RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 VIMP08670 466 aaKnown RBP18.4■□□□□ 0.54
SPG7-201ENST00000268704 XRCC4Q13426 336 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 LRRC14Q15048 493 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 VPS72Q15906 364 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 TBC1D31Q96DN5 1066 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 AGPAT1Q99943 283 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 HSD17B14Q9BPX1 270 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 POLR3CQ9BUI4 534 aaPredicted RBP18.4■□□□□ 0.54
SPG7-201ENST00000268704 INTS9Q9NV88 658 aaKnown RBP18.4■□□□□ 0.54
SPG7-201ENST00000268704 MCM8Q9UJA3 840 aa18.4■□□□□ 0.54
SPG7-201ENST00000268704 PHF2O75151 1096 aa18.39■□□□□ 0.54
SPG7-201ENST00000268704 BBOX1O75936 387 aa18.39■□□□□ 0.54
SPG7-201ENST00000268704 NDUFB10O96000 172 aa18.39■□□□□ 0.54
SPG7-201ENST00000268704 TBC1D10BQ4KMP7 808 aaPredicted RBP18.39■□□□□ 0.54
SPG7-201ENST00000268704 ODR4Q5SWX8 454 aa18.39■□□□□ 0.54
SPG7-201ENST00000268704 CCDC137Q6PK04 289 aaKnown RBP18.39■□□□□ 0.54
SPG7-201ENST00000268704 ZSWIM2Q8NEG5 633 aa18.39■□□□□ 0.54
SPG7-201ENST00000268704 MGARPQ8TDB4 240 aa18.39■□□□□ 0.54
SPG7-201ENST00000268704 DCAF4Q8WV16 495 aa18.39■□□□□ 0.54
SPG7-201ENST00000268704 NAP1L3Q99457 506 aaPredicted RBP18.39■□□□□ 0.54
SPG7-201ENST00000268704 UBE2TQ9NPD8 197 aaPredicted RBP18.39■□□□□ 0.54
SPG7-201ENST00000268704 MYH11P35749 1972 aa18.39■□□□□ 0.53
SPG7-201ENST00000268704 SIPA1L1O43166 1804 aa18.39■□□□□ 0.53
SPG7-201ENST00000268704 IGLV3-22A0A075B6J6 115 aa18.39■□□□□ 0.53
SPG7-201ENST00000268704 EIF3DO15371 548 aaKnown RBP eCLIP18.39■□□□□ 0.53
SPG7-201ENST00000268704 EXOC3O60645 756 aa18.39■□□□□ 0.53
SPG7-201ENST00000268704 GYS1P13807 737 aa18.39■□□□□ 0.53
SPG7-201ENST00000268704 JAG1P78504 1218 aa18.39■□□□□ 0.53
SPG7-201ENST00000268704 DHX34Q14147 1143 aaKnown RBP18.39■□□□□ 0.53
SPG7-201ENST00000268704 MSL1Q68DK7 614 aa18.39■□□□□ 0.53
SPG7-201ENST00000268704 HS2ST1Q7LGA3 356 aa18.39■□□□□ 0.53
SPG7-201ENST00000268704 ZNF720Q7Z2F6 126 aa18.39■□□□□ 0.53
SPG7-201ENST00000268704 PGM2Q96G03 612 aa18.39■□□□□ 0.53
SPG7-201ENST00000268704 KDM4CQ9H3R0 1056 aa18.39■□□□□ 0.53
SPG7-201ENST00000268704 MLXIPLQ9NP71 852 aa18.39■□□□□ 0.53
SPG7-201ENST00000268704 TRPC5Q9UL62 973 aaPredicted RBP18.39■□□□□ 0.53
SPG7-201ENST00000268704 FAM187AA6NFU0 413 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 CCDC169A6NNP5 214 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 PPIP5K2O43314 1243 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 GAP43P17677 238 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 COMTP21964 271 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 GIMAP7Q8NHV1 300 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 ABCF3Q9NUQ8 709 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 PYGMP11217 842 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 ELF3P78545 371 aaPredicted RBP18.38■□□□□ 0.53
SPG7-201ENST00000268704 LRCH2Q5VUJ6 765 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 ZNF772Q68DY9 489 aaPredicted RBP18.38■□□□□ 0.53
SPG7-201ENST00000268704 OTOP1Q7RTM1 612 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 TCP11Q8WWU5 503 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 N4BP2L2Q92802 583 aaPredicted RBP18.38■□□□□ 0.53
SPG7-201ENST00000268704 TEKT1Q969V4 418 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 ELMO3Q96BJ8 720 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 RASAL2Q9UJF2 1139 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 TRPC6Q9Y210 931 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 CFBP00751 764 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 CREB1P16220 341 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 BFSP1Q12934 665 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 NEDD9Q14511 834 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 SH3BP5LQ7L8J4 393 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 KIAA0825Q8IV33 1275 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 RPUSD2Q8IZ73 545 aaKnown RBP18.38■□□□□ 0.53
SPG7-201ENST00000268704 LMO3Q8TAP4 145 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 CENPTQ96BT3 561 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 ZSWIM1Q9BR11 485 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 DDX23Q9BUQ8 820 aaKnown RBP18.38■□□□□ 0.53
SPG7-201ENST00000268704 SLC24A3Q9HC58 644 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 BAIAP2L1Q9UHR4 511 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 ODF2LQ9ULJ1 636 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 DIS3Q9Y2L1 958 aaKnown RBP18.38■□□□□ 0.53
SPG7-201ENST00000268704 PCDHA3Q9Y5H8 950 aa18.38■□□□□ 0.53
SPG7-201ENST00000268704 EMSYQ7Z589 1322 aa18.37■□□□□ 0.53
SPG7-201ENST00000268704 SYNGAP1Q96PV0 1343 aa18.37■□□□□ 0.53
SPG7-201ENST00000268704 PPEF1O14829 653 aaPredicted RBP18.37■□□□□ 0.53
SPG7-201ENST00000268704 KIF22Q14807 665 aa18.37■□□□□ 0.53
SPG7-201ENST00000268704 LONRF1Q17RB8 773 aa18.37■□□□□ 0.53
SPG7-201ENST00000268704 SYDE2Q5VT97 1194 aa18.37■□□□□ 0.53
SPG7-201ENST00000268704 SAMD1Q6SPF0 538 aaPredicted RBP18.37■□□□□ 0.53
SPG7-201ENST00000268704 SYCP3Q8IZU3 236 aa18.37■□□□□ 0.53
SPG7-201ENST00000268704 GJD4Q96KN9 370 aaPredicted RBP18.37■□□□□ 0.53
SPG7-201ENST00000268704 CCDC17Q96LX7 622 aa18.37■□□□□ 0.53
SPG7-201ENST00000268704 DNAJC17Q9NVM6 304 aaKnown RBP18.37■□□□□ 0.53
SPG7-201ENST00000268704 C10orf71Q711Q0 1435 aa18.37■□□□□ 0.53
SPG7-201ENST00000268704 CIITAP33076 1130 aa18.37■□□□□ 0.53
SPG7-201ENST00000268704 GCLMP48507 274 aa18.37■□□□□ 0.53
SPG7-201ENST00000268704 WLSQ5T9L3 541 aa18.37■□□□□ 0.53
SPG7-201ENST00000268704 MKL1Q969V6 931 aa18.37■□□□□ 0.53
SPG7-201ENST00000268704 PCDHB18PQ96TA0 734 aa18.37■□□□□ 0.53
SPG7-201ENST00000268704 ZC3H12CQ9C0D7 883 aaKnown RBP18.37■□□□□ 0.53
SPG7-201ENST00000268704 COA1Q9GZY4 146 aa18.37■□□□□ 0.53
SPG7-201ENST00000268704 RIPK2O43353 540 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 DNAJC8O75937 253 aaPredicted RBP18.36■□□□□ 0.53
SPG7-201ENST00000268704 PPP3CAQ08209 521 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 PIGWQ7Z7B1 504 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 TBC1D1Q86TI0 1168 aaPredicted RBP18.36■□□□□ 0.53
SPG7-201ENST00000268704 CCDC105Q8IYK2 499 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 ANKS4BQ8N8V4 417 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 DMAC2Q9NW81 257 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 NYAP2Q9P242 653 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 AGAP1Q9UPQ3 857 aa18.36■□□□□ 0.53
SPG7-201ENST00000268704 CLTAP09496 248 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms