RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 ERAP1Q9NZ08 941 aa20.61■□□□□ 0.89
VBP1-201ENST00000286428 APEX2Q9UBZ4 518 aa20.61■□□□□ 0.89
VBP1-201ENST00000286428 LRRIQ4A6NIV6 560 aa20.61■□□□□ 0.89
VBP1-201ENST00000286428 ZNF233A6NK53 670 aa20.61■□□□□ 0.89
VBP1-201ENST00000286428 PIGRP01833 764 aa20.61■□□□□ 0.89
VBP1-201ENST00000286428 ADSSP30520 456 aa20.61■□□□□ 0.89
VBP1-201ENST00000286428 IRF5Q13568 498 aa20.61■□□□□ 0.89
VBP1-201ENST00000286428 CBWD6Q4V339 395 aa20.61■□□□□ 0.89
VBP1-201ENST00000286428 CBWD3Q5JTY5 395 aa20.61■□□□□ 0.89
VBP1-201ENST00000286428 CBWD5Q5RIA9 395 aa20.61■□□□□ 0.89
VBP1-201ENST00000286428 FAM81BQ96LP2 452 aa20.61■□□□□ 0.89
VBP1-201ENST00000286428 MFSD14AQ96MC6 490 aa20.61■□□□□ 0.89
VBP1-201ENST00000286428 C2orf40Q9H1Z8 148 aa20.61■□□□□ 0.89
VBP1-201ENST00000286428 FHOD1Q9Y613 1164 aa20.61■□□□□ 0.89
VBP1-201ENST00000286428 STYXL1Q9Y6J8 313 aa20.61■□□□□ 0.89
VBP1-201ENST00000286428 SLC15A5A6NIM6 579 aa20.6■□□□□ 0.89
VBP1-201ENST00000286428 ASAP2O43150 1006 aa20.6■□□□□ 0.89
VBP1-201ENST00000286428 PLEKP08567 350 aaPredicted RBP20.6■□□□□ 0.89
VBP1-201ENST00000286428 TRIM49P0CI25 452 aa20.6■□□□□ 0.89
VBP1-201ENST00000286428 TRIM49CP0CI26 452 aa20.6■□□□□ 0.89
VBP1-201ENST00000286428 SOX10P56693 466 aa20.6■□□□□ 0.89
VBP1-201ENST00000286428 RNF10Q8N5U6 811 aaKnown RBP20.6■□□□□ 0.89
VBP1-201ENST00000286428 TRIM58Q8NG06 486 aa20.6■□□□□ 0.89
VBP1-201ENST00000286428 PSPC1Q8WXF1 523 aaKnown RBP20.6■□□□□ 0.89
VBP1-201ENST00000286428 SECISBP2LQ93073 1101 aaKnown RBP20.6■□□□□ 0.89
VBP1-201ENST00000286428 INTS2Q9H0H0 1204 aaKnown RBP20.6■□□□□ 0.89
VBP1-201ENST00000286428 SIX2Q9NPC8 291 aa20.6■□□□□ 0.89
VBP1-201ENST00000286428 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.6■□□□□ 0.89
VBP1-201ENST00000286428 USP20Q9Y2K6 914 aa20.6■□□□□ 0.89
VBP1-201ENST00000286428 ANKRD63C9JTQ0 380 aa20.59■□□□□ 0.89
VBP1-201ENST00000286428 PJA2O43164 708 aa20.59■□□□□ 0.89
VBP1-201ENST00000286428 EXTL3O43909 919 aa20.59■□□□□ 0.89
VBP1-201ENST00000286428 ADCY3O60266 1144 aa20.59■□□□□ 0.89
VBP1-201ENST00000286428 TACC1O75410 805 aa20.59■□□□□ 0.89
VBP1-201ENST00000286428 MXI1P50539 228 aa20.59■□□□□ 0.89
VBP1-201ENST00000286428 JAM2P57087 298 aa20.59■□□□□ 0.89
VBP1-201ENST00000286428 TFDP1Q14186 410 aa20.59■□□□□ 0.89
VBP1-201ENST00000286428 CST9Q5W186 159 aa20.59■□□□□ 0.89
VBP1-201ENST00000286428 KRT39Q6A163 491 aa20.59■□□□□ 0.89
VBP1-201ENST00000286428 MTERF4Q7Z6M4 381 aaKnown RBP20.59■□□□□ 0.89
VBP1-201ENST00000286428 ZBTB8OSQ8IWT0 167 aa20.59■□□□□ 0.89
VBP1-201ENST00000286428 SLC35F6Q8N357 371 aa20.59■□□□□ 0.89
VBP1-201ENST00000286428 ALS2CR12Q96Q35 445 aa20.59■□□□□ 0.89
VBP1-201ENST00000286428 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.59■□□□□ 0.89
VBP1-201ENST00000286428 IRX2Q9BZI1 471 aaPredicted RBP20.59■□□□□ 0.89
VBP1-201ENST00000286428 ABHD16BQ9H3Z7 469 aa20.59■□□□□ 0.89
VBP1-201ENST00000286428 TMEM8AQ9HCN3 771 aa20.59■□□□□ 0.89
VBP1-201ENST00000286428 DNAJC12Q9UKB3 198 aa20.59■□□□□ 0.89
VBP1-201ENST00000286428 TLR2O60603 784 aa20.58■□□□□ 0.89
VBP1-201ENST00000286428 ITGBL1O95965 494 aaPredicted RBP20.58■□□□□ 0.89
VBP1-201ENST00000286428 ZNF157P51786 506 aaPredicted RBP20.58■□□□□ 0.89
VBP1-201ENST00000286428 CYP27A1Q02318 531 aa20.58■□□□□ 0.89
VBP1-201ENST00000286428 PLCB4Q15147 1175 aa20.58■□□□□ 0.89
VBP1-201ENST00000286428 ZNF484Q5JVG2 852 aa20.58■□□□□ 0.89
VBP1-201ENST00000286428 TAPT1Q6NXT6 567 aa20.58■□□□□ 0.89
VBP1-201ENST00000286428 IRF2BP2Q7Z5L9 587 aa20.58■□□□□ 0.89
VBP1-201ENST00000286428 PPTC7Q8NI37 304 aa20.58■□□□□ 0.89
VBP1-201ENST00000286428 PARD3BQ8TEW8 1205 aa20.58■□□□□ 0.89
VBP1-201ENST00000286428 ZNF215Q9UL58 517 aaPredicted RBP20.58■□□□□ 0.89
VBP1-201ENST00000286428 TRPC6Q9Y210 931 aa20.58■□□□□ 0.89
VBP1-201ENST00000286428 MRFAP1Q9Y605 127 aa20.58■□□□□ 0.89
VBP1-201ENST00000286428 ATP8B3O60423 1300 aa20.58■□□□□ 0.89
VBP1-201ENST00000286428 MYH9P35579 1960 aaKnown RBP20.58■□□□□ 0.89
VBP1-201ENST00000286428 IGKV6-21A0A0C4DH24 114 aa20.58■□□□□ 0.88
VBP1-201ENST00000286428 TISP43B9A030 160 aa20.58■□□□□ 0.88
VBP1-201ENST00000286428 SOX5P35711 763 aa20.58■□□□□ 0.88
VBP1-201ENST00000286428 ARID5AQ03989 594 aa20.58■□□□□ 0.88
VBP1-201ENST00000286428 GFPT1Q06210 699 aaPredicted RBP20.58■□□□□ 0.88
VBP1-201ENST00000286428 IQSEC1Q6DN90 963 aa20.58■□□□□ 0.88
VBP1-201ENST00000286428 IQCEQ6IPM2 695 aa20.58■□□□□ 0.88
VBP1-201ENST00000286428 ZPBP2Q6X784 338 aa20.58■□□□□ 0.88
VBP1-201ENST00000286428 ADGRA3Q8IWK6 1321 aa20.58■□□□□ 0.88
VBP1-201ENST00000286428 CEP112Q8N8E3 955 aa20.58■□□□□ 0.88
VBP1-201ENST00000286428 ASAP3Q8TDY4 903 aa20.58■□□□□ 0.88
VBP1-201ENST00000286428 PTPN18Q99952 460 aa20.58■□□□□ 0.88
VBP1-201ENST00000286428 LRRC37A2A6NM11 1700 aa20.57■□□□□ 0.88
VBP1-201ENST00000286428 ANO9A1A5B4 782 aa20.57■□□□□ 0.88
VBP1-201ENST00000286428 MAGEB2O15479 319 aa20.57■□□□□ 0.88
VBP1-201ENST00000286428 PPFIA4O75335 1185 aa20.57■□□□□ 0.88
VBP1-201ENST00000286428 MARK3P27448 753 aa20.57■□□□□ 0.88
VBP1-201ENST00000286428 BMS1Q14692 1282 aaKnown RBP20.57■□□□□ 0.88
VBP1-201ENST00000286428 CBWD2Q8IUF1 395 aa20.57■□□□□ 0.88
VBP1-201ENST00000286428 MAML3Q96JK9 1138 aa20.57■□□□□ 0.88
VBP1-201ENST00000286428 PDGFCQ9NRA1 345 aa20.57■□□□□ 0.88
VBP1-201ENST00000286428 CDC23Q9UJX2 597 aa20.57■□□□□ 0.88
VBP1-201ENST00000286428 ARID2Q68CP9 1835 aa20.56■□□□□ 0.88
VBP1-201ENST00000286428 GOLGA8IPA6NC78 632 aa20.56■□□□□ 0.88
VBP1-201ENST00000286428 GOLGA8JA6NMD2 632 aa20.56■□□□□ 0.88
VBP1-201ENST00000286428 EFCAB8A8MWE9 144 aa20.56■□□□□ 0.88
VBP1-201ENST00000286428 GCLMP48507 274 aa20.56■□□□□ 0.88
VBP1-201ENST00000286428 ARHGAP1Q07960 439 aa20.56■□□□□ 0.88
VBP1-201ENST00000286428 CYP24A1Q07973 514 aa20.56■□□□□ 0.88
VBP1-201ENST00000286428 EPC2Q52LR7 807 aa20.56■□□□□ 0.88
VBP1-201ENST00000286428 SLC39A4Q6P5W5 647 aa20.56■□□□□ 0.88
VBP1-201ENST00000286428 PRPF31Q8WWY3 499 aaKnown RBP20.56■□□□□ 0.88
VBP1-201ENST00000286428 SAAL1Q96ER3 474 aa20.56■□□□□ 0.88
VBP1-201ENST00000286428 FNBP1Q96RU3 617 aa20.56■□□□□ 0.88
VBP1-201ENST00000286428 MRPL4Q9BYD3 311 aaKnown RBP20.56■□□□□ 0.88
VBP1-201ENST00000286428 SUGCTQ9HAC7 445 aa20.56■□□□□ 0.88
VBP1-201ENST00000286428 ADAMTS1Q9UHI8 967 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms