RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 NDST4Q9H3R1 872 aa7.9□□□□□ -1.15
LSM8-204ENST00000424702 PYCARDQ9ULZ3 195 aa7.9□□□□□ -1.15
LSM8-204ENST00000424702 ZBBXA8MT70 800 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 TUBB4AP04350 444 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 SMIM10L2AP0DMW4 78 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 SMIM10L2BP0DMW5 78 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 CASP14P31944 242 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 ITGA7Q13683 1181 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 PTGISQ16647 500 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 VWA3BQ502W6 1294 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 RDH13Q8NBN7 331 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 AFAP1L1Q8TED9 768 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 LENG9Q96B70 501 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 RPF1Q9H9Y2 349 aaKnown RBP7.89□□□□□ -1.15
LSM8-204ENST00000424702 ANKFY1Q9P2R3 1169 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 EIF3DO15371 548 aaKnown RBP eCLIP7.89□□□□□ -1.15
LSM8-204ENST00000424702 TEX33O43247 280 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 SNAI1O95863 264 aaPredicted RBP7.89□□□□□ -1.15
LSM8-204ENST00000424702 TMEM191BP0C7N4 346 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 KRT83P78385 493 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 ARHGAP1Q07960 439 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 RBL2Q08999 1139 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 ZNF568Q3ZCX4 644 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 ABHD15Q6UXT9 468 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 FAM186BQ8IYM0 893 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 CCAR2Q8N163 923 aaKnown RBP7.89□□□□□ -1.15
LSM8-204ENST00000424702 MSANTD4Q8NCY6 345 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 COPS5Q92905 334 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 ZIC5Q96T25 663 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.89□□□□□ -1.15
LSM8-204ENST00000424702 PDGFCQ9NRA1 345 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 SEPT11Q9NVA2 429 aaKnown RBP7.89□□□□□ -1.15
LSM8-204ENST00000424702 PARP2Q9UGN5 583 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 PDXKO00764 312 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 PQBP1O60828 265 aaKnown RBP7.89□□□□□ -1.15
LSM8-204ENST00000424702 NR3C1P04150 777 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 SPATA31C1P0DKV0 1188 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 ZNF18P17022 549 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 NMT1P30419 496 aaKnown RBP7.89□□□□□ -1.15
LSM8-204ENST00000424702 ACLYP53396 1101 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 AP3M2P53677 418 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 SLC12A3P55017 1021 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 NR1I3Q14994 352 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 GJC2Q5T442 439 aaPredicted RBP7.89□□□□□ -1.15
LSM8-204ENST00000424702 PLA2G4FQ68DD2 849 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 TTI2Q6NXR4 508 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 NOTUMQ6P988 496 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 KIAA0895Q8NCT3 520 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 KIAA1524Q8TCG1 905 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 ANKRD36BP1Q96IX9 119 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 HSD17B14Q9BPX1 270 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 MSTO1Q9BUK6 570 aa7.89□□□□□ -1.15
LSM8-204ENST00000424702 NUCKS1Q9H1E3 243 aaKnown RBP7.89□□□□□ -1.15
LSM8-204ENST00000424702 SMIM35A0A1B0GVV1 85 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 CLDN3O15551 220 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 PEX10O60683 326 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 LGR5O75473 907 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 ATN1P54259 1190 aaPredicted RBP7.88□□□□□ -1.15
LSM8-204ENST00000424702 RNASELQ05823 741 aaKnown RBP7.88□□□□□ -1.15
LSM8-204ENST00000424702 ARID5BQ14865 1188 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 PLCB4Q15147 1175 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 ECM1Q16610 540 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 EDRF1Q3B7T1 1238 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 CDKAL1Q5VV42 579 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 CENPPQ6IPU0 288 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 HAUS6Q7Z4H7 955 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 U2AF1L4Q8WU68 220 aaKnown RBP7.88□□□□□ -1.15
LSM8-204ENST00000424702 SPIRE2Q8WWL2 714 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 SH2D3AQ9BRG2 576 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 LSM14BQ9BX40 385 aaKnown RBP7.88□□□□□ -1.15
LSM8-204ENST00000424702 ARHGAP39Q9C0H5 1083 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 UNC93B1Q9H1C4 597 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 ATAD5Q96QE3 1844 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 A6NJR5 290 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 ASGR1P07306 291 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 CTSHP09668 335 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 RARRES1P49788 294 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 RTP1P59025 263 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 GNG11P61952 73 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 ITGB3BPQ13352 177 aaPredicted RBP7.88□□□□□ -1.15
LSM8-204ENST00000424702 RAPGEF1Q13905 1077 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 KCNA10Q16322 511 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 CCDC60Q8IWA6 550 aaPredicted RBP7.88□□□□□ -1.15
LSM8-204ENST00000424702 FTHL17Q9BXU8 183 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 RSPH10B2B2RC85 870 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 AFPP02771 609 aaKnown RBP7.88□□□□□ -1.15
LSM8-204ENST00000424702 RSPH10BP0C881 870 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 MYBP10242 640 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 USP8P40818 1118 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 MRPS6P82932 125 aaKnown RBP7.88□□□□□ -1.15
LSM8-204ENST00000424702 ARID5AQ03989 594 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 GOLGA8FQ08AF8 430 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 GOLGA8DPQ0D2H9 430 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 PPIGQ13427 754 aaKnown RBP eCLIP7.88□□□□□ -1.15
LSM8-204ENST00000424702 GBP6Q6ZN66 633 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 RSPH1Q8WYR4 309 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 DNAJC19Q96DA6 116 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 PRIMPOLQ96LW4 560 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 CRACR2AQ9BSW2 395 aa7.88□□□□□ -1.15
LSM8-204ENST00000424702 UBN1Q9NPG3 1134 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms