RNA–Protein interactions for RNA: ENST00000376497.7

CLCN6-207, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 3 BASIC

Gene CLCN6, Length 814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-207ENST00000376497 FAM20AQ96MK3 541 aa17.13■□□□□ 0.33
CLCN6-207ENST00000376497 DHX33Q9H6R0 707 aaKnown RBP17.13■□□□□ 0.33
CLCN6-207ENST00000376497 KCNMB3Q9NPA1 279 aa17.13■□□□□ 0.33
CLCN6-207ENST00000376497 LIMD1Q9UGP4 676 aa17.13■□□□□ 0.33
CLCN6-207ENST00000376497 VAV3Q9UKW4 847 aa17.13■□□□□ 0.33
CLCN6-207ENST00000376497 COL4A3BPQ9Y5P4 624 aa17.13■□□□□ 0.33
CLCN6-207ENST00000376497 TDRD15B5MCY1 1934 aaKnown RBP17.12■□□□□ 0.33
CLCN6-207ENST00000376497 H0Y858 1186 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 B4GALT3O60512 393 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 GFRA3O60609 400 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 LILRB3O75022 631 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 DDHD2O94830 711 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 CTDNEP1O95476 244 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 ALDH2P05091 517 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 P4HBP07237 508 aaKnown RBP17.12■□□□□ 0.33
CLCN6-207ENST00000376497 ASGR2P07307 311 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 AK2P54819 239 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 NPEPPSP55786 919 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 LETM2Q2VYF4 491 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 PPP4R3AQ6IN85 833 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 CPLX2Q6PUV4 134 aaKnown RBP17.12■□□□□ 0.33
CLCN6-207ENST00000376497 CABP7Q86V35 215 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 NECAB1Q8N987 351 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 ZNF579Q8NAF0 562 aaKnown RBP17.12■□□□□ 0.33
CLCN6-207ENST00000376497 URGCPQ8TCY9 931 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 SLC7A3Q8WY07 619 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 KLHL5Q96PQ7 755 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 TMEM175Q9BSA9 504 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 GBP3Q9H0R5 595 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 SMOC2Q9H3U7 446 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 SFXN1Q9H9B4 322 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 KANSL3Q9P2N6 904 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 KCNJ14Q9UNX9 436 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 CNTNAP2Q9UHC6 1331 aa17.12■□□□□ 0.33
CLCN6-207ENST00000376497 PROB1E7EW31 1015 aa17.11■□□□□ 0.33
CLCN6-207ENST00000376497 HOXA11P31270 313 aaPredicted RBP17.11■□□□□ 0.33
CLCN6-207ENST00000376497 CLCN4P51793 760 aa17.11■□□□□ 0.33
CLCN6-207ENST00000376497 UBXN11Q5T124 520 aa17.11■□□□□ 0.33
CLCN6-207ENST00000376497 TMC5Q6UXY8 1006 aa17.11■□□□□ 0.33
CLCN6-207ENST00000376497 GPR149Q86SP6 731 aa17.11■□□□□ 0.33
CLCN6-207ENST00000376497 C4orf19Q8IY42 314 aa17.11■□□□□ 0.33
CLCN6-207ENST00000376497 TMEM105Q8N8V8 129 aa17.11■□□□□ 0.33
CLCN6-207ENST00000376497 FEZF2Q8TBJ5 459 aa17.11■□□□□ 0.33
CLCN6-207ENST00000376497 PSPC1Q8WXF1 523 aaKnown RBP17.11■□□□□ 0.33
CLCN6-207ENST00000376497 CEP170P1Q96L14 293 aa17.11■□□□□ 0.33
CLCN6-207ENST00000376497 PHF20Q9BVI0 1012 aa17.11■□□□□ 0.33
CLCN6-207ENST00000376497 EMILIN2Q9BXX0 1053 aa17.11■□□□□ 0.33
CLCN6-207ENST00000376497 MINDY3Q9H8M7 445 aa17.11■□□□□ 0.33
CLCN6-207ENST00000376497 RSAD1Q9HA92 442 aa17.11■□□□□ 0.33
CLCN6-207ENST00000376497 WRAP73Q9P2S5 460 aaPredicted RBP17.11■□□□□ 0.33
CLCN6-207ENST00000376497 FAN1Q9Y2M0 1017 aa17.11■□□□□ 0.33
CLCN6-207ENST00000376497 MTCL1Q9Y4B5 1905 aaKnown RBP17.11■□□□□ 0.33
CLCN6-207ENST00000376497 TBX3O15119 743 aa17.1■□□□□ 0.33
CLCN6-207ENST00000376497 ASAP2O43150 1006 aa17.1■□□□□ 0.33
CLCN6-207ENST00000376497 GAS2O43903 313 aaKnown RBP17.1■□□□□ 0.33
CLCN6-207ENST00000376497 CNPP09543 421 aaKnown RBP17.1■□□□□ 0.33
CLCN6-207ENST00000376497 GCFC2P16383 781 aaKnown RBP17.1■□□□□ 0.33
CLCN6-207ENST00000376497 NCLP19338 710 aaKnown RBP17.1■□□□□ 0.33
CLCN6-207ENST00000376497 RFC5P40937 340 aa17.1■□□□□ 0.33
CLCN6-207ENST00000376497 AFF1P51825 1210 aaKnown RBP17.1■□□□□ 0.33
CLCN6-207ENST00000376497 EPHA7Q15375 998 aa17.1■□□□□ 0.33
CLCN6-207ENST00000376497 NEK8Q86SG6 692 aa17.1■□□□□ 0.33
CLCN6-207ENST00000376497 TCP11Q8WWU5 503 aa17.1■□□□□ 0.33
CLCN6-207ENST00000376497 PRPF31Q8WWY3 499 aaKnown RBP17.1■□□□□ 0.33
CLCN6-207ENST00000376497 TMEM143Q96AN5 459 aa17.1■□□□□ 0.33
CLCN6-207ENST00000376497 ACSF2Q96CM8 615 aaPredicted RBP17.1■□□□□ 0.33
CLCN6-207ENST00000376497 FAM193BQ96PV7 902 aaPredicted RBP17.1■□□□□ 0.33
CLCN6-207ENST00000376497 SLKQ9H2G2 1235 aaPredicted RBP17.1■□□□□ 0.33
CLCN6-207ENST00000376497 CCDC194A0A1B0GVG4 234 aa17.09■□□□□ 0.33
CLCN6-207ENST00000376497 NRP1O14786 923 aa17.09■□□□□ 0.33
CLCN6-207ENST00000376497 PFKFB2O60825 505 aa17.09■□□□□ 0.33
CLCN6-207ENST00000376497 SRGAP2CP0DJJ0 459 aa17.09■□□□□ 0.33
CLCN6-207ENST00000376497 KLRC2P26717 231 aa17.09■□□□□ 0.33
CLCN6-207ENST00000376497 CLCN5P51795 746 aa17.09■□□□□ 0.33
CLCN6-207ENST00000376497 LAMTOR4Q0VGL1 99 aa17.09■□□□□ 0.33
CLCN6-207ENST00000376497 ME3Q16798 604 aa17.09■□□□□ 0.33
CLCN6-207ENST00000376497 ASTLQ6HA08 431 aaPredicted RBP17.09■□□□□ 0.33
CLCN6-207ENST00000376497 C15orf39Q6ZRI6 1047 aa17.09■□□□□ 0.33
CLCN6-207ENST00000376497 CNNM3Q8NE01 707 aa17.09■□□□□ 0.33
CLCN6-207ENST00000376497 HAS1Q92839 578 aa17.09■□□□□ 0.33
CLCN6-207ENST00000376497 UBN1Q9NPG3 1134 aa17.09■□□□□ 0.33
CLCN6-207ENST00000376497 MRPL17Q9NRX2 175 aaKnown RBP17.09■□□□□ 0.33
CLCN6-207ENST00000376497 POMCP01189 267 aa17.08■□□□□ 0.32
CLCN6-207ENST00000376497 SOD2P04179 222 aa17.08■□□□□ 0.32
CLCN6-207ENST00000376497 YWHABP31946 246 aaKnown RBP17.08■□□□□ 0.32
CLCN6-207ENST00000376497 ST3GAL1Q11201 340 aa17.08■□□□□ 0.32
CLCN6-207ENST00000376497 PCBP1Q15365 356 aaKnown RBP eCLIP17.08■□□□□ 0.32
CLCN6-207ENST00000376497 CCDC149Q6ZUS6 474 aa17.08■□□□□ 0.32
CLCN6-207ENST00000376497 OTUD6AQ7L8S5 288 aa17.08■□□□□ 0.32
CLCN6-207ENST00000376497 OTOP3Q7RTS5 596 aa17.08■□□□□ 0.32
CLCN6-207ENST00000376497 FERMT3Q86UX7 667 aa17.08■□□□□ 0.32
CLCN6-207ENST00000376497 SMG8Q8ND04 991 aaKnown RBP17.08■□□□□ 0.32
CLCN6-207ENST00000376497 OXER1Q8TDS5 423 aa17.08■□□□□ 0.32
CLCN6-207ENST00000376497 NAP1L4Q99733 375 aaKnown RBP17.08■□□□□ 0.32
CLCN6-207ENST00000376497 LXNQ9BS40 222 aa17.08■□□□□ 0.32
CLCN6-207ENST00000376497 SSX2IPQ9Y2D8 614 aa17.08■□□□□ 0.32
CLCN6-207ENST00000376497 CACNA1HO95180 2353 aa17.08■□□□□ 0.32
CLCN6-207ENST00000376497 FAM205CA6NFA0 338 aa17.07■□□□□ 0.32
CLCN6-207ENST00000376497 INPPL1O15357 1258 aa17.07■□□□□ 0.32
CLCN6-207ENST00000376497 CCNT1O60563 726 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms