ 1.7
SUMO3-205ENST00000466861 MRPL9Q9BYD2 267 aaKnown RBP25.66■■□□□ 1.7
SUMO3-205ENST00000466861 PANK2Q9BZ23 570 aa25.66■■□□□ 1.7
SUMO3-205ENST00000466861 RNF19AQ9NV58 838 aa25.66■■□□□ 1.7
SUMO3-205ENST00000466861 USP25Q9UHP3 1055 aa25.66■■□□□ 1.7
SUMO3-205ENST00000466861 FAM237AA0A1B0GTK4 181 aa25.65■■□□□ 1.7
SUMO3-205ENST00000466861 A0A1W2PQ27 194 aa25.65■■□□□ 1.7
SUMO3-205ENST00000466861 A0A1W2PQ64 194 aa25.65■■□□□ 1.7
SUMO3-205ENST00000466861 A0A1W2PQD8 194 aa25.65■■□□□ 1.7
SUMO3-205ENST00000466861 C5orf67F2Z3F1 127 aa25.65■■□□□ 1.7
SUMO3-205ENST00000466861 B4GALT5O43286 388 aa25.65■■□□□ 1.7
SUMO3-205ENST00000466861 GAP43P17677 238 aa25.65■■□□□ 1.7
SUMO3-205ENST00000466861 CNNM4Q6P4Q7 775 aa25.65■■□□□ 1.7
SUMO3-205ENST00000466861 DNAJC19Q96DA6 116 aa25.65■■□□□ 1.7
SUMO3-205ENST00000466861 CPB2Q96IY4 423 aa25.65■■□□□ 1.7
SUMO3-205ENST00000466861 FAM161BQ96MY7 647 aa25.65■■□□□ 1.7
SUMO3-205ENST00000466861 ADPGKQ9BRR6 497 aa25.65■■□□□ 1.7
SUMO3-205ENST00000466861 PLVAPQ9BX97 442 aa25.65■■□□□ 1.7
SUMO3-205ENST00000466861 MRPL4Q9BYD3 311 aaKnown RBP25.65■■□□□ 1.7
SUMO3-205ENST00000466861 KCNH3Q9ULD8 1083 aa25.65■■□□□ 1.7
SUMO3-205ENST00000466861 SZT2Q5T011 3432 aa25.65■■□□□ 1.7
SUMO3-205ENST00000466861 MYMKA6NI61 221 aa25.64■■□□□ 1.7
SUMO3-205ENST00000466861 TBKBP1A7MCY6 615 aa25.64■■□□□ 1.7
SUMO3-205ENST00000466861 SLC16A4O15374 487 aa25.64■■□□□ 1.7
SUMO3-205ENST00000466861 LINC00271P0C7V0 271 aa25.64■■□□□ 1.7
SUMO3-205ENST00000466861 FGFR1P11362 822 aa25.64■■□□□ 1.7
SUMO3-205ENST00000466861 POU3F3P20264 500 aaPredicted RBP25.64■■□□□ 1.7
SUMO3-205ENST00000466861 GLB1LQ6UWU2 654 aa25.64■■□□□ 1.7
SUMO3-205ENST00000466861 TMEM192Q8IY95 271 aa25.64■■□□□ 1.7
SUMO3-205ENST00000466861 MYCT1Q8N699 235 aa25.64■■□□□ 1.7
SUMO3-205ENST00000466861 DHX58Q96C10 678 aa25.64■■□□□ 1.7
SUMO3-205ENST00000466861 CASD1Q96PB1 797 aa25.64■■□□□ 1.7
SUMO3-205ENST00000466861 GAS2L1Q99501 681 aaPredicted RBP25.64■■□□□ 1.7
SUMO3-205ENST00000466861 TRIM6Q9C030 488 aaPredicted RBP25.64■■□□□ 1.7
SUMO3-205ENST00000466861 ST6GALNAC4Q9H4F1 302 aa25.64■■□□□ 1.7
SUMO3-205ENST00000466861 TNFSF13BQ9Y275 285 aa25.64■■□□□ 1.7
SUMO3-205ENST00000466861 POLR2DO15514 142 aaKnown RBP25.63■■□□□ 1.69
SUMO3-205ENST00000466861 TRAK2O60296 914 aa25.63■■□□□ 1.69
SUMO3-205ENST00000466861 BMPR1AP36894 532 aa25.63■■□□□ 1.69
SUMO3-205ENST00000466861 CACNB1Q02641 598 aaPredicted RBP25.63■■□□□ 1.69
SUMO3-205ENST00000466861 STRN3Q13033 797 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms