RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 NUDCD1Q96RS6 583 aa17.46■□□□□ 0.39
CCDC8-201ENST00000307522 SRRM3A6NNA2 597 aaPredicted RBP17.45■□□□□ 0.38
CCDC8-201ENST00000307522 ASAP2O43150 1006 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 LCA5LO95447 670 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 ECEL1O95672 775 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 GSTA1P08263 222 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 GNA11P29992 359 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 MTMR3Q13615 1198 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 RNF10Q8N5U6 811 aaKnown RBP17.45■□□□□ 0.38
CCDC8-201ENST00000307522 SCFD2Q8WU76 684 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 ZDHHC15Q96MV8 337 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 CNOT10Q9H9A5 744 aaKnown RBP17.45■□□□□ 0.38
CCDC8-201ENST00000307522 PTPN22Q9Y2R2 807 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 SCN9AQ15858 1988 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 M0R2N6 131 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 NDUFB10O96000 172 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 ALADP13716 330 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 ABCB4P21439 1286 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 HNRNPH3P31942 346 aaKnown RBP17.45■□□□□ 0.38
CCDC8-201ENST00000307522 PTK2Q05397 1052 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 ITIH4Q14624 930 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 DLGAP5Q15398 846 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 ECM1Q16610 540 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 TBC1D10BQ4KMP7 808 aaPredicted RBP17.45■□□□□ 0.38
CCDC8-201ENST00000307522 SAMD7Q7Z3H4 446 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 OGFOD1Q8N543 542 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 FBF1Q8TES7 1133 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 CDK5RAP3Q96JB5 506 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 SH2D3AQ9BRG2 576 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 SPZ1Q9BXG8 430 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 KBTBD4Q9NVX7 518 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 RGL1Q9NZL6 768 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 LNPEPQ9UIQ6 1025 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 MYH4Q9Y623 1939 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 SMCHD1A6NHR9 2005 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 TRAF5O00463 557 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 EDIL3O43854 480 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 SORBS3O60504 671 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 NOL4O94818 638 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 ACSL3O95573 720 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 CFBP00751 764 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 LONP1P36776 959 aaKnown RBP17.45■□□□□ 0.38
CCDC8-201ENST00000307522 PMS2P54278 862 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 MGAT5Q09328 741 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 MAN2A1Q16706 1144 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 PRR16Q569H4 304 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 FOXB2Q5VYV0 432 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 ARHGAP22Q7Z5H3 698 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 CPXCR1Q8N123 301 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 BMP2KQ9NSY1 1161 aaPredicted RBP17.45■□□□□ 0.38
CCDC8-201ENST00000307522 TMEM59LQ9UK28 342 aa17.45■□□□□ 0.38
CCDC8-201ENST00000307522 SP100P23497 879 aaPredicted RBP17.44■□□□□ 0.38
CCDC8-201ENST00000307522 MMP13P45452 471 aa17.44■□□□□ 0.38
CCDC8-201ENST00000307522 MUM1Q2TAK8 710 aa17.44■□□□□ 0.38
CCDC8-201ENST00000307522 HHIPL2Q6UWX4 724 aa17.44■□□□□ 0.38
CCDC8-201ENST00000307522 C1orf131Q8NDD1 294 aaKnown RBP17.44■□□□□ 0.38
CCDC8-201ENST00000307522 FLAD1Q8NFF5 587 aa17.44■□□□□ 0.38
CCDC8-201ENST00000307522 ATP8B4Q8TF62 1192 aa17.44■□□□□ 0.38
CCDC8-201ENST00000307522 GORASP1Q9BQQ3 440 aa17.44■□□□□ 0.38
CCDC8-201ENST00000307522 RAB17Q9H0T7 212 aa17.44■□□□□ 0.38
CCDC8-201ENST00000307522 OSGEPQ9NPF4 335 aa17.44■□□□□ 0.38
CCDC8-201ENST00000307522 RNF14Q9UBS8 474 aa17.44■□□□□ 0.38
CCDC8-201ENST00000307522 USH1CQ9Y6N9 552 aa17.44■□□□□ 0.38
CCDC8-201ENST00000307522 ROBO3Q96MS0 1386 aa17.44■□□□□ 0.38
CCDC8-201ENST00000307522 PPFIA2O75334 1257 aa17.44■□□□□ 0.38
CCDC8-201ENST00000307522 LUC7L3O95232 432 aaKnown RBP17.44■□□□□ 0.38
CCDC8-201ENST00000307522 R3HDM1Q15032 1099 aaKnown RBP17.44■□□□□ 0.38
CCDC8-201ENST00000307522 IFI16Q16666 785 aaKnown RBP17.44■□□□□ 0.38
CCDC8-201ENST00000307522 SPATA21Q7Z572 469 aa17.44■□□□□ 0.38
CCDC8-201ENST00000307522 MFN1Q8IWA4 741 aa17.44■□□□□ 0.38
CCDC8-201ENST00000307522 SNX29Q8TEQ0 813 aa17.44■□□□□ 0.38
CCDC8-201ENST00000307522 PBKQ96KB5 322 aa17.44■□□□□ 0.38
CCDC8-201ENST00000307522 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.44■□□□□ 0.38
CCDC8-201ENST00000307522 KIAA1551Q9HCM1 1747 aa17.44■□□□□ 0.38
CCDC8-201ENST00000307522 GOLGA6L10A0A0M3HER8 536 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 PDCD2Q16342 344 aaPredicted RBP17.43■□□□□ 0.38
CCDC8-201ENST00000307522 LMNTD2Q8IXW0 634 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 NEK9Q8TD19 979 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 DTX3LQ8TDB6 740 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 FGFBP2Q9BYJ0 223 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 TMOD4Q9NZQ9 345 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 ANKRD31Q8N7Z5 1873 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 EPHB2P29323 1055 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 BNIP1Q12981 228 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 SLC18A3Q16572 532 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 HOOK3Q86VS8 718 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 GALNT15Q8N3T1 639 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 DDX60LQ5H9U9 1706 aaKnown RBP17.43■□□□□ 0.38
CCDC8-201ENST00000307522 DDX39AO00148 427 aaKnown RBP17.43■□□□□ 0.38
CCDC8-201ENST00000307522 UBTFL6P0CB48 400 aaPredicted RBP17.43■□□□□ 0.38
CCDC8-201ENST00000307522 ZCCHC18P0CG32 403 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 PTDSS1P48651 473 aaKnown RBP17.43■□□□□ 0.38
CCDC8-201ENST00000307522 PLS1Q14651 629 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 CNGA2Q16280 664 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 HHATQ5VTY9 493 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 VSIG1Q86XK7 387 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 ANKLE1Q8NAG6 615 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 C7orf43Q8WVR3 580 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 SPOCK2Q92563 424 aa17.43■□□□□ 0.38
CCDC8-201ENST00000307522 RIOX1Q9H6W3 641 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms