RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 FNDC3AQ9Y2H6 1198 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-208ENST00000436638 ATP6V1DQ9Y5K8 247 aa6.91□□□□□ -1.3
ECHDC1-208ENST00000436638 DDX49Q9Y6V7 483 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-208ENST00000436638 ASTN1O14525 1302 aa6.91□□□□□ -1.3
ECHDC1-208ENST00000436638 PLXNA1Q9UIW2 1896 aa6.91□□□□□ -1.3
ECHDC1-208ENST00000436638 DOCK3Q8IZD9 2030 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 MEIS1O00470 390 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 NOP56O00567 594 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 DYNC1LI2O43237 492 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 NEMFO60524 1076 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 LILRB5O75023 590 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 DUSP11O75319 330 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 TDP2O95551 362 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 GGPS1O95749 300 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 BMP15O95972 392 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 F13A1P00488 732 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 ABL1P00519 1130 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 TFRCP02786 760 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 PSAPP07602 524 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 ITGB5P18084 799 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 COL8A1P27658 744 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 MCM7P33993 719 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 RESTQ13127 1097 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 ZNF174Q15697 407 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 CALCRLQ16602 461 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 Q4G0T1 1027 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 DUSP28Q4G0W2 176 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 EARS2Q5JPH6 523 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 L1TD1Q5T7N2 865 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 MAP3K21Q5TCX8 1036 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 ANO1Q5XXA6 986 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 EGFLAMQ63HQ2 1017 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 PPP4R3AQ6IN85 833 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 PSAPL1Q6NUJ1 521 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 TAPT1Q6NXT6 567 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 HFE2Q6ZVN8 426 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 TLK2Q86UE8 772 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 TRPV1Q8NER1 839 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 ARMC5Q96C12 935 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 TRIM11Q96F44 468 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 ZNF333Q96JL9 665 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 SPACA7Q96KW9 195 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 FAM20AQ96MK3 541 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 INPP4AQ96PE3 977 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 TEKT3Q9BXF9 490 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 JPH1Q9HDC5 661 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 XPNPEP3Q9NQH7 507 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 KCNH7Q9NS40 1196 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 Q9Y3F1 56 aa6.9□□□□□ -1.3
ECHDC1-208ENST00000436638 CYP3A7-CYP3A51PA0A087WV96 503 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 ZBTB42B2RXF5 422 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 FAM86B1E9PN63 330 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 DDX39AO00148 427 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 TBX3O15119 743 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 SORBS3O60504 671 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 GAS7O60861 476 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 MMP20O60882 483 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 RGS9O75916 674 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 IGHA2P01877 340 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 FAM86B2P0C5J1 330 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 OR52Z1P0C646 297 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 C6orf222P0C671 652 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 ARP10275 920 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 CAPN2P17655 700 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 CYP3A7P24462 503 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 MPSTP25325 297 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 MAN1A1P33908 653 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 CPT1AP50416 773 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 SP4Q02446 784 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 DNM1Q05193 864 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 TRIP4Q15650 581 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 LY6KQ17RY6 165 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 TMEM266Q2M3C6 531 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 COL13A1Q5TAT6 717 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 LRCH2Q5VUJ6 765 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 C20orf204Q6ZNR8 217 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 RNF180Q86T96 592 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 SLFN12Q8IYM2 578 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 ARRDC4Q8NCT1 418 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 CYP2W1Q8TAV3 490 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 CRYGNQ8WXF5 182 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 SPATA33Q96N06 139 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 DEFB118Q96PH6 123 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 KATNBL1Q9H079 304 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 IFT122Q9HBG6 1241 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 AGO4Q9HCK5 861 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 TBC1D22BQ9NU19 505 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 CHMP5Q9NZZ3 219 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 DDX41Q9UJV9 622 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 CFAP45Q9UL16 551 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 SAMM50Q9Y512 469 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 SCINQ9Y6U3 715 aa6.89□□□□□ -1.31
ECHDC1-208ENST00000436638 NFASCO94856 1347 aa6.88□□□□□ -1.31
ECHDC1-208ENST00000436638 IGLV3-22A0A075B6J6 115 aa6.88□□□□□ -1.31
ECHDC1-208ENST00000436638 CCDC85CA6NKD9 419 aa6.88□□□□□ -1.31
ECHDC1-208ENST00000436638 KBTBD13C9JR72 458 aa6.88□□□□□ -1.31
ECHDC1-208ENST00000436638 IPO5O00410 1097 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-208ENST00000436638 LAD1O00515 517 aa6.88□□□□□ -1.31
ECHDC1-208ENST00000436638 MSH4O15457 936 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms