RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 FTHL17Q9BXU8 183 aa10.98□□□□□ -0.65
VPS45-204ENST00000460366 IFIH1Q9BYX4 1025 aaKnown RBP10.98□□□□□ -0.65
VPS45-204ENST00000460366 UBE2OQ9C0C9 1292 aaKnown RBP10.98□□□□□ -0.65
VPS45-204ENST00000460366 C2orf40Q9H1Z8 148 aa10.98□□□□□ -0.65
VPS45-204ENST00000460366 MTIF3Q9H2K0 278 aaKnown RBP10.98□□□□□ -0.65
VPS45-204ENST00000460366 PRO3102Q9H379 93 aa10.98□□□□□ -0.65
VPS45-204ENST00000460366 AGO3Q9H9G7 860 aaKnown RBP10.98□□□□□ -0.65
VPS45-204ENST00000460366 ERVK-5Q9HDB9 667 aa10.98□□□□□ -0.65
VPS45-204ENST00000460366 PADI3Q9ULW8 664 aa10.98□□□□□ -0.65
VPS45-204ENST00000460366 GINS2Q9Y248 185 aa10.98□□□□□ -0.65
VPS45-204ENST00000460366 NOC2LQ9Y3T9 749 aaKnown RBP10.98□□□□□ -0.65
VPS45-204ENST00000460366 PHLPP2Q6ZVD8 1323 aa10.98□□□□□ -0.65
VPS45-204ENST00000460366 DNAH12Q6ZR08 3092 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 A0A1W2PPC1 479 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 H0YCG3 227 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 ACTN4O43707 911 aaKnown RBP10.97□□□□□ -0.65
VPS45-204ENST00000460366 FAM13AO94988 1023 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 ZNF202O95125 648 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 KRT18P05783 430 aaKnown RBP10.97□□□□□ -0.65
VPS45-204ENST00000460366 MYL1P05976 194 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 PLS3P13797 630 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 SFPQP23246 707 aaKnown RBP eCLIP10.97□□□□□ -0.65
VPS45-204ENST00000460366 ABCD1P33897 745 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 EFNA5P52803 228 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 SMTNP53814 917 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 UBE2HP62256 183 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 PAK2Q13177 524 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 DMP1Q13316 513 aaPredicted RBP10.97□□□□□ -0.65
VPS45-204ENST00000460366 CAPSQ13938 189 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 IKBKEQ14164 716 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 DHX8Q14562 1220 aaKnown RBP10.97□□□□□ -0.65
VPS45-204ENST00000460366 RASIP1Q5U651 963 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 CDCA2Q69YH5 1023 aaPredicted RBP10.97□□□□□ -0.65
VPS45-204ENST00000460366 KANK3Q6NY19 840 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 ZNF365Q70YC5 407 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 FAM228AQ86W67 206 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 ZBTB8OSQ8IWT0 167 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 SLC17A8Q8NDX2 589 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 TMEM40Q8WWA1 233 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 BSNDQ8WZ55 320 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 DNAJC19Q96DA6 116 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 C7orf25Q9BPX7 421 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 REEP2Q9BRK0 252 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 OSBPL7Q9BZF2 842 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 TMEM134Q9H6X4 195 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 PARVGQ9HBI0 331 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 CHST12Q9NRB3 414 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 LARSQ9P2J5 1176 aaKnown RBP10.97□□□□□ -0.65
VPS45-204ENST00000460366 SEL1LQ9UBV2 794 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 SERTAD1Q9UHV2 236 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 LTBP2Q14767 1821 aa10.97□□□□□ -0.65
VPS45-204ENST00000460366 CEP290O15078 2479 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 ARID2Q68CP9 1835 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 NPHP3-ACAD11A0A0J9YXS1 232 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 FRMD3A2A2Y4 597 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 LRRIQ4A6NIV6 560 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 TBCAO75347 108 aaKnown RBP10.96□□□□□ -0.65
VPS45-204ENST00000460366 ACRP10323 421 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 MAPTP10636 758 aaKnown RBP10.96□□□□□ -0.65
VPS45-204ENST00000460366 GAP43P17677 238 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 AXLP30530 894 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 CD52P31358 61 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 NPTX2P47972 431 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 FAM160A1Q05DH4 1040 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 FAM187BQ17R55 369 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 LONRF3Q496Y0 759 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 ELOA2Q8IYF1 753 aaPredicted RBP10.96□□□□□ -0.65
VPS45-204ENST00000460366 FMR1NBQ8N0W7 255 aaPredicted RBP10.96□□□□□ -0.65
VPS45-204ENST00000460366 ENGASEQ8NFI3 743 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 DEPTORQ8TB45 409 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 PAGE5Q96GU1 130 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 TIGD1Q96MW7 591 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 PPP1R16BQ96T49 567 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.96□□□□□ -0.65
VPS45-204ENST00000460366 TRIM9Q9C026 710 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 FZD8Q9H461 694 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 GOLPH3LQ9H4A5 285 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 ARHGAP28Q9P2N2 729 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 ST3GAL5Q9UNP4 418 aa10.96□□□□□ -0.65
VPS45-204ENST00000460366 PVALEFA0A1B0GWK0 134 aa10.95□□□□□ -0.66
VPS45-204ENST00000460366 CCDC169A6NNP5 214 aa10.95□□□□□ -0.66
VPS45-204ENST00000460366 SFI1A8K8P3 1242 aa10.95□□□□□ -0.66
VPS45-204ENST00000460366 PRPF40AO75400 957 aaKnown RBP10.95□□□□□ -0.66
VPS45-204ENST00000460366 PEX3P56589 373 aa10.95□□□□□ -0.66
VPS45-204ENST00000460366 KCNC4Q03721 635 aa10.95□□□□□ -0.66
VPS45-204ENST00000460366 MBTD1Q05BQ5 628 aa10.95□□□□□ -0.66
VPS45-204ENST00000460366 NCBP1Q09161 790 aaKnown RBP10.95□□□□□ -0.66
VPS45-204ENST00000460366 NFX1Q12986 1120 aaKnown RBP10.95□□□□□ -0.66
VPS45-204ENST00000460366 SNW1Q13573 536 aaKnown RBP10.95□□□□□ -0.66
VPS45-204ENST00000460366 DSC3Q14574 896 aa10.95□□□□□ -0.66
VPS45-204ENST00000460366 SHHQ15465 462 aa10.95□□□□□ -0.66
VPS45-204ENST00000460366 MAPK6Q16659 721 aa10.95□□□□□ -0.66
VPS45-204ENST00000460366 TJAP1Q5JTD0 557 aa10.95□□□□□ -0.66
VPS45-204ENST00000460366 KRBA2Q6ZNG9 492 aa10.95□□□□□ -0.66
VPS45-204ENST00000460366 DYMQ7RTS9 669 aa10.95□□□□□ -0.66
VPS45-204ENST00000460366 CATSPER4Q7RTX7 472 aa10.95□□□□□ -0.66
VPS45-204ENST00000460366 GPIHBP1Q8IV16 184 aa10.95□□□□□ -0.66
VPS45-204ENST00000460366 CCDC65Q8IXS2 484 aa10.95□□□□□ -0.66
VPS45-204ENST00000460366 CNNM3Q8NE01 707 aa10.95□□□□□ -0.66
VPS45-204ENST00000460366 PHOSPHO2Q8TCD6 241 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms