RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 FAM114A2Q9NRY5 505 aa17.17■□□□□ 0.34
HOXD3-202ENST00000410016 USP20Q9Y2K6 914 aa17.17■□□□□ 0.34
HOXD3-202ENST00000410016 SAMM50Q9Y512 469 aa17.17■□□□□ 0.34
HOXD3-202ENST00000410016 NDUFAB1O14561 156 aa17.16■□□□□ 0.34
HOXD3-202ENST00000410016 MAPK13O15264 365 aa17.16■□□□□ 0.34
HOXD3-202ENST00000410016 PMM2O15305 246 aa17.16■□□□□ 0.34
HOXD3-202ENST00000410016 ASNSP08243 561 aa17.16■□□□□ 0.34
HOXD3-202ENST00000410016 ZNF211Q13398 564 aaPredicted RBP17.16■□□□□ 0.34
HOXD3-202ENST00000410016 PCNX4Q63HM2 1172 aa17.16■□□□□ 0.34
HOXD3-202ENST00000410016 HAUS6Q7Z4H7 955 aa17.16■□□□□ 0.34
HOXD3-202ENST00000410016 KAT5Q92993 513 aa17.16■□□□□ 0.34
HOXD3-202ENST00000410016 VTI1AQ96AJ9 217 aa17.16■□□□□ 0.34
HOXD3-202ENST00000410016 TRIM51Q9BSJ1 452 aa17.16■□□□□ 0.34
HOXD3-202ENST00000410016 TMEM150BA6NC51 233 aa17.16■□□□□ 0.34
HOXD3-202ENST00000410016 BRD2P25440 801 aaKnown RBP17.16■□□□□ 0.34
HOXD3-202ENST00000410016 YWHABP31946 246 aaKnown RBP17.16■□□□□ 0.34
HOXD3-202ENST00000410016 COPB2P35606 906 aa17.16■□□□□ 0.34
HOXD3-202ENST00000410016 CETN1Q12798 172 aa17.16■□□□□ 0.34
HOXD3-202ENST00000410016 PRPF4BQ13523 1007 aaKnown RBP17.16■□□□□ 0.34
HOXD3-202ENST00000410016 MTMR3Q13615 1198 aa17.16■□□□□ 0.34
HOXD3-202ENST00000410016 PTGISQ16647 500 aa17.16■□□□□ 0.34
HOXD3-202ENST00000410016 DUPD1Q68J44 220 aa17.16■□□□□ 0.34
HOXD3-202ENST00000410016 PRPF38AQ8NAV1 312 aaKnown RBP17.16■□□□□ 0.34
HOXD3-202ENST00000410016 PCDHB18PQ96TA0 734 aa17.16■□□□□ 0.34
HOXD3-202ENST00000410016 FAM107BQ9H098 131 aa17.16■□□□□ 0.34
HOXD3-202ENST00000410016 TMEM117Q9H0C3 514 aa17.16■□□□□ 0.34
HOXD3-202ENST00000410016 DPH5Q9H2P9 285 aa17.16■□□□□ 0.34
HOXD3-202ENST00000410016 GOLGA6L10A6NI86 522 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 CHRNB2P17787 502 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 DHX9Q08211 1270 aaKnown RBP17.15■□□□□ 0.34
HOXD3-202ENST00000410016 PPP2R5EQ16537 467 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 C11orf63Q6NUN7 778 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 ADAT2Q7Z6V5 191 aaKnown RBP17.15■□□□□ 0.34
HOXD3-202ENST00000410016 RPUSD2Q8IZ73 545 aaKnown RBP17.15■□□□□ 0.34
HOXD3-202ENST00000410016 MTMR14Q8NCE2 650 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 SYTL5Q8TDW5 730 aaPredicted RBP17.15■□□□□ 0.34
HOXD3-202ENST00000410016 NAP1L3Q99457 506 aaPredicted RBP17.15■□□□□ 0.34
HOXD3-202ENST00000410016 ZNF341Q9BYN7 854 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 TMOD4Q9NZQ9 345 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 SLC12A6Q9UHW9 1150 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 PSME4Q14997 1843 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 COL4A5P29400 1685 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 ASTN2O75129 1339 aaPredicted RBP17.15■□□□□ 0.34
HOXD3-202ENST00000410016 A0A087WUV0 522 aaPredicted RBP17.15■□□□□ 0.34
HOXD3-202ENST00000410016 BIRC3Q13489 604 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 MTMR1Q13613 665 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 TNIP1Q15025 636 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 UGCGQ16739 394 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 AADACL2Q6P093 401 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 FAM71AQ8IYT1 594 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 UBLCP1Q8WVY7 318 aaPredicted RBP17.15■□□□□ 0.34
HOXD3-202ENST00000410016 PPM1EQ8WY54 764 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 KRT35Q92764 455 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 GLG1Q92896 1179 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 ERP44Q9BS26 406 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 GPRC5CQ9NQ84 441 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 ZDHHC18Q9NUE0 388 aa17.15■□□□□ 0.34
HOXD3-202ENST00000410016 NOCTQ9UK39 431 aaKnown RBP17.15■□□□□ 0.34
HOXD3-202ENST00000410016 PHF20L1A8MW92 1017 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 PPFIA2O75334 1257 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 SGPL1O95470 568 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 ADSSP30520 456 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 SNRPFP62306 86 aaKnown RBP17.14■□□□□ 0.33
HOXD3-202ENST00000410016 GPC5P78333 572 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 DR1Q01658 176 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 RUFY4Q6ZNE9 571 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 MCF2L2Q86YR7 1114 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 C4orf19Q8IY42 314 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 ZDHHC14Q8IZN3 488 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 LARGE2Q8N3Y3 721 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 EPS8L1Q8TE68 723 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 KREMEN1Q96MU8 473 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 PSMD1Q99460 953 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 RAB17Q9H0T7 212 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 ZNF277Q9NRM2 450 aaPredicted RBP17.14■□□□□ 0.33
HOXD3-202ENST00000410016 CTTNBP2NLQ9P2B4 639 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 PFASO15067 1338 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 LOXHD1Q8IVV2 1947 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 SRRM3A6NNA2 597 aaPredicted RBP17.14■□□□□ 0.33
HOXD3-202ENST00000410016 BACH1O14867 736 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 ATP9AO75110 1047 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 RTN2O75298 545 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 ADRB2P07550 413 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 HPDP32754 393 aaPredicted RBP17.14■□□□□ 0.33
HOXD3-202ENST00000410016 PEX5P50542 639 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 SEC24CP53992 1094 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 NCKAP1LP55160 1127 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 ZNF746Q6NUN9 644 aaPredicted RBP17.14■□□□□ 0.33
HOXD3-202ENST00000410016 NOP9Q86U38 636 aaKnown RBP17.14■□□□□ 0.33
HOXD3-202ENST00000410016 ZBED3Q96IU2 234 aaPredicted RBP17.14■□□□□ 0.33
HOXD3-202ENST00000410016 TAAR1Q96RJ0 339 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 TRIM31Q9BZY9 425 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 CENPHQ9H3R5 247 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 LRRC4CQ9HCJ2 640 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 TBC1D22BQ9NU19 505 aa17.14■□□□□ 0.33
HOXD3-202ENST00000410016 MIF4GDA9UHW6 222 aaKnown RBP17.13■□□□□ 0.33
HOXD3-202ENST00000410016 SLC16A4O15374 487 aa17.13■□□□□ 0.33
HOXD3-202ENST00000410016 GZMAP12544 262 aa17.13■□□□□ 0.33
HOXD3-202ENST00000410016 MARCKSL1P49006 195 aa17.13■□□□□ 0.33
HOXD3-202ENST00000410016 MXI1P50539 228 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms