RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 CCDC51Q96ER9 411 aa19.5■□□□□ 0.71
NUP50-208ENST00000430547 TMEM169Q96HH4 297 aa19.5■□□□□ 0.71
NUP50-208ENST00000430547 NFKBIZQ9BYH8 718 aa19.5■□□□□ 0.71
NUP50-208ENST00000430547 TRIM6Q9C030 488 aaPredicted RBP19.5■□□□□ 0.71
NUP50-208ENST00000430547 RSAD1Q9HA92 442 aa19.5■□□□□ 0.71
NUP50-208ENST00000430547 GPRC5CQ9NQ84 441 aa19.5■□□□□ 0.71
NUP50-208ENST00000430547 PCDHGC5Q9Y5F6 944 aa19.5■□□□□ 0.71
NUP50-208ENST00000430547 GRXCR2A6NFK2 248 aa19.49■□□□□ 0.71
NUP50-208ENST00000430547 MEIS3P2A8K0S8 358 aa19.49■□□□□ 0.71
NUP50-208ENST00000430547 IL9P15248 144 aa19.49■□□□□ 0.71
NUP50-208ENST00000430547 PRPHP41219 470 aa19.49■□□□□ 0.71
NUP50-208ENST00000430547 BCAR1P56945 870 aa19.49■□□□□ 0.71
NUP50-208ENST00000430547 ERVFC1P60507 584 aa19.49■□□□□ 0.71
NUP50-208ENST00000430547 MBTD1Q05BQ5 628 aa19.49■□□□□ 0.71
NUP50-208ENST00000430547 BMS1Q14692 1282 aaKnown RBP19.49■□□□□ 0.71
NUP50-208ENST00000430547 CLUL1Q15846 466 aa19.49■□□□□ 0.71
NUP50-208ENST00000430547 PLPP4Q5VZY2 271 aa19.49■□□□□ 0.71
NUP50-208ENST00000430547 KRT79Q5XKE5 535 aa19.49■□□□□ 0.71
NUP50-208ENST00000430547 HACE1Q8IYU2 909 aa19.49■□□□□ 0.71
NUP50-208ENST00000430547 SLC39A11Q8N1S5 342 aa19.49■□□□□ 0.71
NUP50-208ENST00000430547 EFHBQ8N7U6 833 aa19.49■□□□□ 0.71
NUP50-208ENST00000430547 IGSF22Q8N9C0 903 aa19.49■□□□□ 0.71
NUP50-208ENST00000430547 CPB2Q96IY4 423 aa19.49■□□□□ 0.71
NUP50-208ENST00000430547 TCF25Q9BQ70 676 aa19.49■□□□□ 0.71
NUP50-208ENST00000430547 GBP3Q9H0R5 595 aa19.49■□□□□ 0.71
NUP50-208ENST00000430547 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.49■□□□□ 0.71
NUP50-208ENST00000430547 TBC1D13Q9NVG8 400 aa19.49■□□□□ 0.71
NUP50-208ENST00000430547 KIAA1024Q9UPX6 916 aa19.49■□□□□ 0.71
NUP50-208ENST00000430547 LINC01565O15544 149 aa19.48■□□□□ 0.71
NUP50-208ENST00000430547 TBX10O75333 385 aa19.48■□□□□ 0.71
NUP50-208ENST00000430547 OFD1O75665 1012 aa19.48■□□□□ 0.71
NUP50-208ENST00000430547 SRGAP2BP0DMP2 458 aa19.48■□□□□ 0.71
NUP50-208ENST00000430547 ITGA4P13612 1032 aa19.48■□□□□ 0.71
NUP50-208ENST00000430547 NCLP19338 710 aaKnown RBP19.48■□□□□ 0.71
NUP50-208ENST00000430547 CA8P35219 290 aa19.48■□□□□ 0.71
NUP50-208ENST00000430547 LTBRP36941 435 aa19.48■□□□□ 0.71
NUP50-208ENST00000430547 ADAM15Q13444 863 aa19.48■□□□□ 0.71
NUP50-208ENST00000430547 UBXN11Q5T124 520 aa19.48■□□□□ 0.71
NUP50-208ENST00000430547 LARP1BQ659C4 914 aaKnown RBP19.48■□□□□ 0.71
NUP50-208ENST00000430547 TMC7Q7Z402 723 aa19.48■□□□□ 0.71
NUP50-208ENST00000430547 MRPL10Q7Z7H8 261 aaKnown RBP19.48■□□□□ 0.71
NUP50-208ENST00000430547 FAM193BQ96PV7 902 aaPredicted RBP19.48■□□□□ 0.71
NUP50-208ENST00000430547 CDCA3Q99618 268 aaPredicted RBP19.48■□□□□ 0.71
NUP50-208ENST00000430547 CSRNP2Q9H175 543 aa19.48■□□□□ 0.71
NUP50-208ENST00000430547 NGRNQ9NPE2 291 aaKnown RBP19.48■□□□□ 0.71
NUP50-208ENST00000430547 UBN1Q9NPG3 1134 aa19.48■□□□□ 0.71
NUP50-208ENST00000430547 DDX19AQ9NUU7 478 aaKnown RBP19.48■□□□□ 0.71
NUP50-208ENST00000430547 KANSL3Q9P2N6 904 aa19.48■□□□□ 0.71
NUP50-208ENST00000430547 MUC3AQ02505 3323 aa19.48■□□□□ 0.71
NUP50-208ENST00000430547 MYH11P35749 1972 aa19.47■□□□□ 0.71
NUP50-208ENST00000430547 NT5C1B-RDH14C9J2C7 533 aa19.47■□□□□ 0.71
NUP50-208ENST00000430547 ARF4P18085 180 aaPredicted RBP19.47■□□□□ 0.71
NUP50-208ENST00000430547 CYP11B2P19099 503 aa19.47■□□□□ 0.71
NUP50-208ENST00000430547 SSTR3P32745 418 aaPredicted RBP19.47■□□□□ 0.71
NUP50-208ENST00000430547 DLX2Q07687 328 aaPredicted RBP19.47■□□□□ 0.71
NUP50-208ENST00000430547 PPP2R5AQ15172 486 aa19.47■□□□□ 0.71
NUP50-208ENST00000430547 TMEM132AQ24JP5 1023 aa19.47■□□□□ 0.71
NUP50-208ENST00000430547 AGMOQ6ZNB7 445 aa19.47■□□□□ 0.71
NUP50-208ENST00000430547 EIF2AQ9BY44 585 aaKnown RBP19.47■□□□□ 0.71
NUP50-208ENST00000430547 C2orf40Q9H1Z8 148 aa19.47■□□□□ 0.71
NUP50-208ENST00000430547 BHMT2Q9H2M3 363 aa19.47■□□□□ 0.71
NUP50-208ENST00000430547 PRMT7Q9NVM4 692 aaPredicted RBP19.47■□□□□ 0.71
NUP50-208ENST00000430547 CD207Q9UJ71 328 aa19.47■□□□□ 0.71
NUP50-208ENST00000430547 IPPQ9Y573 584 aa19.47■□□□□ 0.71
NUP50-208ENST00000430547 FSCN2O14926 492 aa19.46■□□□□ 0.71
NUP50-208ENST00000430547 PER2O15055 1255 aa19.46■□□□□ 0.71
NUP50-208ENST00000430547 SMC1AQ14683 1233 aaKnown RBP19.46■□□□□ 0.71
NUP50-208ENST00000430547 FAM178BQ8IXR5 827 aa19.46■□□□□ 0.71
NUP50-208ENST00000430547 DEPTORQ8TB45 409 aa19.46■□□□□ 0.71
NUP50-208ENST00000430547 IFT74Q96LB3 600 aa19.46■□□□□ 0.71
NUP50-208ENST00000430547 PRIMPOLQ96LW4 560 aa19.46■□□□□ 0.71
NUP50-208ENST00000430547 NRDE2Q9H7Z3 1164 aa19.46■□□□□ 0.71
NUP50-208ENST00000430547 B4GALT5O43286 388 aa19.45■□□□□ 0.7
NUP50-208ENST00000430547 NAMPTP43490 491 aa19.45■□□□□ 0.7
NUP50-208ENST00000430547 ATP2C1P98194 919 aaPredicted RBP19.45■□□□□ 0.7
NUP50-208ENST00000430547 SMAD4Q13485 552 aaKnown RBP19.45■□□□□ 0.7
NUP50-208ENST00000430547 ECM1Q16610 540 aa19.45■□□□□ 0.7
NUP50-208ENST00000430547 AMHR2Q16671 573 aa19.45■□□□□ 0.7
NUP50-208ENST00000430547 DUSP6Q16828 381 aa19.45■□□□□ 0.7
NUP50-208ENST00000430547 CDCA2Q69YH5 1023 aaPredicted RBP19.45■□□□□ 0.7
NUP50-208ENST00000430547 SLC27A1Q6PCB7 646 aa19.45■□□□□ 0.7
NUP50-208ENST00000430547 TMEM87AQ8NBN3 555 aa19.45■□□□□ 0.7
NUP50-208ENST00000430547 SMG8Q8ND04 991 aaKnown RBP19.45■□□□□ 0.7
NUP50-208ENST00000430547 APOL6Q9BWW8 343 aa19.45■□□□□ 0.7
NUP50-208ENST00000430547 BARX2Q9UMQ3 279 aaPredicted RBP19.45■□□□□ 0.7
NUP50-208ENST00000430547 DNM3Q9UQ16 869 aa19.45■□□□□ 0.7
NUP50-208ENST00000430547 PP2D1A8MPX8 630 aa19.44■□□□□ 0.7
NUP50-208ENST00000430547 MBTPS2O43462 519 aa19.44■□□□□ 0.7
NUP50-208ENST00000430547 POMCP01189 267 aa19.44■□□□□ 0.7
NUP50-208ENST00000430547 ZRSR1Q15695 479 aaKnown RBP19.44■□□□□ 0.7
NUP50-208ENST00000430547 MAPK6Q16659 721 aa19.44■□□□□ 0.7
NUP50-208ENST00000430547 PPP4R3CPQ6ZMV5 832 aa19.44■□□□□ 0.7
NUP50-208ENST00000430547 GJD3Q8N144 294 aa19.44■□□□□ 0.7
NUP50-208ENST00000430547 KIFAP3Q92845 792 aa19.44■□□□□ 0.7
NUP50-208ENST00000430547 BACH2Q9BYV9 841 aa19.44■□□□□ 0.7
NUP50-208ENST00000430547 DNAJB4Q9UDY4 337 aa19.44■□□□□ 0.7
NUP50-208ENST00000430547 PRKAG3Q9UGI9 489 aa19.44■□□□□ 0.7
NUP50-208ENST00000430547 HES2Q9Y543 173 aa19.44■□□□□ 0.7
NUP50-208ENST00000430547 VPS37CA5D8V6 355 aaPredicted RBP19.43■□□□□ 0.7
NUP50-208ENST00000430547 VWA3AA6NCI4 1184 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms