RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 DALRD3Q5D0E6 543 aaKnown RBP19.55■□□□□ 0.72
CD40-201ENST00000372276 SPDYCQ5MJ68 293 aa19.55■□□□□ 0.72
CD40-201ENST00000372276 PHLDB3Q6NSJ2 640 aa19.55■□□□□ 0.72
CD40-201ENST00000372276 CDAN1Q8IWY9 1227 aa19.55■□□□□ 0.72
CD40-201ENST00000372276 IL31RAQ8NI17 732 aa19.55■□□□□ 0.72
CD40-201ENST00000372276 GDAP1L1Q96MZ0 367 aa19.55■□□□□ 0.72
CD40-201ENST00000372276 MOV10L1Q9BXT6 1211 aaKnown RBP19.55■□□□□ 0.72
CD40-201ENST00000372276 UBE2TQ9NPD8 197 aaPredicted RBP19.55■□□□□ 0.72
CD40-201ENST00000372276 C19orf81C9J6K1 198 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 FOXN3O00409 490 aaPredicted RBP19.54■□□□□ 0.72
CD40-201ENST00000372276 RTN2O75298 545 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 DNA2P51530 1060 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 XKR9Q5GH70 373 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 EMC10Q5UCC4 262 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 VSIG10LQ86VR7 867 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 UBL4BQ8N7F7 174 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 MCPH1Q8NEM0 835 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 CASKIN2Q8WXE0 1202 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 RPS6KC1Q96S38 1066 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 RPAP3Q9H6T3 665 aaPredicted RBP19.54■□□□□ 0.72
CD40-201ENST00000372276 NFASCO94856 1347 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 VWA5AO00534 786 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 SART1O43290 800 aaKnown RBP19.54■□□□□ 0.72
CD40-201ENST00000372276 MTA2O94776 668 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 GGPS1O95749 300 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 EIF2AK2P19525 551 aaKnown RBP19.54■□□□□ 0.72
CD40-201ENST00000372276 GBP1P32455 592 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 GPC5P78333 572 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 SKOR1P84550 965 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 ARHGAP44Q17R89 818 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 ENOSF1Q7L5Y1 443 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 MAP4K3Q8IVH8 894 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 KLHL7Q8IXQ5 586 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 EFCAB13Q8IY85 973 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 OLIG1Q8TAK6 271 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 C12orf42Q96LP6 360 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 RUNDC3BQ96NL0 473 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 RAB17Q9H0T7 212 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.54■□□□□ 0.72
CD40-201ENST00000372276 TBX20Q9UMR3 447 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 COQ4Q9Y3A0 265 aa19.54■□□□□ 0.72
CD40-201ENST00000372276 KIAA0391O15091 583 aaKnown RBP19.53■□□□□ 0.72
CD40-201ENST00000372276 BUB1BO60566 1050 aaPredicted RBP19.53■□□□□ 0.72
CD40-201ENST00000372276 PPFIA4O75335 1185 aa19.53■□□□□ 0.72
CD40-201ENST00000372276 MYCLP12524 364 aaPredicted RBP19.53■□□□□ 0.72
CD40-201ENST00000372276 PEX3P56589 373 aa19.53■□□□□ 0.72
CD40-201ENST00000372276 BACE1P56817 501 aa19.53■□□□□ 0.72
CD40-201ENST00000372276 PLS1Q14651 629 aa19.53■□□□□ 0.72
CD40-201ENST00000372276 KRT39Q6A163 491 aa19.53■□□□□ 0.72
CD40-201ENST00000372276 RDH13Q8NBN7 331 aa19.53■□□□□ 0.72
CD40-201ENST00000372276 NSUN6Q8TEA1 469 aaKnown RBP19.53■□□□□ 0.72
CD40-201ENST00000372276 SEC14L1Q92503 715 aa19.53■□□□□ 0.72
CD40-201ENST00000372276 KCNN1Q92952 543 aa19.53■□□□□ 0.72
CD40-201ENST00000372276 FAM107BQ9H098 131 aa19.53■□□□□ 0.72
CD40-201ENST00000372276 KIAA1586Q9HCI6 787 aa19.53■□□□□ 0.72
CD40-201ENST00000372276 TMEM8AQ9HCN3 771 aa19.53■□□□□ 0.72
CD40-201ENST00000372276 PKD2L1Q9P0L9 805 aa19.53■□□□□ 0.72
CD40-201ENST00000372276 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.53■□□□□ 0.72
CD40-201ENST00000372276 ZNF112Q9UJU3 913 aa19.53■□□□□ 0.72
CD40-201ENST00000372276 UTP11Q9Y3A2 253 aaKnown RBP19.53■□□□□ 0.72
CD40-201ENST00000372276 FAM187AA6NFU0 413 aa19.52■□□□□ 0.72
CD40-201ENST00000372276 GOLGA6L10A6NI86 522 aa19.52■□□□□ 0.72
CD40-201ENST00000372276 ATP2A1O14983 1001 aa19.52■□□□□ 0.72
CD40-201ENST00000372276 ZC3H11AO75152 810 aaKnown RBP eCLIP19.52■□□□□ 0.72
CD40-201ENST00000372276 ERLIN2O94905 339 aa19.52■□□□□ 0.72
CD40-201ENST00000372276 PSAPP07602 524 aa19.52■□□□□ 0.72
CD40-201ENST00000372276 FAM102BQ5T8I3 360 aa19.52■□□□□ 0.72
CD40-201ENST00000372276 FAM71AQ8IYT1 594 aa19.52■□□□□ 0.72
CD40-201ENST00000372276 SCYL3Q8IZE3 742 aa19.52■□□□□ 0.72
CD40-201ENST00000372276 TSEN2Q8NCE0 465 aaKnown RBP19.52■□□□□ 0.72
CD40-201ENST00000372276 ZFP91Q96JP5 570 aaPredicted RBP19.52■□□□□ 0.72
CD40-201ENST00000372276 PCIF1Q9H4Z3 704 aa19.52■□□□□ 0.72
CD40-201ENST00000372276 RNF146Q9NTX7 359 aa19.52■□□□□ 0.72
CD40-201ENST00000372276 SYNGAP1Q96PV0 1343 aa19.52■□□□□ 0.71
CD40-201ENST00000372276 FER1L6Q2WGJ9 1857 aa19.52■□□□□ 0.71
CD40-201ENST00000372276 HMGB1P1B2RPK0 211 aaPredicted RBP19.51■□□□□ 0.71
CD40-201ENST00000372276 BACH1O14867 736 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 DGAT1O75907 488 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 GARTP22102 1010 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 GPC3P51654 580 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 PPP3CAQ08209 521 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 MTMR2Q13614 643 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 DHX34Q14147 1143 aaKnown RBP19.51■□□□□ 0.71
CD40-201ENST00000372276 SMYD5Q6GMV2 418 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 TMEM161BQ8NDZ6 487 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 ZIM3Q96PE6 472 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 CBWD1Q9BRT8 395 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 CAPS2Q9BXY5 557 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 IKZF4Q9H2S9 585 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 KMT5AQ9NQR1 393 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 PICK1Q9NRD5 415 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 SEPT11Q9NVA2 429 aaKnown RBP19.51■□□□□ 0.71
CD40-201ENST00000372276 DOCK1Q14185 1865 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 MYPNQ86TC9 1320 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 LTBP3Q9NS15 1303 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 SLC16A4O15374 487 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 DDX3YO15523 660 aaKnown RBP19.51■□□□□ 0.71
CD40-201ENST00000372276 NR3C2P08235 984 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 GCLMP48507 274 aa19.51■□□□□ 0.71
CD40-201ENST00000372276 HLTFQ14527 1009 aaKnown RBP eCLIP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms