RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 NOC2LQ9Y3T9 749 aaKnown RBP17.14■□□□□ 0.33
NPHP3-201ENST00000337331 FRMPD1Q5SYB0 1578 aa17.14■□□□□ 0.33
NPHP3-201ENST00000337331 NOL3O60936 208 aaKnown RBP17.14■□□□□ 0.33
NPHP3-201ENST00000337331 IQCKQ8N0W5 287 aa17.14■□□□□ 0.33
NPHP3-201ENST00000337331 IGDCC4Q8TDY8 1250 aa17.14■□□□□ 0.33
NPHP3-201ENST00000337331 CEP72Q9P209 647 aa17.14■□□□□ 0.33
NPHP3-201ENST00000337331 A0A0G2JND7 137 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 CFAP69A5D8W1 941 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 FAM196BA6NMK8 535 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 CASQ2O14958 399 aaPredicted RBP17.13■□□□□ 0.33
NPHP3-201ENST00000337331 INHBAP08476 426 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 HOXA7P31268 230 aaPredicted RBP17.13■□□□□ 0.33
NPHP3-201ENST00000337331 GRAMD1BQ3KR37 738 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 TRIM50Q86XT4 487 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 CD209Q9NNX6 404 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 DNAJC12Q9UKB3 198 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 BCS1LQ9Y276 419 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 POTEB3A0JP26 581 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 POTECB2RU33 542 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 INO80B-WBP1J3KQ70 363 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 POTEBQ6S5H4 581 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 PROM2Q8N271 834 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 SRBD1Q8N5C6 995 aaKnown RBP17.13■□□□□ 0.33
NPHP3-201ENST00000337331 DRAXINQ8NBI3 349 aaPredicted RBP17.13■□□□□ 0.33
NPHP3-201ENST00000337331 PPP4R1Q8TF05 950 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 NDNQ99608 321 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 INO80BQ9C086 356 aaPredicted RBP17.13■□□□□ 0.33
NPHP3-201ENST00000337331 PDP2Q9P2J9 529 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 QRICH2Q9H0J4 1663 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 AGLP35573 1532 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 ZBTB5O15062 677 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 ZFXP17010 805 aaPredicted RBP17.13■□□□□ 0.33
NPHP3-201ENST00000337331 EIF2AK2P19525 551 aaKnown RBP17.13■□□□□ 0.33
NPHP3-201ENST00000337331 IGBP1P78318 339 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 RCN1Q15293 331 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 TRIM11Q96F44 468 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 FAM84BQ96KN1 310 aaPredicted RBP17.13■□□□□ 0.33
NPHP3-201ENST00000337331 BARHL2Q9NY43 387 aa17.13■□□□□ 0.33
NPHP3-201ENST00000337331 CAPN9O14815 690 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 RAD17O75943 681 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 GH2P01242 217 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 FCER1AP12319 257 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 MIGA2Q7L4E1 593 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 TSC22D4Q9Y3Q8 395 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 RPS6KA4O75676 772 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 NCAPG2Q86XI2 1143 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 GUF1Q8N442 669 aaKnown RBP17.12■□□□□ 0.33
NPHP3-201ENST00000337331 AFAP1L2Q8N4X5 818 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 RNF225M0QZC1 329 aaPredicted RBP17.12■□□□□ 0.33
NPHP3-201ENST00000337331 TDP2O95551 362 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 ANTXR2P58335 489 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 DYNLT1P63172 113 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 FAM161BQ96MY7 647 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 SIKE1Q9BRV8 207 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 PFDN4Q9NQP4 134 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 TRIM33Q9UPN9 1127 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 CDC42BPGQ6DT37 1551 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 UBE2Q2LH0YL09 131 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 KRT16P08779 473 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 TFAMQ00059 246 aaKnown RBP17.12■□□□□ 0.33
NPHP3-201ENST00000337331 DPYDQ12882 1025 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 COASYQ13057 564 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 ZBTB17Q13105 803 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 SLC29A2Q14542 456 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 CDKAL1Q5VV42 579 aa17.12■□□□□ 0.33
NPHP3-201ENST00000337331 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.12■□□□□ 0.33
NPHP3-201ENST00000337331 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.12■□□□□ 0.334e-6■□□□□ 9.4
NPHP3-201ENST00000337331 PNPLA7Q6ZV29 1317 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 PYGBP11216 843 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 CA4P22748 312 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 HSPA9P38646 679 aaKnown RBP17.11■□□□□ 0.33
NPHP3-201ENST00000337331 GRM4Q14833 912 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 TRADDQ15628 312 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 USP38Q8NB14 1042 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 SPZ1Q9BXG8 430 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 COA1Q9GZY4 146 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 MRPL47Q9HD33 250 aaKnown RBP17.11■□□□□ 0.33
NPHP3-201ENST00000337331 NXF1Q9UBU9 619 aaKnown RBP17.11■□□□□ 0.33
NPHP3-201ENST00000337331 TMEM120BA0PK00 339 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 USP17L10C9JJH3 530 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 NR3C1P04150 777 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 PEX3P56589 373 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 ZNF211Q13398 564 aaPredicted RBP17.11■□□□□ 0.33
NPHP3-201ENST00000337331 RHOT2Q8IXI1 618 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 RAD54LQ92698 747 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 RIOK1Q9BRS2 568 aaKnown RBP17.11■□□□□ 0.33
NPHP3-201ENST00000337331 RCCD1A6NED2 376 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 SRGNP10124 158 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 CALB2P22676 271 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 GALNT15Q8N3T1 639 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 MXD3Q9BW11 206 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 SENP2Q9HC62 589 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 PCDHA6Q9UN73 950 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 PCDHA8Q9Y5H6 950 aa17.11■□□□□ 0.33
NPHP3-201ENST00000337331 SPDYE5A6NIY4 337 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 AGTP01019 485 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 DRD4P21917 467 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 CYLC2Q14093 348 aaPredicted RBP17.1■□□□□ 0.33
NPHP3-201ENST00000337331 MTERF2Q49AM1 385 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 ZCWPW2Q504Y3 356 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms