RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 RBP5P82980 135 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 PTPAQ15257 358 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 GRIK4Q16099 956 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 BUB1O43683 1085 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 CABYRO75952 493 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 TAF2Q6P1X5 1199 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 FRMD5Q7Z6J6 570 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 CCDC25Q86WR0 208 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 ERICH1Q86X53 443 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 REPS2Q8NFH8 660 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 GPRC5CQ9NQ84 441 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 SYNGAP1Q96PV0 1343 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 SLU7O95391 586 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 EZRP15311 586 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 PTGER2P43116 358 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 PSEN2P49810 448 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 BEX3Q00994 111 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 CCDC144BQ3MJ40 725 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 RUSC1Q9BVN2 902 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 PIK3CDO00329 1044 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 EIF3DO15371 548 aaKnown RBP eCLIP15.17■□□□□ 0.021e-8■□□□□ 9.3
SMARCA4-204ENST00000444061 NPTXRO95502 500 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 VTNP04004 478 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 CYP3A4P08684 503 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 UBA1P22314 1058 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 NAMPTP43490 491 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 MESDQ14696 234 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 TMEM35BQ8NCS4 154 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 KIFC3Q9BVG8 833 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 WDR72Q3MJ13 1102 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 ANKRD40Q6AI12 368 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 SLC5A5Q92911 643 aa15.17■□□□□ 0.02
SMARCA4-204ENST00000444061 UBE4BO95155 1302 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 CD4P01730 458 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 VAV2P52735 878 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 MRPS9P82933 396 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 SNRNP35Q16560 246 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 GAS2L3Q86XJ1 694 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 TMEM39AQ9NV64 488 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 ATRNL1Q5VV63 1379 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 A0A0G2JLL6 359 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 UNCXA6NJT0 531 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 POLR3GO15318 223 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 CLEC17AQ6ZS10 378 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 PRRT2Q7Z6L0 340 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 CDR2LQ86X02 465 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 SENP7Q9BQF6 1050 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 CA12O43570 354 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 IL18RAPO95256 599 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 SERPING1P05155 500 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 CD99L2Q8TCZ2 262 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 IFT81Q8WYA0 676 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 PPP1R12CQ9BZL4 782 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 DNAJC18Q9H819 358 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 SNRPFP62306 86 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 TUBB2AQ13885 445 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 VEPH1Q14D04 833 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 DCAF4L1Q3SXM0 396 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 ADSSL1Q8N142 457 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 TUBB2BQ9BVA1 445 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 INTS2Q9H0H0 1204 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 ASIC3Q9UHC3 531 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 PPME1Q9Y570 386 aa15.16■□□□□ 0.02
SMARCA4-204ENST00000444061 MEIS2O14770 477 aa15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 PGK1P00558 417 aa15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 CLTAP09496 248 aa15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 NFRKBQ6P4R8 1299 aa15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 CCDC91Q7Z6B0 441 aa15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 VSTM4Q8IW00 320 aa15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 TNIP3Q96KP6 325 aa15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 FEZ2Q9UHY8 353 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 SNX9Q9Y5X1 595 aa15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 SLC16A3O15427 465 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 ACTN4O43707 911 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 KCNA3P22001 575 aa15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 PTPROQ16827 1216 aa15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 CXCL17Q6UXB2 119 aa15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 ENOSF1Q7L5Y1 443 aa15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 OTOP1Q7RTM1 612 aa15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 PURBQ96QR8 312 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 TBX20Q9UMR3 447 aa15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 OR1G1P47890 313 aa15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 EDRF1Q3B7T1 1238 aa15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 CFAP221Q4G0U5 840 aa15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 CCDC105Q8IYK2 499 aa15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 NME8Q8N427 588 aa15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 SENP6Q9GZR1 1112 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-204ENST00000444061 GRK4P32298 578 aa15.14■□□□□ 0.01
SMARCA4-204ENST00000444061 CELF3Q5SZQ8 465 aaKnown RBP15.14■□□□□ 0.01
SMARCA4-204ENST00000444061 HMGCRP04035 888 aa15.14■□□□□ 0.01
SMARCA4-204ENST00000444061 LGALS2P05162 132 aa15.14■□□□□ 0.01
SMARCA4-204ENST00000444061 EIF4A3P38919 411 aaKnown RBP15.14■□□□□ 0.01
SMARCA4-204ENST00000444061 CCDC89Q8N998 374 aa15.14■□□□□ 0.01
SMARCA4-204ENST00000444061 COPS5Q92905 334 aa15.14■□□□□ 0.01
SMARCA4-204ENST00000444061 HAUS1Q96CS2 278 aa15.14■□□□□ 0.01
SMARCA4-204ENST00000444061 OSMRQ99650 979 aa15.14■□□□□ 0.01
SMARCA4-204ENST00000444061 AAASQ9NRG9 546 aa15.14■□□□□ 0.01
SMARCA4-204ENST00000444061 CEP72Q9P209 647 aa15.14■□□□□ 0.01
SMARCA4-204ENST00000444061 HOXA2O43364 376 aa15.14■□□□□ 0.01
SMARCA4-204ENST00000444061 SNHG28P0DPA3 235 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms