RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 XPO4Q9C0E2 1151 aaKnown RBP11.46□□□□□ -0.57
COL5A1-202ENST00000371820 RC3H2Q9HBD1 1191 aaKnown RBP11.46□□□□□ -0.57
COL5A1-202ENST00000371820 C11orf16Q9NQ32 467 aa11.46□□□□□ -0.57
COL5A1-202ENST00000371820 GJB4Q9NTQ9 266 aa11.46□□□□□ -0.57
COL5A1-202ENST00000371820 SRPRBQ9Y5M8 271 aaKnown RBP11.46□□□□□ -0.57
COL5A1-202ENST00000371820 WDR81Q562E7 1941 aa11.46□□□□□ -0.58
COL5A1-202ENST00000371820 DENND3A2RUS2 1198 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 C5orf67F2Z3F1 127 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 STX10O60499 249 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 VTNP04004 478 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 RB1P06400 928 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 P4HBP07237 508 aaKnown RBP11.45□□□□□ -0.58
COL5A1-202ENST00000371820 IL9P15248 144 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 CDK11BP21127 795 aaKnown RBP11.45□□□□□ -0.58
COL5A1-202ENST00000371820 CLCN3P51790 818 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 FOSBP53539 338 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 NR5A1Q13285 461 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 BTG3Q14201 252 aaPredicted RBP11.45□□□□□ -0.58
COL5A1-202ENST00000371820 BMS1Q14692 1282 aaKnown RBP11.45□□□□□ -0.58
COL5A1-202ENST00000371820 EPHA7Q15375 998 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 UGCGQ16739 394 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 MTERF2Q49AM1 385 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 FILIP1LQ4L180 1135 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 TCEAL5Q5H9L2 206 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 TMEM31Q5JXX7 168 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 FAM178BQ8IXR5 827 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 CMTR2Q8IYT2 770 aaKnown RBP11.45□□□□□ -0.58
COL5A1-202ENST00000371820 C17orf53Q8N3J3 647 aaPredicted RBP11.45□□□□□ -0.58
COL5A1-202ENST00000371820 SMARCE1Q969G3 411 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 GJA10Q969M2 543 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 OSMRQ99650 979 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 NAA15Q9BXJ9 866 aaKnown RBP11.45□□□□□ -0.58
COL5A1-202ENST00000371820 ZMYND15Q9H091 742 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 NSUN3Q9H649 340 aaKnown RBP11.45□□□□□ -0.58
COL5A1-202ENST00000371820 ERVK-5Q9HDB9 667 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 VAV3Q9UKW4 847 aa11.45□□□□□ -0.58
COL5A1-202ENST00000371820 NOC2LQ9Y3T9 749 aaKnown RBP11.45□□□□□ -0.58
COL5A1-202ENST00000371820 GRXCR2A6NFK2 248 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 BTBD18B2RXH4 712 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 GAS2O43903 313 aaKnown RBP11.44□□□□□ -0.58
COL5A1-202ENST00000371820 GPR37L1O60883 481 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 DGKIO75912 1065 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 ZSCAN20P17040 1043 aaPredicted RBP11.44□□□□□ -0.58
COL5A1-202ENST00000371820 EIF4BP23588 611 aaKnown RBP11.44□□□□□ -0.58
COL5A1-202ENST00000371820 CTNNB1P35222 781 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 SARSP49591 514 aaKnown RBP11.44□□□□□ -0.58
COL5A1-202ENST00000371820 NLRP11P59045 1033 aaKnown RBP11.44□□□□□ -0.58
COL5A1-202ENST00000371820 ETF1P62495 437 aaKnown RBP11.44□□□□□ -0.58
COL5A1-202ENST00000371820 ORC2Q13416 577 aaPredicted RBP11.44□□□□□ -0.58
COL5A1-202ENST00000371820 NCAPHQ15003 741 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 TARBP2Q15633 366 aaKnown RBP11.44□□□□□ -0.58
COL5A1-202ENST00000371820 CALCRLQ16602 461 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 KIZQ2M2Z5 673 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 TMEM266Q2M3C6 531 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 PUS10Q3MIT2 529 aaKnown RBP11.44□□□□□ -0.58
COL5A1-202ENST00000371820 DPCR1Q3MIW9 517 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 TAF3Q5VWG9 929 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 PTCRAQ6ISU1 281 aaPredicted RBP11.44□□□□□ -0.58
COL5A1-202ENST00000371820 OTUD6AQ7L8S5 288 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 POTEDQ86YR6 584 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 C4orf19Q8IY42 314 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 GJD3Q8N144 294 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 LRRC71Q8N4P6 559 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 LINC01465Q8N7H1 131 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 ZNF592Q92610 1267 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 TNFRSF25Q93038 417 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 PABPC5Q96DU9 382 aaKnown RBP11.44□□□□□ -0.58
COL5A1-202ENST00000371820 FAM122AQ96E09 287 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 C11orf84Q9BUA3 381 aaPredicted RBP11.44□□□□□ -0.58
COL5A1-202ENST00000371820 INO80BQ9C086 356 aaPredicted RBP11.44□□□□□ -0.58
COL5A1-202ENST00000371820 LMAN2LQ9H0V9 348 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 L2HGDHQ9H9P8 463 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 PCDHA12Q9UN75 941 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 ST3GAL5Q9UNP4 418 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 PCDHB7Q9Y5E2 793 aa11.44□□□□□ -0.58
COL5A1-202ENST00000371820 TTC3P53804 2025 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 LOXHD1Q8IVV2 1947 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 PI4K2BG5E9Z4 385 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 H3BQ06 376 aaPredicted RBP11.43□□□□□ -0.58
COL5A1-202ENST00000371820 HOXA2O43364 376 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 GPR32O75388 356 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 MAFO75444 373 aaPredicted RBP11.43□□□□□ -0.58
COL5A1-202ENST00000371820 TUBBP07437 444 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 BMPR1AP36894 532 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 RFC5P40937 340 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 TRAPPC10P48553 1259 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 GPC3P51654 580 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 NCBP1Q09161 790 aaKnown RBP11.43□□□□□ -0.58
COL5A1-202ENST00000371820 NCAPH2Q6IBW4 605 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 SHC4Q6S5L8 630 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 SLC24A5Q71RS6 500 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 ZNF410Q86VK4 478 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 FAM228AQ86W67 206 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 VSTM4Q8IW00 320 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 ANKRD20A12PQ8NF67 263 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 TMEM40Q8WWA1 233 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 NLRP7Q8WX94 980 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 LINC01599Q8WXQ3 324 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 SLC7A3Q8WY07 619 aa11.43□□□□□ -0.58
COL5A1-202ENST00000371820 HAS1Q92839 578 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms