RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 NDUFAF2Q8N183 169 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 AP5M1Q9H0R1 490 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 SUFUQ9UMX1 484 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 SLC16A3O15427 465 aaKnown RBP18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 ATP2C1P98194 919 aaPredicted RBP18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 TMEM270Q6UE05 265 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 PIGOQ8TEQ8 1089 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 PARD3BQ8TEW8 1205 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 RNF25Q96BH1 459 aaPredicted RBP18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 C11orf70Q9BRQ4 267 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 USP21Q9UK80 565 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 NSUN2Q08J23 767 aaKnown RBP eCLIP18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 TSGA10IPQ3SY00 556 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 RWDD4Q6NW29 188 aaKnown RBP18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 EML4Q9HC35 981 aaKnown RBP18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 TTC7AQ9ULT0 858 aaPredicted RBP18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 CLRN2A0PK11 232 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 DPP9Q86TI2 863 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 NLGN1Q8N2Q7 840 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 OR9Q1Q8NGQ5 310 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 OR6B3Q8NGW1 331 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 PPCSQ9HAB8 311 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 TCP11X1B4DZS4 312 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 PIK3R2O00459 728 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 ANP32DO95626 131 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 DNAL1Q4LDG9 190 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 PASD1Q8IV76 773 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 USP17L5A8MUK1 530 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 GPC3P51654 580 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 CUL3Q13618 768 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 ITPRIPL1Q6GPH6 555 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 FAM167AQ96KS9 214 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 PHF2O75151 1096 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 CHN1P15882 459 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 CCND1P24385 295 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 AP1B1Q10567 949 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 TXNRD1Q16881 649 aa18.16■□□□□ 0.5
SNAPC3-202ENST00000380821 IL10P22301 178 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 SERPINB10P48595 397 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 BARHL2Q9NY43 387 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 FGFR4P22455 802 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 NFKBIAP25963 317 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 CDC27P30260 824 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 GNA15P30679 374 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 HEATR6Q6AI08 1181 aaKnown RBP18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 PODNQ7Z5L7 613 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 GIMAP8Q8ND71 665 aaPredicted RBP18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 SNX19Q92543 992 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 NAF1Q96HR8 494 aaKnown RBP18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 RNPC3Q96LT9 517 aaKnown RBP18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 CCT8L2Q96SF2 557 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 TBC1D22BQ9NU19 505 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 KIF28PB7ZC32 967 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 APBA3O96018 575 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 HABP4Q5JVS0 413 aaKnown RBP18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 ANGPTL8Q6UXH0 198 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 KRT27Q7Z3Y8 459 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 LONP2Q86WA8 852 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 HEY1Q9Y5J3 304 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 RTN2O75298 545 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 CAPRIN1Q14444 709 aaKnown RBP18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 E4F1Q66K89 784 aaPredicted RBP18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 TTC39CQ8N584 583 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 TRABDQ9H4I3 376 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 ZNF212Q9UDV6 495 aa18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 USP15Q9Y4E8 981 aaPredicted RBP18.15■□□□□ 0.5
SNAPC3-202ENST00000380821 KIAA1755Q5JYT7 1200 aa18.14■□□□□ 0.5
SNAPC3-202ENST00000380821 SULF1Q8IWU6 871 aa18.14■□□□□ 0.5
SNAPC3-202ENST00000380821 MTRQ99707 1265 aa18.14■□□□□ 0.5
SNAPC3-202ENST00000380821 AGPAT1Q99943 283 aa18.14■□□□□ 0.5
SNAPC3-202ENST00000380821 TMEM47Q9BQJ4 181 aa18.14■□□□□ 0.5
SNAPC3-202ENST00000380821 PARVAQ9NVD7 372 aa18.14■□□□□ 0.5
SNAPC3-202ENST00000380821 ENAHQ8N8S7 591 aaPredicted RBP18.14■□□□□ 0.49
SNAPC3-202ENST00000380821 SH3RF3Q8TEJ3 882 aaPredicted RBP18.14■□□□□ 0.49
SNAPC3-202ENST00000380821 PBXIP1Q96AQ6 731 aa18.14■□□□□ 0.49
SNAPC3-202ENST00000380821 COG4Q9H9E3 785 aa18.14■□□□□ 0.49
SNAPC3-202ENST00000380821 EHD2Q9NZN4 543 aa18.14■□□□□ 0.49
SNAPC3-202ENST00000380821 MTMR1Q13613 665 aa18.14■□□□□ 0.49
SNAPC3-202ENST00000380821 DAB2IPQ5VWQ8 1189 aa18.14■□□□□ 0.49
SNAPC3-202ENST00000380821 CCNI2Q6ZMN8 369 aaPredicted RBP18.14■□□□□ 0.49
SNAPC3-202ENST00000380821 IFT43Q96FT9 208 aa18.14■□□□□ 0.49
SNAPC3-202ENST00000380821 ASPSCR1Q9BZE9 553 aa18.14■□□□□ 0.49
SNAPC3-202ENST00000380821 HSPA2P54652 639 aa18.14■□□□□ 0.49
SNAPC3-202ENST00000380821 GRAPQ13588 217 aa18.14■□□□□ 0.49
SNAPC3-202ENST00000380821 IMPG1Q17R60 797 aa18.14■□□□□ 0.49
SNAPC3-202ENST00000380821 METTL16Q86W50 562 aaKnown RBP18.14■□□□□ 0.49
SNAPC3-202ENST00000380821 ATL2Q8NHH9 583 aa18.14■□□□□ 0.49
SNAPC3-202ENST00000380821 GRAPLQ8TC17 118 aaPredicted RBP18.14■□□□□ 0.49
SNAPC3-202ENST00000380821 FBXO2Q9UK22 296 aaPredicted RBP18.14■□□□□ 0.49
SNAPC3-202ENST00000380821 TMCC1O94876 653 aa18.14■□□□□ 0.49
SNAPC3-202ENST00000380821 CCDC90BQ9GZT6 254 aa18.14■□□□□ 0.49
SNAPC3-202ENST00000380821 CDC42BPGQ6DT37 1551 aa18.13■□□□□ 0.49
SNAPC3-202ENST00000380821 CLDN3O15551 220 aa18.13■□□□□ 0.49
SNAPC3-202ENST00000380821 DNAJC6O75061 913 aa18.13■□□□□ 0.49
SNAPC3-202ENST00000380821 SDC4P31431 198 aa18.13■□□□□ 0.49
SNAPC3-202ENST00000380821 AP3M2P53677 418 aa18.13■□□□□ 0.49
SNAPC3-202ENST00000380821 DSTYKQ6XUX3 929 aa18.13■□□□□ 0.49
SNAPC3-202ENST00000380821 ARMCX6Q7L4S7 300 aa18.13■□□□□ 0.49
SNAPC3-202ENST00000380821 CCNYL1Q8N7R7 359 aa18.13■□□□□ 0.49
SNAPC3-202ENST00000380821 CYP4F11Q9HBI6 524 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms