RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 AENQ8WTP8 325 aaKnown RBP11.3□□□□□ -0.6
CPNE1-218ENST00000439806 SPIRE2Q8WWL2 714 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 BICD1Q96G01 975 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 KRT12Q99456 494 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 AGPAT1Q99943 283 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 GPR88Q9GZN0 384 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 A1CFQ9NQ94 594 aaKnown RBP11.3□□□□□ -0.6
CPNE1-218ENST00000439806 HOXC10Q9NYD6 342 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 CYP39A1Q9NYL5 469 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-218ENST00000439806 SUCLA2Q9P2R7 463 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-218ENST00000439806 DMGDHQ9UI17 866 aaKnown RBP11.3□□□□□ -0.6
CPNE1-218ENST00000439806 OTOFQ9HC10 1997 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 SSC5DA1L4H1 1573 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 SPDYE16A6NNV3 312 aaPredicted RBP11.29□□□□□ -0.6
CPNE1-218ENST00000439806 ANKRD63C9JTQ0 380 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 PGRMC1O00264 195 aaKnown RBP11.29□□□□□ -0.6
CPNE1-218ENST00000439806 PMM2O15305 246 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 SORBS3O60504 671 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 DGAT1O75907 488 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 HEXIM1O94992 359 aaKnown RBP11.29□□□□□ -0.6
CPNE1-218ENST00000439806 SUPT20HL2P0C7V6 817 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 MYBL2P10244 700 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 ABCB4P21439 1286 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 CYP2C19P33261 490 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 ABCD1P33897 745 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 USP8P40818 1118 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 AARSP49588 968 aaKnown RBP eCLIP11.29□□□□□ -0.6
CPNE1-218ENST00000439806 MFAP3P55082 362 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 RNASE9P60153 205 aaKnown RBP11.29□□□□□ -0.6
CPNE1-218ENST00000439806 ACTR2P61160 394 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 MRPS25P82663 173 aaKnown RBP11.29□□□□□ -0.6
CPNE1-218ENST00000439806 PRKCEQ02156 737 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 PRKG1Q13976 671 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 R3HDM1Q15032 1099 aaKnown RBP11.29□□□□□ -0.6
CPNE1-218ENST00000439806 EMBQ6PCB8 327 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 SLFN11Q7Z7L1 901 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 KLHL7Q8IXQ5 586 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 USP38Q8NB14 1042 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 TMEM161BQ8NDZ6 487 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 CHST13Q8NET6 341 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 TMC2Q8TDI7 906 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 HDAC7Q8WUI4 952 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 BSNDQ8WZ55 320 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 EXOC4Q96A65 974 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 SAAL1Q96ER3 474 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 GDAP1L1Q96MZ0 367 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 SYT11Q9BT88 431 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 TMEM117Q9H0C3 514 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 POLR3FQ9H1D9 316 aaPredicted RBP11.29□□□□□ -0.6
CPNE1-218ENST00000439806 KCNG1Q9UIX4 513 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 STXBP5LQ9Y2K9 1186 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 FAN1Q9Y2M0 1017 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 IGSF9BQ9UPX0 1349 aa11.29□□□□□ -0.6
CPNE1-218ENST00000439806 SBF1O95248 1867 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 CCDC66A2RUB6 948 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 ANKRD62A6NC57 917 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 ERICH4A6NGS2 130 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 SPATA31C2B4DYI2 1134 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 FOXN3O00409 490 aaPredicted RBP11.28□□□□□ -0.6
CPNE1-218ENST00000439806 ZNF862O60290 1169 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 CNGA1P29973 690 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 RTP1P59025 263 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 MAP2K1Q02750 393 aaPredicted RBP11.28□□□□□ -0.6
CPNE1-218ENST00000439806 NNTQ13423 1086 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 STXBP2Q15833 593 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 SNRNP35Q16560 246 aaKnown RBP11.28□□□□□ -0.6
CPNE1-218ENST00000439806 PTPROQ16827 1216 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 MTERF2Q49AM1 385 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 SH3D19Q5HYK7 790 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 C1orf220Q5T0J3 134 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 KRT39Q6A163 491 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 CBWD2Q8IUF1 395 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 RPUSD2Q8IZ73 545 aaKnown RBP11.28□□□□□ -0.6
CPNE1-218ENST00000439806 GPD1LQ8N335 351 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 METTL13Q8N6R0 699 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 OLIG1Q8TAK6 271 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 SLC35G2Q8TBE7 412 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 PLEKHO2Q8TD55 490 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 ACTRT1Q8TDG2 376 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 POMGNT1Q8WZA1 660 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 CALR3Q96L12 384 aaKnown RBP11.28□□□□□ -0.6
CPNE1-218ENST00000439806 NT5C1BQ96P26 610 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 RUFY1Q96T51 708 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 HINFPQ9BQA5 517 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 KIFC3Q9BVG8 833 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 GOLPH3Q9H4A6 298 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 EPB41L5Q9HCM4 733 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 TMEM8AQ9HCN3 771 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 CYP26B1Q9NR63 512 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 PSD3Q9NYI0 1048 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 ZHX1Q9UKY1 873 aaPredicted RBP11.28□□□□□ -0.6
CPNE1-218ENST00000439806 DIS3Q9Y2L1 958 aaKnown RBP11.28□□□□□ -0.6
CPNE1-218ENST00000439806 AFG3L2Q9Y4W6 797 aa11.28□□□□□ -0.6
CPNE1-218ENST00000439806 ZNFX1Q9P2E3 1918 aaKnown RBP11.28□□□□□ -0.6
CPNE1-218ENST00000439806 PAPPA2Q9BXP8 1791 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 GOLGA6BA6NDN3 693 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 CCDC188H7C350 402 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 OPA1O60313 960 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 HSF2BPO75031 334 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms