RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 ITGB1P05556 798 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 SPATA31C1P0DKV0 1188 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 ZSCAN20P17040 1043 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 ATF7P17544 494 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 DNAJB1P25685 340 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 U2AF2P26368 475 aaKnown RBP eCLIP6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 RFC5P40937 340 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 TECP42680 631 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 FAM189BP81408 668 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 MRPS5P82675 430 aaKnown RBP6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 LAMTOR4Q0VGL1 99 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 MSS51Q4VC12 460 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 PKDCCQ504Y2 493 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 TCEAL5Q5H9L2 206 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 SPOUT1Q5T280 376 aaKnown RBP6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 MAEAQ7L5Y9 396 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 OTUD6AQ7L8S5 288 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 CATSPER4Q7RTX7 472 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 ZNF410Q86VK4 478 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 ECHDC2Q86YB7 292 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 C4orf32Q8N8J7 132 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 KLHL23Q8NBE8 558 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 ASAP3Q8TDY4 903 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 SLC7A3Q8WY07 619 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 CLP1Q92989 425 aaKnown RBP6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 LPPQ93052 612 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 MRPL38Q96DV4 380 aaKnown RBP6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 NECAB3Q96P71 396 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 ASB2Q96Q27 587 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 JPH2Q9BR39 696 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 ATP6V0A4Q9HBG4 840 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 IFT122Q9HBG6 1241 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 C1orf112Q9NSG2 853 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 TYW1Q9NV66 732 aaKnown RBP6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 TMEM161AQ9NX61 479 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 LMCD1Q9NZU5 365 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 NOL7Q9UMY1 257 aaKnown RBP6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 PIN4Q9Y237 131 aaKnown RBP6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 PCDHB6Q9Y5E3 794 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 PCDHGC5Q9Y5F6 944 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 MEIS3P2A8K0S8 358 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 PP2D1A8MPX8 630 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 C5orf67F2Z3F1 127 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 LYPLA2O95372 231 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 RB1P06400 928 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 SFPQP23246 707 aaKnown RBP eCLIP6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 GTF2F1P35269 517 aaKnown RBP eCLIP6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 IRS1P35568 1242 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 PBX3P40426 434 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 TRAPPC10P48553 1259 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 RARRES1P49788 294 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 CAPSQ13938 189 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 CAMK1Q14012 370 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 ECM1Q16610 540 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 PTPROQ16827 1216 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 CLLU1OSQ5K130 101 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 TWF2Q6IBS0 349 aaKnown RBP6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 RNF19BQ6ZMZ0 732 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 LRRC55Q6ZSA7 311 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 EP400NLQ6ZTU2 488 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 FERMT3Q86UX7 667 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 CATSPER3Q86XQ3 398 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 RNF149Q8NC42 400 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 SPPL3Q8TCT6 385 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 NEK9Q8TD19 979 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 HELQQ8TDG4 1101 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 ADAMTS19Q8TE59 1207 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 ATXN2LQ8WWM7 1075 aaKnown RBP6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 PSPC1Q8WXF1 523 aaKnown RBP6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 HLA-CQ95604 372 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 CCDC43Q96MW1 224 aaKnown RBP6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 CASD1Q96PB1 797 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 C11orf84Q9BUA3 381 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 BACH2Q9BYV9 841 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 TMEM117Q9H0C3 514 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 CWH43Q9H720 699 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 UBE2ZQ9H832 354 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 POLD4Q9HCU8 107 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 GPRC5CQ9NQ84 441 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 PRDM9Q9NQV7 894 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 ANKEF1Q9NU02 776 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 PLAGL2Q9UPG8 496 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 SMC3Q9UQE7 1217 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 RWDD3Q9Y3V2 267 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 PLXNA4Q9HCM2 1894 aa6.42□□□□□ -1.38
HMGB1P20-201ENST00000402555 A0A0U1RQF3 1178 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 H3BQ06 376 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 H3BQV1 296 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 BMP1P13497 986 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 KCNA5P22460 613 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 GLRA2P23416 452 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 CDC25AP30304 524 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 CCT6AP40227 531 aaKnown RBP6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 PHKA2P46019 1235 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 MCM2P49736 904 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 CDC42EP1Q00587 391 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 ORC2Q13416 577 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 IL17AQ16552 155 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 TIGD5Q53EQ6 642 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 LARP1BQ659C4 914 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms