RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 DYDC2Q96IM9 177 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 VEZTQ9HBM0 779 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 OLFML3Q9NRN5 406 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 DONSONQ9NYP3 566 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 SAMD15Q9P1V8 674 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 AFF2P51816 1311 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 TULP1O00294 542 aaPredicted RBP12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 UBOX5O94941 541 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 FTLP02792 175 aaPredicted RBP12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 PYGMP11217 842 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 EZRP15311 586 aaKnown RBP12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 COMTP21964 271 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 TCP10Q12799 353 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 AP3B2Q13367 1082 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 CNGA2Q16280 664 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 CDC42EP5Q6NZY7 148 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 TLDC1Q6P9B6 456 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 MOXD1Q6UVY6 613 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 CCDC50Q8IVM0 306 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 KAT5Q92993 513 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 NAP1L3Q99457 506 aaPredicted RBP12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 AGPAT1Q99943 283 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 WRAP73Q9P2S5 460 aaPredicted RBP12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 CTNNAL1Q9UBT7 734 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 RASAL2Q9UJF2 1139 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 USP21Q9UK80 565 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 DIS3Q9Y2L1 958 aaKnown RBP12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 A8MUI8 341 aa12.65□□□□□ -0.39
PDZRN3-203ENST00000462146 UBXN2AP68543 259 aa12.65□□□□□ -0.39
PDZRN3-203ENST00000462146 ITIH4Q14624 930 aa12.65□□□□□ -0.39
PDZRN3-203ENST00000462146 C1orf186Q6ZWK4 172 aa12.65□□□□□ -0.39
PDZRN3-203ENST00000462146 EXOC3L1Q86VI1 746 aa12.65□□□□□ -0.39
PDZRN3-203ENST00000462146 MAGEC3Q8TD91 643 aa12.65□□□□□ -0.39
PDZRN3-203ENST00000462146 ZSWIM1Q9BR11 485 aa12.65□□□□□ -0.39
PDZRN3-203ENST00000462146 AGPAT3Q9NRZ7 376 aa12.65□□□□□ -0.39
PDZRN3-203ENST00000462146 DNAJC17Q9NVM6 304 aaKnown RBP12.65□□□□□ -0.39
PDZRN3-203ENST00000462146 SYNGAP1Q96PV0 1343 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 HGSO14964 777 aaPredicted RBP12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 SLC26A4O43511 780 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 AGTP01019 485 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 CTNNA2P26232 953 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 SREBF1P36956 1147 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 ADCY2Q08462 1091 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 COL23A1Q86Y22 540 aaPredicted RBP12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 ZSWIM2Q8NEG5 633 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 LMO3Q8TAP4 145 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 PRCCQ92733 491 aaPredicted RBP12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 MIEF2Q96C03 454 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 WDR18Q9BV38 432 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 FGFR1OP2Q9NVK5 253 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 PFASO15067 1338 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 RASGRF2O14827 1237 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 TBX3O15119 743 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 SLITRK3O94933 977 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 ACSL3O95573 720 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 CHRNA3P32297 505 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 IKQ13123 557 aaPredicted RBP12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 KIF22Q14807 665 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 C6orf118Q5T5N4 469 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 RPAINQ86UA6 219 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 SIAH1Q8IUQ4 282 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 RPUSD2Q8IZ73 545 aaKnown RBP12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 CRAMP1Q96RY5 1269 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 PCDHB18PQ96TA0 734 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 PCIF1Q9H4Z3 704 aa12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 UBE2TQ9NPD8 197 aaPredicted RBP12.64□□□□□ -0.39
PDZRN3-203ENST00000462146 EIF3DO15371 548 aaKnown RBP eCLIP12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 RARAP10276 462 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 SLC8A1P32418 973 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 ZNF76P36508 570 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 PEX5P50542 639 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 DRG2P55039 364 aaKnown RBP12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 NCALDP61601 193 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 MAEAQ7L5Y9 396 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 CCDC105Q8IYK2 499 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 KIF2BQ8N4N8 673 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 ELMO3Q96BJ8 720 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 POLR3CQ9BUI4 534 aaPredicted RBP12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 AMNQ9BXJ7 453 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 ATP6V0A4Q9HBG4 840 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 PARVGQ9HBI0 331 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 PCYOX1Q9UHG3 505 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 CEP83Q9Y592 693 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 LTBP1Q14766 1721 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 C10orf71Q711Q0 1435 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 SNX3O60493 162 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 GDF11O95390 407 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 ALAS1P13196 640 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 CLNS1AP54105 237 aaKnown RBP12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 BFSP1Q12934 665 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 MYO1EQ12965 1108 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 VPS72Q15906 364 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 DOK7Q18PE1 504 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 TNFAIP8L3Q5GJ75 292 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 TRAPPC3LQ5T215 181 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 FAM196AQ6ZSG2 479 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 EP400NLQ6ZTU2 488 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 ZNF720Q7Z2F6 126 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 TAX1BP1Q86VP1 789 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 THOC1Q96FV9 657 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms