RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 TRIM25Q14258 630 aaKnown RBP4.88□□□□□ -1.63
TRAV40-201ENST00000390467 BROXQ5VW32 411 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 MFSD5Q6N075 450 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 Q6ZPA2 131 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 NPM2Q86SE8 214 aaKnown RBP4.88□□□□□ -1.63
TRAV40-201ENST00000390467 LDLRAD3Q86YD5 345 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 AHI1Q8N157 1196 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 LEO1Q8WVC0 666 aaPredicted RBP4.88□□□□□ -1.63
TRAV40-201ENST00000390467 GAB3Q8WWW8 586 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 CHFRQ96EP1 664 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 MNTQ99583 582 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 ANO3Q9BYT9 981 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 CPEB1Q9BZB8 566 aaKnown RBP4.88□□□□□ -1.63
TRAV40-201ENST00000390467 IKZF4Q9H2S9 585 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 SLITRK6Q9H5Y7 841 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 REXO2Q9Y3B8 237 aaKnown RBP4.88□□□□□ -1.63
TRAV40-201ENST00000390467 TBX22Q9Y458 520 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 XDHP47989 1333 aa4.88□□□□□ -1.63
TRAV40-201ENST00000390467 A0A1W2PR48 441 aa4.87□□□□□ -1.63
TRAV40-201ENST00000390467 MAFGO15525 162 aa4.87□□□□□ -1.63
TRAV40-201ENST00000390467 RPS6KA4O75676 772 aa4.87□□□□□ -1.63
TRAV40-201ENST00000390467 ADH4P08319 380 aa4.87□□□□□ -1.63
TRAV40-201ENST00000390467 KRT4P19013 534 aa4.87□□□□□ -1.63
TRAV40-201ENST00000390467 CASRP41180 1078 aa4.87□□□□□ -1.63
TRAV40-201ENST00000390467 OCRLQ01968 901 aa4.87□□□□□ -1.63
TRAV40-201ENST00000390467 MGAT5Q09328 741 aa4.87□□□□□ -1.63
TRAV40-201ENST00000390467 SART3Q15020 963 aaKnown RBP4.87□□□□□ -1.63
TRAV40-201ENST00000390467 DDB1Q16531 1140 aa4.87□□□□□ -1.63
TRAV40-201ENST00000390467 SLC41A1Q8IVJ1 513 aa4.87□□□□□ -1.63
TRAV40-201ENST00000390467 GSPT2Q8IYD1 628 aaKnown RBP4.87□□□□□ -1.63
TRAV40-201ENST00000390467 ST8SIA2Q92186 375 aa4.87□□□□□ -1.63
TRAV40-201ENST00000390467 SLC5A5Q92911 643 aa4.87□□□□□ -1.63
TRAV40-201ENST00000390467 TRPS1Q9UHF7 1281 aa4.87□□□□□ -1.63
TRAV40-201ENST00000390467 EVLQ9UI08 416 aaPredicted RBP4.87□□□□□ -1.63
TRAV40-201ENST00000390467 HOXA3O43365 443 aaPredicted RBP4.86□□□□□ -1.63
TRAV40-201ENST00000390467 IPO13O94829 963 aaKnown RBP4.86□□□□□ -1.63
TRAV40-201ENST00000390467 MYCLP1P12525 358 aaPredicted RBP4.86□□□□□ -1.63
TRAV40-201ENST00000390467 BPIP17213 487 aa4.86□□□□□ -1.63
TRAV40-201ENST00000390467 HK1P19367 917 aa4.86□□□□□ -1.63
TRAV40-201ENST00000390467 MAKP20794 623 aa4.86□□□□□ -1.63
TRAV40-201ENST00000390467 NR4A1P22736 598 aa4.86□□□□□ -1.63
TRAV40-201ENST00000390467 ID4P47928 161 aa4.86□□□□□ -1.63
TRAV40-201ENST00000390467 TGFB2P61812 414 aa4.86□□□□□ -1.63
TRAV40-201ENST00000390467 DPTQ07507 201 aa4.86□□□□□ -1.63
TRAV40-201ENST00000390467 RABL3Q5HYI8 236 aa4.86□□□□□ -1.63
TRAV40-201ENST00000390467 PITRM1Q5JRX3 1037 aa4.86□□□□□ -1.63
TRAV40-201ENST00000390467 CCDC62Q6P9F0 684 aa4.86□□□□□ -1.63
TRAV40-201ENST00000390467 PCSK4Q6UW60 755 aa4.86□□□□□ -1.63
TRAV40-201ENST00000390467 LSM14BQ9BX40 385 aaKnown RBP4.86□□□□□ -1.63
TRAV40-201ENST00000390467 NUMBLQ9Y6R0 609 aa4.86□□□□□ -1.63
TRAV40-201ENST00000390467 OVOL3O00110 214 aa4.85□□□□□ -1.63
TRAV40-201ENST00000390467 NRP1O14786 923 aa4.85□□□□□ -1.63
TRAV40-201ENST00000390467 MFAP3LO75121 409 aa4.85□□□□□ -1.63
TRAV40-201ENST00000390467 TMEM127O75204 238 aa4.85□□□□□ -1.63
TRAV40-201ENST00000390467 PEX11BO96011 259 aa4.85□□□□□ -1.63
TRAV40-201ENST00000390467 GNAT2P19087 354 aa4.85□□□□□ -1.63
TRAV40-201ENST00000390467 ZFP36P26651 326 aaKnown RBP4.85□□□□□ -1.63
TRAV40-201ENST00000390467 GPR15P49685 360 aa4.85□□□□□ -1.63
TRAV40-201ENST00000390467 PDCD1Q15116 288 aa4.85□□□□□ -1.63
TRAV40-201ENST00000390467 ATP13A4Q4VNC1 1196 aa4.85□□□□□ -1.63
TRAV40-201ENST00000390467 PLEKHG4Q58EX7 1191 aa4.85□□□□□ -1.63
TRAV40-201ENST00000390467 DCAF17Q5H9S7 520 aaPredicted RBP4.85□□□□□ -1.63
TRAV40-201ENST00000390467 NAIF1Q69YI7 327 aaPredicted RBP4.85□□□□□ -1.63
TRAV40-201ENST00000390467 ZNF662Q6ZS27 426 aa4.85□□□□□ -1.63
TRAV40-201ENST00000390467 FRMD7Q6ZUT3 714 aa4.85□□□□□ -1.63
TRAV40-201ENST00000390467 APBB1IPQ7Z5R6 666 aaPredicted RBP4.85□□□□□ -1.63
TRAV40-201ENST00000390467 RNF180Q86T96 592 aa4.85□□□□□ -1.63
TRAV40-201ENST00000390467 C11orf74Q86VG3 221 aa4.85□□□□□ -1.63
TRAV40-201ENST00000390467 THNSL2Q86YJ6 484 aa4.85□□□□□ -1.63
TRAV40-201ENST00000390467 NRDE2Q9H7Z3 1164 aa4.85□□□□□ -1.63
TRAV40-201ENST00000390467 PRSS50Q9UI38 385 aa4.85□□□□□ -1.63
TRAV40-201ENST00000390467 MAPRE3Q9UPY8 281 aa4.85□□□□□ -1.63
TRAV40-201ENST00000390467 GOLGA6L6A8MZA4 724 aa4.84□□□□□ -1.63
TRAV40-201ENST00000390467 NEMP1O14524 444 aa4.84□□□□□ -1.63
TRAV40-201ENST00000390467 LPLP06858 475 aa4.84□□□□□ -1.63
TRAV40-201ENST00000390467 MRPL49Q13405 166 aaKnown RBP4.84□□□□□ -1.63
TRAV40-201ENST00000390467 UBE3CQ15386 1083 aa4.84□□□□□ -1.63
TRAV40-201ENST00000390467 CCDC178Q5BJE1 867 aa4.84□□□□□ -1.63
TRAV40-201ENST00000390467 CT83Q5H943 113 aa4.84□□□□□ -1.63
TRAV40-201ENST00000390467 LMBR1LQ6UX01 489 aa4.84□□□□□ -1.63
TRAV40-201ENST00000390467 RHOUQ7L0Q8 258 aa4.84□□□□□ -1.63
TRAV40-201ENST00000390467 TAS1R1Q7RTX1 841 aa4.84□□□□□ -1.63
TRAV40-201ENST00000390467 STRA8Q7Z7C7 330 aa4.84□□□□□ -1.63
TRAV40-201ENST00000390467 MRGPREQ86SM8 312 aa4.84□□□□□ -1.63
TRAV40-201ENST00000390467 LILRA3Q8N6C8 439 aaPredicted RBP4.84□□□□□ -1.63
TRAV40-201ENST00000390467 CLRN3Q8NCR9 226 aa4.84□□□□□ -1.63
TRAV40-201ENST00000390467 OR52N2Q8NGI0 321 aa4.84□□□□□ -1.63
TRAV40-201ENST00000390467 OR5M3Q8NGP4 307 aa4.84□□□□□ -1.63
TRAV40-201ENST00000390467 SLC25A43Q8WUT9 341 aaPredicted RBP4.84□□□□□ -1.63
TRAV40-201ENST00000390467 IL17RAQ96F46 866 aa4.84□□□□□ -1.63
TRAV40-201ENST00000390467 KCTD10Q9H3F6 313 aa4.84□□□□□ -1.63
TRAV40-201ENST00000390467 TOPORSQ9NS56 1045 aaPredicted RBP4.84□□□□□ -1.63
TRAV40-201ENST00000390467 SORCS3Q9UPU3 1222 aa4.84□□□□□ -1.63
TRAV40-201ENST00000390467 CDY2AQ9Y6F7 541 aa4.84□□□□□ -1.63
TRAV40-201ENST00000390467 WDR33Q9C0J8 1336 aaKnown RBP4.83□□□□□ -1.64
TRAV40-201ENST00000390467 NRP2O60462 931 aa4.83□□□□□ -1.64
TRAV40-201ENST00000390467 GYS2P54840 703 aa4.83□□□□□ -1.64
TRAV40-201ENST00000390467 INHBCP55103 352 aa4.83□□□□□ -1.64
TRAV40-201ENST00000390467 DUSP2Q05923 314 aa4.83□□□□□ -1.64
TRAV40-201ENST00000390467 DHCR24Q15392 516 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms