RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 DKC1O60832 514 aaKnown RBP eCLIP17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 ITGA4P13612 1032 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 TMC3Q7Z5M5 1100 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 RASSF3Q86WH2 238 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 SUPT20HQ8NEM7 779 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 AGPAT1Q99943 283 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 DUSP9Q99956 384 aaKnown RBP17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 SMG5Q9UPR3 1016 aaKnown RBP17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 SLC4A7Q9Y6M7 1214 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 ARHGEF28Q8N1W1 1705 aaKnown RBP17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 TMEM253P0C7T8 217 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 POLR2MP0CAP2 368 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 ARL4CP56559 192 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 EDRF1Q3B7T1 1238 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 APLFQ8IW19 511 aaPredicted RBP17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 ZBED8Q8IZ13 594 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 PIGBQ92521 554 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 LRGUKQ96M69 825 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 STK33Q9BYT3 514 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 ALG13Q9NP73 1137 aaKnown RBP17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 USP17L15C9J2P7 530 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 USP17L13C9JLJ4 530 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 USP17L11C9JVI0 530 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 USP17L18D6R9N7 530 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 USP17L22D6RA61 530 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 USP17L17D6RBQ6 530 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 USP17L19D6RCP7 530 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 USP17L20D6RJB6 530 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 NCF2P19878 526 aaPredicted RBP17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 POLR2BP30876 1174 aaKnown RBP17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 LIG4P49917 911 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 USP17L24Q0WX57 530 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 KRT80Q6KB66 452 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 USP17L6PQ6QN14 398 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 WDR75Q8IWA0 830 aaKnown RBP17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 CPXCR1Q8N123 301 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 HAO1Q9UJM8 370 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 CCNL1Q9UK58 526 aaPredicted RBP17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 GOLGA8IPA6NC78 632 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 GOLGA8JA6NMD2 632 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 TNFRSF8P28908 595 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 UBXN2AP68543 259 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 RFX6Q8HWS3 928 aa17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 RNF25Q96BH1 459 aaPredicted RBP17.04■□□□□ 0.32
CLSTN1-201ENST00000361311 O00370 1275 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 HNRNPDLO14979 420 aaKnown RBP17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 CLDN3O15551 220 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 HNRNPCP07910 306 aaKnown RBP eCLIP17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 UBTFL6P0CB48 400 aaPredicted RBP17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 MYBL1P10243 752 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 PKN1Q16512 942 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 ATL2Q8NHH9 583 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 SH3RF3Q8TEJ3 882 aaPredicted RBP17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 SERPINB12Q96P63 405 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 MCM8Q9UJA3 840 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 PIK3C2BO00750 1634 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 STAT3P40763 770 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 CRKLP46109 303 aaKnown RBP17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 ALDH5A1P51649 535 aaPredicted RBP17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 ICA1Q05084 483 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 ASPHQ12797 758 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 KRT81Q14533 505 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 IQCKQ8N0W5 287 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 AFAP1L2Q8N4X5 818 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 MREGQ8N565 214 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 FAM81BQ96LP2 452 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 UBXN6Q9BZV1 441 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 KRT37O76014 449 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 TJP3O95049 919 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 PIK3CAP42336 1068 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 KCNMA1Q12791 1236 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 PDIA2Q13087 525 aaKnown RBP17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 BTNL9Q6UXG8 535 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 RBM15Q96T37 977 aaKnown RBP eCLIP17.03■□□□□ 0.324e-6■■□□□ 13.2
CLSTN1-201ENST00000361311 ANKFY1Q9P2R3 1169 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 PJA2O43164 708 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 GPS1Q13098 491 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 DMP1Q13316 513 aaPredicted RBP17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 ANKRD20A4Q4UJ75 823 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 ANKRD20A2Q5SQ80 823 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 ANKRD20A1Q5TYW2 823 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 SCYL2Q6P3W7 929 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 KIAA0825Q8IV33 1275 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 AGAP11Q8TF27 550 aa17.03■□□□□ 0.32
CLSTN1-201ENST00000361311 ZNF662Q6ZS27 426 aa17.02■□□□□ 0.32
CLSTN1-201ENST00000361311 SLC26A7Q8TE54 656 aa17.02■□□□□ 0.32
CLSTN1-201ENST00000361311 CDKL2Q92772 493 aa17.02■□□□□ 0.32
CLSTN1-201ENST00000361311 WDR11Q9BZH6 1224 aa17.02■□□□□ 0.32
CLSTN1-201ENST00000361311 SERPINB13Q9UIV8 391 aa17.02■□□□□ 0.32
CLSTN1-201ENST00000361311 AGPSO00116 658 aa17.02■□□□□ 0.32
CLSTN1-201ENST00000361311 MCF2LO15068 1137 aa17.02■□□□□ 0.32
CLSTN1-201ENST00000361311 MED21Q13503 144 aa17.02■□□□□ 0.32
CLSTN1-201ENST00000361311 KLHL38Q2WGJ6 581 aa17.02■□□□□ 0.32
CLSTN1-201ENST00000361311 CERKLQ49MI3 558 aaPredicted RBP17.02■□□□□ 0.32
CLSTN1-201ENST00000361311 ERFEQ4G0M1 354 aa17.02■□□□□ 0.32
CLSTN1-201ENST00000361311 DNAJC24Q6P3W2 148 aa17.02■□□□□ 0.32
CLSTN1-201ENST00000361311 ZNF507Q8TCN5 953 aa17.02■□□□□ 0.32
CLSTN1-201ENST00000361311 PPWD1Q96BP3 646 aaKnown RBP17.02■□□□□ 0.32
CLSTN1-201ENST00000361311 CEP95Q96GE4 821 aa17.02■□□□□ 0.32
CLSTN1-201ENST00000361311 A1CFQ9NQ94 594 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms