RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 CAPN8A6NHC0 703 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 GOLIM4O00461 696 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 NRP2O60462 931 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 LY86O95711 162 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 SLC6A9P48067 706 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 CD69Q07108 199 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 NOMO1Q15155 1222 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 APOA5Q6Q788 366 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 STK32CQ86UX6 486 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 SKAP1Q86WV1 359 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 FAM186BQ8IYM0 893 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 VPS37AQ8NEZ2 397 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 SMARCC2Q8TAQ2 1214 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 RAB24Q969Q5 203 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 ZSWIM3Q96MP5 696 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 ZNF552Q9H707 407 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 ATP6V0A4Q9HBG4 840 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 NLRC4Q9NPP4 1024 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 PLCB1Q9NQ66 1216 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 POLR3BQ9NW08 1133 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 DNAI1Q9UI46 699 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 SIK3Q9Y2K2 1263 aa6.29□□□□□ -1.4
HMGB1P10-201ENST00000395823 ABHD14A-ACY1A0A1B0GW23 586 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 KLRG2A4D1S0 409 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 MAFGO15525 162 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 CYP2C8P10632 490 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 COL6A1P12109 1028 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 NCAM1P13591 858 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 XPAP23025 273 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 CTSSP25774 331 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 ADCY8P40145 1251 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 IL12RB1P42701 662 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 TRAPPC10P48553 1259 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 NCKAP1LP55160 1127 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 NRG3P56975 720 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 TARDBPQ13148 414 aaKnown RBP eCLIP6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 TMEM200BQ69YZ2 307 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 GRAMD4Q6IC98 578 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 Q6ZVL8 140 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 CBLL1Q75N03 491 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 MIGA2Q7L4E1 593 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 CXXC5Q7LFL8 322 aaKnown RBP6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 B3GNT8Q7Z7M8 397 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 FAM129CQ86XR2 697 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 GPR156Q8NFN8 814 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 LRTOMTQ8WZ04 291 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 NKD2Q969F2 451 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 SGCZQ96LD1 299 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 TBCBQ99426 244 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 MYD88Q99836 296 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 C22orf23Q9BZE7 217 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 RTEL1Q9NZ71 1219 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 DMTF1Q9Y222 760 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 PCDHA5Q9Y5H7 936 aa6.28□□□□□ -1.4
HMGB1P10-201ENST00000395823 A0A088AWK7 358 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 KNG1P01042 644 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 FOSP01100 380 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 FTLP02792 175 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 GLI1P08151 1106 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 HNRNPLP14866 589 aaKnown RBP eCLIP6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 ZKSCAN1P17029 563 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 IGFBP6P24592 240 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 PIK3CBP42338 1070 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 HK3P52790 923 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 CACNB3P54284 484 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 RAB1AP62820 205 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 MAP3K12Q12852 859 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 NOGQ13253 232 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 WDR72Q3MJ13 1102 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 ABHD15Q6UXT9 468 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 MAEAQ7L5Y9 396 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 DAAM2Q86T65 1068 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 ATG4DQ86TL0 474 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 IFNL2Q8IZJ0 200 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 PIK3C3Q8NEB9 887 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 SAMD11Q96NU1 681 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 NOX5Q96PH1 765 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 PTPN18Q99952 460 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 C7orf25Q9BPX7 421 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 OSBPL6Q9BZF3 934 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 CNTD2Q9H8S5 307 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 PPCSQ9HAB8 311 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 KMT5AQ9NQR1 393 aa6.27□□□□□ -1.41
HMGB1P10-201ENST00000395823 FAM171A2A8MVW0 826 aa6.26□□□□□ -1.41
HMGB1P10-201ENST00000395823 RASA4BC9J798 803 aa6.26□□□□□ -1.41
HMGB1P10-201ENST00000395823 RASA4O43374 803 aa6.26□□□□□ -1.41
HMGB1P10-201ENST00000395823 TCEA3O75764 348 aa6.26□□□□□ -1.41
HMGB1P10-201ENST00000395823 GAAP10253 952 aa6.26□□□□□ -1.41
HMGB1P10-201ENST00000395823 PRIM2P49643 509 aa6.26□□□□□ -1.41
HMGB1P10-201ENST00000395823 CDR1P51861 262 aa6.26□□□□□ -1.41
HMGB1P10-201ENST00000395823 SRSF3P84103 164 aaKnown RBP6.26□□□□□ -1.41
HMGB1P10-201ENST00000395823 MST1LQ2TV78 715 aa6.26□□□□□ -1.41
HMGB1P10-201ENST00000395823 INO80DQ53TQ3 878 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P10-201ENST00000395823 ZNF605Q86T29 641 aa6.26□□□□□ -1.41
HMGB1P10-201ENST00000395823 LDHDQ86WU2 507 aa6.26□□□□□ -1.41
HMGB1P10-201ENST00000395823 RHOT1Q8IXI2 618 aa6.26□□□□□ -1.41
HMGB1P10-201ENST00000395823 MSL3Q8N5Y2 521 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms