RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 TSPYL2Q9H2G4 693 aaPredicted RBP7.02□□□□□ -1.29
SF3B1-206ENST00000462613 AGO3Q9H9G7 860 aaKnown RBP7.02□□□□□ -1.29
SF3B1-206ENST00000462613 CDHR5Q9HBB8 845 aa7.02□□□□□ -1.29
SF3B1-206ENST00000462613 AGPAT5Q9NUQ2 364 aa7.02□□□□□ -1.29
SF3B1-206ENST00000462613 EXOC1Q9NV70 894 aa7.02□□□□□ -1.29
SF3B1-206ENST00000462613 RMND1Q9NWS8 449 aa7.02□□□□□ -1.29
SF3B1-206ENST00000462613 SERTAD1Q9UHV2 236 aa7.02□□□□□ -1.29
SF3B1-206ENST00000462613 HPSEQ9Y251 543 aa7.02□□□□□ -1.29
SF3B1-206ENST00000462613 PCDHB13Q9Y5F0 798 aa7.02□□□□□ -1.29
SF3B1-206ENST00000462613 PDCD11Q14690 1871 aaKnown RBP7.02□□□□□ -1.29
SF3B1-206ENST00000462613 CNTNAP2Q9UHC6 1331 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 A0A087X0B3 334 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 NPHP3-ACAD11A0A0J9YXS1 232 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 CARNS1A5YM72 827 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 SFI1A8K8P3 1242 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 ACKR2O00590 384 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 HNRNPDLO14979 420 aaKnown RBP7.01□□□□□ -1.29
SF3B1-206ENST00000462613 GTPBP6O43824 516 aaPredicted RBP7.01□□□□□ -1.29
SF3B1-206ENST00000462613 TLL1O43897 1013 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 CSDE1O75534 798 aaKnown RBP7.01□□□□□ -1.29
SF3B1-206ENST00000462613 UPP2O95045 317 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 GCNT3O95395 438 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 EOMESO95936 686 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 SARSP49591 514 aaKnown RBP7.01□□□□□ -1.29
SF3B1-206ENST00000462613 LIG4P49917 911 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 EPHB4P54760 987 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 MBTD1Q05BQ5 628 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 COASYQ13057 564 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 MAPK7Q13164 816 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 PSMD2Q13200 908 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 DCAF4L1Q3SXM0 396 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 ARSHQ5FYA8 562 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 FAM26FQ5R3K3 315 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 C9orf50Q5SZB4 431 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 ATF7IP2Q5U623 682 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 CNNM4Q6P4Q7 775 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 SLC27A1Q6PCB7 646 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 CLEC17AQ6ZS10 378 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 UNC13DQ70J99 1090 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 HAUS6Q7Z4H7 955 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 SFR1Q86XK3 245 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 NPAS4Q8IUM7 802 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 SYCP3Q8IZU3 236 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 PAGE5Q96GU1 130 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 YME1L1Q96TA2 773 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 C7orf25Q9BPX7 421 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 ELAC1Q9H777 363 aaKnown RBP7.01□□□□□ -1.29
SF3B1-206ENST00000462613 TMEM206Q9H813 350 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 UBN1Q9NPG3 1134 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 OLFML3Q9NRN5 406 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 RGS18Q9NS28 235 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 FAM105AQ9NUU6 356 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 TMEM161AQ9NX61 479 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 ARHGAP28Q9P2N2 729 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 COLQQ9Y215 455 aaPredicted RBP7.01□□□□□ -1.29
SF3B1-206ENST00000462613 INSL6Q9Y581 213 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 KIAA1671Q9BY89 1806 aa7.01□□□□□ -1.29
SF3B1-206ENST00000462613 TRIOBPQ9H2D6 2365 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 A0A0U1RQF3 1178 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 ENPP3O14638 875 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 CLDN3O15551 220 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 ACTN4O43707 911 aaKnown RBP7□□□□□ -1.29
SF3B1-206ENST00000462613 TSPAN1O60635 241 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 TOM1L1O75674 476 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 MBD3O95983 291 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 ARF4P18085 180 aaPredicted RBP7□□□□□ -1.29
SF3B1-206ENST00000462613 FGFR4P22455 802 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 YARSP54577 528 aaKnown RBP7□□□□□ -1.29
SF3B1-206ENST00000462613 NCKAP1LP55160 1127 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 SMAD3P84022 425 aaKnown RBP7□□□□□ -1.29
SF3B1-206ENST00000462613 STIM1Q13586 685 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 GPNMBQ14956 572 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 POSTNQ15063 836 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 KYAT1Q16773 422 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 LRIT3Q3SXY7 679 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 ZNF568Q3ZCX4 644 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 LONRF3Q496Y0 759 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 SLFN12LQ6IEE8 588 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 ZPBP2Q6X784 338 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 C16orf59Q7L2K0 433 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 HS2ST1Q7LGA3 356 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 HERC6Q8IVU3 1022 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 FMR1NBQ8N0W7 255 aaPredicted RBP7□□□□□ -1.29
SF3B1-206ENST00000462613 DAW1Q8N136 415 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 RNF169Q8NCN4 708 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 TMEM161BQ8NDZ6 487 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 URGCPQ8TCY9 931 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 BSNDQ8WZ55 320 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 SMARCE1Q969G3 411 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 TOP1MTQ969P6 601 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 DNAJC19Q96DA6 116 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 FAM193BQ96PV7 902 aaPredicted RBP7□□□□□ -1.29
SF3B1-206ENST00000462613 ACCSQ96QU6 501 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 RPS6KC1Q96S38 1066 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 RAD9AQ99638 391 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 KIFC3Q9BVG8 833 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 CCDC94Q9BW85 323 aaPredicted RBP7□□□□□ -1.29
SF3B1-206ENST00000462613 TRAIPQ9BWF2 469 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 MRPL9Q9BYD2 267 aaKnown RBP7□□□□□ -1.29
SF3B1-206ENST00000462613 BLZF1Q9H2G9 400 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms