RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 BRDTQ58F21 947 aaPredicted RBP19.85■□□□□ 0.77
PDLIM7-203ENST00000359895 BEND6Q5SZJ8 279 aaPredicted RBP19.85■□□□□ 0.77
PDLIM7-203ENST00000359895 C1orf220Q5T0J3 134 aa19.85■□□□□ 0.77
PDLIM7-203ENST00000359895 PHLDB3Q6NSJ2 640 aa19.85■□□□□ 0.77
PDLIM7-203ENST00000359895 COG1Q8WTW3 980 aa19.85■□□□□ 0.77
PDLIM7-203ENST00000359895 KCNN1Q92952 543 aa19.85■□□□□ 0.77
PDLIM7-203ENST00000359895 FUT8Q9BYC5 575 aa19.85■□□□□ 0.77
PDLIM7-203ENST00000359895 GPR88Q9GZN0 384 aa19.85■□□□□ 0.77
PDLIM7-203ENST00000359895 ELP3Q9H9T3 547 aa19.85■□□□□ 0.77
PDLIM7-203ENST00000359895 XPNPEP1Q9NQW7 623 aa19.85■□□□□ 0.77
PDLIM7-203ENST00000359895 SPDYE5A6NIY4 337 aa19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 CES2O00748 559 aa19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 NCK2O43639 380 aa19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 GTF2H1P32780 548 aa19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 GCLMP48507 274 aa19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 SP2Q02086 613 aa19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 MAP9Q49MG5 647 aa19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 CFAP221Q4G0U5 840 aa19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 USP50Q70EL3 339 aaPredicted RBP19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 CYFIP1Q7L576 1253 aa19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 HDXQ7Z353 690 aa19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 NCAPG2Q86XI2 1143 aa19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 MSL3Q8N5Y2 521 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 U2AF1L4Q8WU68 220 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 ZC3H15Q8WU90 426 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 CNKSR2Q8WXI2 1034 aa19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 FBXL18Q96ME1 805 aa19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 POLR3FQ9H1D9 316 aaPredicted RBP19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 SYNGAP1Q96PV0 1343 aa19.84■□□□□ 0.77
PDLIM7-203ENST00000359895 GRID2IPA4D2P6 1211 aa19.83■□□□□ 0.77
PDLIM7-203ENST00000359895 OATP04181 439 aa19.83■□□□□ 0.77
PDLIM7-203ENST00000359895 ADRB2P07550 413 aa19.83■□□□□ 0.77
PDLIM7-203ENST00000359895 TGFB3P10600 412 aa19.83■□□□□ 0.77
PDLIM7-203ENST00000359895 ADSSP30520 456 aa19.83■□□□□ 0.77
PDLIM7-203ENST00000359895 POLGP54098 1239 aaPredicted RBP19.83■□□□□ 0.77
PDLIM7-203ENST00000359895 PPIL2Q13356 520 aa19.83■□□□□ 0.77
PDLIM7-203ENST00000359895 NEDD9Q14511 834 aa19.83■□□□□ 0.77
PDLIM7-203ENST00000359895 MTERF2Q49AM1 385 aa19.83■□□□□ 0.77
PDLIM7-203ENST00000359895 SEPT14Q6ZU15 432 aa19.83■□□□□ 0.77
PDLIM7-203ENST00000359895 OTUD5Q96G74 571 aa19.83■□□□□ 0.77
PDLIM7-203ENST00000359895 MFSD14AQ96MC6 490 aa19.83■□□□□ 0.77
PDLIM7-203ENST00000359895 SYT11Q9BT88 431 aa19.83■□□□□ 0.77
PDLIM7-203ENST00000359895 TMEM117Q9H0C3 514 aa19.83■□□□□ 0.77
PDLIM7-203ENST00000359895 ABCB6Q9NP58 842 aa19.83■□□□□ 0.77
PDLIM7-203ENST00000359895 UBE2TQ9NPD8 197 aaPredicted RBP19.83■□□□□ 0.77
PDLIM7-203ENST00000359895 ARHGAP28Q9P2N2 729 aa19.83■□□□□ 0.77
PDLIM7-203ENST00000359895 AGTPBP1Q9UPW5 1226 aa19.83■□□□□ 0.77
PDLIM7-203ENST00000359895 KCNH4Q9UQ05 1017 aa19.83■□□□□ 0.77
PDLIM7-203ENST00000359895 IGKV6D-21A0A0A0MT36 114 aa19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 GOLGA8IPA6NC78 632 aa19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 GOLGA8JA6NMD2 632 aa19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 KIAA0391O15091 583 aaKnown RBP19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 TNFAIP3P21580 790 aa19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 NOP2P46087 812 aaKnown RBP19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 PLA2G4AP47712 749 aa19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 GABPB1Q06547 395 aaPredicted RBP19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 C2orf54Q08AI8 447 aa19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 EMC2Q15006 297 aa19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 ARHGAP44Q17R89 818 aa19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 DLK2Q6UY11 383 aa19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 SYCE1Q8N0S2 351 aa19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 SPATA4Q8NEY3 305 aa19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 LNX1Q8TBB1 728 aaPredicted RBP19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 PLEKHO2Q8TD55 490 aa19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 POMGNT1Q8WZA1 660 aa19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 TAF4BQ92750 862 aa19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 CDCA5Q96FF9 252 aa19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 KIFC3Q9BVG8 833 aa19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 NIFKQ9BYG3 293 aaKnown RBP19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 KIAA1586Q9HCI6 787 aa19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 TMEM8AQ9HCN3 771 aa19.83■□□□□ 0.76
PDLIM7-203ENST00000359895 SOWAHBA6NEL2 793 aa19.82■□□□□ 0.76
PDLIM7-203ENST00000359895 NCANO14594 1321 aa19.82■□□□□ 0.76
PDLIM7-203ENST00000359895 MAP2K7O14733 419 aa19.82■□□□□ 0.76
PDLIM7-203ENST00000359895 FAM160B1Q5W0V3 765 aa19.82■□□□□ 0.76
PDLIM7-203ENST00000359895 KRT39Q6A163 491 aa19.82■□□□□ 0.76
PDLIM7-203ENST00000359895 DPY19L2Q6NUT2 758 aa19.82■□□□□ 0.76
PDLIM7-203ENST00000359895 CBWD2Q8IUF1 395 aa19.82■□□□□ 0.76
PDLIM7-203ENST00000359895 GPD1LQ8N335 351 aa19.82■□□□□ 0.76
PDLIM7-203ENST00000359895 PARD3BQ8TEW8 1205 aa19.82■□□□□ 0.76
PDLIM7-203ENST00000359895 ASCC2Q9H1I8 757 aaPredicted RBP19.82■□□□□ 0.76
PDLIM7-203ENST00000359895 ZNFX1Q9P2E3 1918 aaKnown RBP19.82■□□□□ 0.76
PDLIM7-203ENST00000359895 L1RE1Q9UN81 338 aa19.82■□□□□ 0.76
PDLIM7-203ENST00000359895 COQ4Q9Y3A0 265 aa19.82■□□□□ 0.76
PDLIM7-203ENST00000359895 TELO2Q9Y4R8 837 aa19.82■□□□□ 0.76
PDLIM7-203ENST00000359895 PPME1Q9Y570 386 aa19.82■□□□□ 0.76
PDLIM7-203ENST00000359895 FOXN3O00409 490 aaPredicted RBP19.81■□□□□ 0.76
PDLIM7-203ENST00000359895 HNRNPDLO14979 420 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-203ENST00000359895 SASH3O75995 380 aa19.81■□□□□ 0.76
PDLIM7-203ENST00000359895 FTCDO95954 541 aa19.81■□□□□ 0.76
PDLIM7-203ENST00000359895 TMEM253P0C7T8 217 aa19.81■□□□□ 0.76
PDLIM7-203ENST00000359895 UBA1P22314 1058 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-203ENST00000359895 RFC5P40937 340 aa19.81■□□□□ 0.76
PDLIM7-203ENST00000359895 SOX10P56693 466 aa19.81■□□□□ 0.76
PDLIM7-203ENST00000359895 RPS6KA1Q15418 735 aa19.81■□□□□ 0.76
PDLIM7-203ENST00000359895 SLC39A4Q6P5W5 647 aa19.81■□□□□ 0.76
PDLIM7-203ENST00000359895 KCNV1Q6PIU1 500 aa19.81■□□□□ 0.76
PDLIM7-203ENST00000359895 ZSWIM2Q8NEG5 633 aa19.81■□□□□ 0.76
PDLIM7-203ENST00000359895 TPCN2Q8NHX9 752 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms