RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 PACSIN1Q9BY11 444 aa7.05□□□□□ -1.28
BDNF-203ENST00000395978 GOLPH3Q9H4A6 298 aa7.05□□□□□ -1.28
BDNF-203ENST00000395978 ANKEF1Q9NU02 776 aa7.05□□□□□ -1.28
BDNF-203ENST00000395978 SLC9A2Q9UBY0 812 aa7.05□□□□□ -1.28
BDNF-203ENST00000395978 CNOT7Q9UIV1 285 aaKnown RBP7.05□□□□□ -1.28
BDNF-203ENST00000395978 SCAF8Q9UPN6 1271 aaKnown RBP7.05□□□□□ -1.28
BDNF-203ENST00000395978 REXO2Q9Y3B8 237 aaKnown RBP7.05□□□□□ -1.28
BDNF-203ENST00000395978 FAM187AA6NFU0 413 aa7.05□□□□□ -1.28
BDNF-203ENST00000395978 PJA2O43164 708 aa7.05□□□□□ -1.28
BDNF-203ENST00000395978 DAPK3O43293 454 aa7.05□□□□□ -1.28
BDNF-203ENST00000395978 SASH3O75995 380 aa7.05□□□□□ -1.28
BDNF-203ENST00000395978 NEBLO76041 1014 aa7.05□□□□□ -1.28
BDNF-203ENST00000395978 ABL1P00519 1130 aa7.05□□□□□ -1.28
BDNF-203ENST00000395978 EZRP15311 586 aaKnown RBP7.05□□□□□ -1.28
BDNF-203ENST00000395978 TMOD1P28289 359 aa7.05□□□□□ -1.28
BDNF-203ENST00000395978 SNX16P57768 344 aa7.05□□□□□ -1.28
BDNF-203ENST00000395978 TFAMQ00059 246 aaKnown RBP7.05□□□□□ -1.28
BDNF-203ENST00000395978 SNRNP35Q16560 246 aaKnown RBP7.05□□□□□ -1.28
BDNF-203ENST00000395978 TATDN1Q6P1N9 297 aa7.05□□□□□ -1.28
BDNF-203ENST00000395978 XRRA1Q6P2D8 792 aa7.05□□□□□ -1.28
BDNF-203ENST00000395978 MICALL2Q8IY33 904 aa7.05□□□□□ -1.28
BDNF-203ENST00000395978 GPD1LQ8N335 351 aa7.05□□□□□ -1.28
BDNF-203ENST00000395978 ZNF564Q8TBZ8 553 aaPredicted RBP7.05□□□□□ -1.28
BDNF-203ENST00000395978 SLC35C1Q96A29 364 aa7.05□□□□□ -1.28
BDNF-203ENST00000395978 JPH1Q9HDC5 661 aaPredicted RBP7.05□□□□□ -1.28
BDNF-203ENST00000395978 GINM1Q9NU53 330 aa7.05□□□□□ -1.28
BDNF-203ENST00000395978 ADAM22Q9P0K1 906 aa7.05□□□□□ -1.28
BDNF-203ENST00000395978 SUCLA2Q9P2R7 463 aaPredicted RBP7.05□□□□□ -1.28
BDNF-203ENST00000395978 IGKV6D-41A0A0C4DH26 115 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 LRRIQ3A6PVS8 624 aaPredicted RBP7.04□□□□□ -1.28
BDNF-203ENST00000395978 CLDN3O15551 220 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 KRT15P19012 456 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 GUCY2CP25092 1073 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 CHRNA3P32297 505 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 XKR3Q5GH77 459 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 HYIQ5T013 277 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 KAZNQ674X7 775 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 APOBEC3FQ8IUX4 373 aaKnown RBP7.04□□□□□ -1.28
BDNF-203ENST00000395978 CCDC89Q8N998 374 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 ZNF280CQ8ND82 737 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 TPCN2Q8NHX9 752 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 MRRFQ96E11 262 aaKnown RBP7.04□□□□□ -1.28
BDNF-203ENST00000395978 NUP85Q9BW27 656 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 TLR10Q9BXR5 811 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 POLR3FQ9H1D9 316 aaPredicted RBP7.04□□□□□ -1.28
BDNF-203ENST00000395978 WNT8AQ9H1J5 351 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 INTS9Q9NV88 658 aaKnown RBP7.04□□□□□ -1.28
BDNF-203ENST00000395978 RCCD1A6NED2 376 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 FOXN3O00409 490 aaPredicted RBP7.04□□□□□ -1.28
BDNF-203ENST00000395978 RAD51CO43502 376 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 STAM2O75886 525 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 SRGAP2CP0DJJ0 459 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 LIG3P49916 1009 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 CXCL9Q07325 125 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 KCNMA1Q12791 1236 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 MYBPC2Q14324 1141 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 SURF1Q15526 300 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 ECM1Q16610 540 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 SPDYE2Q495Y8 402 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 PLA2G4FQ68DD2 849 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 POTEAQ6S8J7 498 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 SLC51AQ86UW1 340 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 BAP1Q92560 729 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 SLC5A5Q92911 643 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 MOV10L1Q9BXT6 1211 aaKnown RBP7.04□□□□□ -1.28
BDNF-203ENST00000395978 DEFB129Q9H1M3 183 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 ZNF302Q9NR11 478 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 ANAPC5Q9UJX4 755 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 C19orf81C9J6K1 198 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 H3BQF6 201 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 NFIBO00712 420 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 BUB1BO60566 1050 aaPredicted RBP7.04□□□□□ -1.28
BDNF-203ENST00000395978 RNF8O76064 485 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 VIL1P09327 827 aaKnown RBP7.04□□□□□ -1.28
BDNF-203ENST00000395978 CNGA1P29973 690 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 ALDH3A1P30838 453 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 CASP5P51878 434 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 PPP2R5CQ13362 524 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 SETDB1Q15047 1291 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 EZH2Q15910 746 aaKnown RBP7.04□□□□□ -1.28
BDNF-203ENST00000395978 FKBP1CQ5VVH2 108 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 DNAJC24Q6P3W2 148 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 BTNL9Q6UXG8 535 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 ZBTB33Q86T24 672 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 ANKRD42Q8N9B4 389 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 RDM1Q8NG50 284 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 ETNPPLQ8TBG4 499 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 MGARPQ8TDB4 240 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 SLC16A10Q8TF71 515 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 ATG4CQ96DT6 458 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 ATP6V1G3Q96LB4 118 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 CNOT10Q9H9A5 744 aaKnown RBP7.04□□□□□ -1.28
BDNF-203ENST00000395978 VPS37BQ9H9H4 285 aa7.04□□□□□ -1.28
BDNF-203ENST00000395978 MAP3K20Q9NYL2 800 aaKnown RBP7.04□□□□□ -1.28
BDNF-203ENST00000395978 AGO2Q9UKV8 859 aaKnown RBP7.04□□□□□ -1.28
BDNF-203ENST00000395978 PIK3CDO00329 1044 aa7.03□□□□□ -1.28
BDNF-203ENST00000395978 RASGRF2O14827 1237 aa7.03□□□□□ -1.28
BDNF-203ENST00000395978 CD58P19256 250 aa7.03□□□□□ -1.28
BDNF-203ENST00000395978 FECHP22830 423 aa7.03□□□□□ -1.28
BDNF-203ENST00000395978 STX2P32856 288 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms