RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 IFT74Q96LB3 600 aa22.14■■□□□ 1.13
TMEM53-205ENST00000372244 USP28Q96RU2 1077 aa22.14■■□□□ 1.13
TMEM53-205ENST00000372244 EIF2AQ9BY44 585 aaKnown RBP22.14■■□□□ 1.13
TMEM53-205ENST00000372244 CCSER1Q9C0I3 900 aa22.14■■□□□ 1.13
TMEM53-205ENST00000372244 CCDC113Q9H0I3 377 aa22.14■■□□□ 1.13
TMEM53-205ENST00000372244 PRMT7Q9NVM4 692 aaPredicted RBP22.14■■□□□ 1.13
TMEM53-205ENST00000372244 FBXO2Q9UK22 296 aaPredicted RBP22.14■■□□□ 1.13
TMEM53-205ENST00000372244 HSP90AA1P07900 732 aaKnown RBP22.13■■□□□ 1.13
TMEM53-205ENST00000372244 LAG3P18627 525 aa22.13■■□□□ 1.13
TMEM53-205ENST00000372244 GUCY2CP25092 1073 aa22.13■■□□□ 1.13
TMEM53-205ENST00000372244 DNAJB1P25685 340 aa22.13■■□□□ 1.13
TMEM53-205ENST00000372244 MARCKSP29966 332 aaPredicted RBP22.13■■□□□ 1.13
TMEM53-205ENST00000372244 MAPK7Q13164 816 aa22.13■■□□□ 1.13
TMEM53-205ENST00000372244 CSPP1Q1MSJ5 1256 aa22.13■■□□□ 1.13
TMEM53-205ENST00000372244 LONRF3Q496Y0 759 aa22.13■■□□□ 1.13
TMEM53-205ENST00000372244 SPOUT1Q5T280 376 aaKnown RBP22.13■■□□□ 1.13
TMEM53-205ENST00000372244 GLB1LQ6UWU2 654 aa22.13■■□□□ 1.13
TMEM53-205ENST00000372244 ZBTB8OSQ8IWT0 167 aa22.13■■□□□ 1.13
TMEM53-205ENST00000372244 LRRC15Q8TF66 581 aa22.13■■□□□ 1.13
TMEM53-205ENST00000372244 ATXN2LQ8WWM7 1075 aaKnown RBP22.13■■□□□ 1.13
TMEM53-205ENST00000372244 CDK5RAP3Q96JB5 506 aa22.13■■□□□ 1.13
TMEM53-205ENST00000372244 NTPCRQ9BSD7 190 aaKnown RBP22.13■■□□□ 1.13
TMEM53-205ENST00000372244 TIPINQ9BVW5 301 aa22.13■■□□□ 1.13
TMEM53-205ENST00000372244 C17orf75Q9HAS0 396 aa22.13■■□□□ 1.13
TMEM53-205ENST00000372244 KCND2Q9NZV8 630 aa22.13■■□□□ 1.13
TMEM53-205ENST00000372244 COL4A4P53420 1690 aaPredicted RBP22.13■■□□□ 1.13
TMEM53-205ENST00000372244 ACKR2O00590 384 aa22.12■■□□□ 1.13
TMEM53-205ENST00000372244 HIP1RO75146 1068 aa22.12■■□□□ 1.13
TMEM53-205ENST00000372244 PLA2G4BP0C869 781 aa22.12■■□□□ 1.13
TMEM53-205ENST00000372244 NASPP49321 788 aaPredicted RBP22.12■■□□□ 1.13
TMEM53-205ENST00000372244 EFNA5P52803 228 aa22.12■■□□□ 1.13
TMEM53-205ENST00000372244 ARSHQ5FYA8 562 aa22.12■■□□□ 1.13
TMEM53-205ENST00000372244 KCNT2Q6UVM3 1135 aa22.12■■□□□ 1.13
TMEM53-205ENST00000372244 CALML4Q96GE6 196 aa22.12■■□□□ 1.13
TMEM53-205ENST00000372244 MRPL9Q9BYD2 267 aaKnown RBP22.12■■□□□ 1.13
TMEM53-205ENST00000372244 IPPQ9Y573 584 aa22.12■■□□□ 1.13
TMEM53-205ENST00000372244 TTLL13PA6NNM8 815 aa22.11■■□□□ 1.13
TMEM53-205ENST00000372244 FGF18O76093 207 aa22.11■■□□□ 1.13
TMEM53-205ENST00000372244 NPTX2P47972 431 aa22.11■■□□□ 1.13
TMEM53-205ENST00000372244 CEBPZQ03701 1054 aaKnown RBP22.11■■□□□ 1.13
TMEM53-205ENST00000372244 MAPK6Q16659 721 aa22.11■■□□□ 1.13
TMEM53-205ENST00000372244 TIGD5Q53EQ6 642 aa22.11■■□□□ 1.13
TMEM53-205ENST00000372244 NOMO2Q5JPE7 1267 aa22.11■■□□□ 1.13
TMEM53-205ENST00000372244 USP49Q70CQ1 688 aa22.11■■□□□ 1.13
TMEM53-205ENST00000372244 DEPTORQ8TB45 409 aa22.11■■□□□ 1.13
TMEM53-205ENST00000372244 EPSTI1Q96J88 318 aa22.11■■□□□ 1.13
TMEM53-205ENST00000372244 DRC1Q96MC2 740 aa22.11■■□□□ 1.13
TMEM53-205ENST00000372244 RNF39Q9H2S5 420 aa22.11■■□□□ 1.13
TMEM53-205ENST00000372244 UBN1Q9NPG3 1134 aa22.11■■□□□ 1.13
TMEM53-205ENST00000372244 BLOC1S4Q9NUP1 217 aa22.11■■□□□ 1.13
TMEM53-205ENST00000372244 THEGQ9P2T0 379 aa22.11■■□□□ 1.13
TMEM53-205ENST00000372244 COG5Q9UP83 839 aa22.11■■□□□ 1.13
TMEM53-205ENST00000372244 CNTNAP2Q9UHC6 1331 aa22.11■■□□□ 1.13
TMEM53-205ENST00000372244 TTC28Q96AY4 2481 aa22.1■■□□□ 1.13
TMEM53-205ENST00000372244 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.1■■□□□ 1.13
TMEM53-205ENST00000372244 INPPL1O15357 1258 aa22.1■■□□□ 1.13
TMEM53-205ENST00000372244 ZSCAN22P10073 491 aaPredicted RBP22.1■■□□□ 1.13
TMEM53-205ENST00000372244 AFF1P51825 1210 aaKnown RBP22.1■■□□□ 1.13
TMEM53-205ENST00000372244 PLCB3Q01970 1234 aa22.1■■□□□ 1.13
TMEM53-205ENST00000372244 UBE3AQ05086 875 aa22.1■■□□□ 1.13
TMEM53-205ENST00000372244 COL19A1Q14993 1142 aa22.1■■□□□ 1.13
TMEM53-205ENST00000372244 SKIV2LQ15477 1246 aaKnown RBP22.1■■□□□ 1.13
TMEM53-205ENST00000372244 SLC27A1Q6PCB7 646 aa22.1■■□□□ 1.13
TMEM53-205ENST00000372244 POF1BQ8WVV4 589 aa22.1■■□□□ 1.13
TMEM53-205ENST00000372244 CLIC6Q96NY7 704 aa22.1■■□□□ 1.13
TMEM53-205ENST00000372244 NSUN3Q9H649 340 aaKnown RBP22.1■■□□□ 1.13
TMEM53-205ENST00000372244 TBC1D13Q9NVG8 400 aa22.1■■□□□ 1.13
TMEM53-205ENST00000372244 CUL9Q8IWT3 2517 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 SSBP05455 408 aaKnown RBP eCLIP22.09■■□□□ 1.13
TMEM53-205ENST00000372244 PEX3P56589 373 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 KARSQ15046 597 aaKnown RBP22.09■■□□□ 1.13
TMEM53-205ENST00000372244 TCEAL5Q5H9L2 206 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 SPECC1Q5M775 1068 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 LINC00301Q8NCQ3 95 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 HLA-CQ95604 372 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 ZNF558Q96NG5 402 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 KIFC3Q9BVG8 833 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 RSAD1Q9HA92 442 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 DAXXQ9UER7 740 aaPredicted RBP22.09■■□□□ 1.13
TMEM53-205ENST00000372244 LZTS1Q9Y250 596 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 RBM19Q9Y4C8 960 aaKnown RBP22.09■■□□□ 1.13
TMEM53-205ENST00000372244 HES2Q9Y543 173 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 SFI1A8K8P3 1242 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 EDN1P05305 212 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 PRKCBP05771 671 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 ITGA4P13612 1032 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 PLCG1P19174 1290 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 DDIT3P35638 169 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 MRPS5P82675 430 aaKnown RBP22.09■■□□□ 1.13
TMEM53-205ENST00000372244 PRPF4BQ13523 1007 aaKnown RBP22.09■■□□□ 1.13
TMEM53-205ENST00000372244 CDR2LQ86X02 465 aaPredicted RBP22.09■■□□□ 1.13
TMEM53-205ENST00000372244 THNSL1Q8IYQ7 743 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 SPRYD3Q8NCJ5 442 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 SPIRE2Q8WWL2 714 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 ASB2Q96Q27 587 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 TMEM134Q9H6X4 195 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 ARHGAP28Q9P2N2 729 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 KANSL3Q9P2N6 904 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 KCNG1Q9UIX4 513 aa22.09■■□□□ 1.13
TMEM53-205ENST00000372244 CCDC169A6NNP5 214 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms