RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 L3MBTL1Q9Y468 752 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 COL24A1Q17RW2 1714 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 CREB1P16220 341 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 ADCY1Q08828 1119 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 CDC42EP5Q6NZY7 148 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 PIGWQ7Z7B1 504 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 FBXO11Q86XK2 927 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 FAM178BQ8IXR5 827 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 SYT11Q9BT88 431 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 PCDHAC2Q9Y5I4 1007 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 TISP43B9A030 160 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 ASAP2O43150 1006 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 GDF11O95390 407 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 PYGMP11217 842 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 SLC8A1P32418 973 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 DLG4P78352 724 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 ADCY2Q08462 1091 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 PPP2R5EQ16537 467 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 Q4G0T1 1027 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 ODR4Q5SWX8 454 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 SEL1L2Q5TEA6 688 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 FAM196AQ6ZSG2 479 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 RPUSD2Q8IZ73 545 aaKnown RBP18.81■□□□□ 0.6
TRAM1-201ENST00000262213 PARVGQ9HBI0 331 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 AGPAT3Q9NRZ7 376 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 FGFR1OP2Q9NVK5 253 aa18.81■□□□□ 0.6
TRAM1-201ENST00000262213 UBOX5O94941 541 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 AGTP01019 485 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 CHRNA3P32297 505 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 KCNJ2P63252 427 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 SNX1Q13596 522 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 AUHQ13825 339 aaKnown RBP18.8■□□□□ 0.6
TRAM1-201ENST00000262213 TBC1D10BQ4KMP7 808 aaPredicted RBP18.8■□□□□ 0.6
TRAM1-201ENST00000262213 ARHGEF19Q8IW93 802 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 CRYGNQ8WXF5 182 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 C8orf37Q96NL8 207 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 DNAJC18Q9H819 358 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 SYNGAP1Q96PV0 1343 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 RIPK2O43353 540 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 GAP43P17677 238 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 MYO1EQ12965 1108 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 NAA25Q14CX7 972 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 ZKSCAN8Q15776 578 aaPredicted RBP18.8■□□□□ 0.6
TRAM1-201ENST00000262213 NSMFQ6X4W1 530 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 AEBP2Q6ZN18 517 aaPredicted RBP18.8■□□□□ 0.6
TRAM1-201ENST00000262213 TRMT1LQ7Z2T5 733 aaKnown RBP18.8■□□□□ 0.6
TRAM1-201ENST00000262213 KIF2BQ8N4N8 673 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 GDAP1Q8TB36 358 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 KAT5Q92993 513 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 RBM17Q96I25 401 aaKnown RBP18.8■□□□□ 0.6
TRAM1-201ENST00000262213 FAM20AQ96MK3 541 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 ZSWIM1Q9BR11 485 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 KCNK9Q9NPC2 374 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 OLFML3Q9NRN5 406 aa18.8■□□□□ 0.6
TRAM1-201ENST00000262213 SPATA31A6Q5VVP1 1343 aa18.79■□□□□ 0.6
TRAM1-201ENST00000262213 TCP11X1B4DZS4 312 aa18.79■□□□□ 0.6
TRAM1-201ENST00000262213 SPICE1Q8N0Z3 855 aa18.79■□□□□ 0.6
TRAM1-201ENST00000262213 THOC1Q96FV9 657 aaKnown RBP18.79■□□□□ 0.6
TRAM1-201ENST00000262213 DONSONQ9NYP3 566 aa18.79■□□□□ 0.6
TRAM1-201ENST00000262213 SLC12A4Q9UP95 1085 aa18.79■□□□□ 0.6
TRAM1-201ENST00000262213 TBX3O15119 743 aa18.79■□□□□ 0.6
TRAM1-201ENST00000262213 SPOPO43791 374 aa18.79■□□□□ 0.6
TRAM1-201ENST00000262213 CNGA2Q16280 664 aa18.79■□□□□ 0.6
TRAM1-201ENST00000262213 SPDYCQ5MJ68 293 aa18.79■□□□□ 0.6
TRAM1-201ENST00000262213 MOXD1Q6UVY6 613 aa18.79■□□□□ 0.6
TRAM1-201ENST00000262213 COL23A1Q86Y22 540 aaPredicted RBP18.79■□□□□ 0.6
TRAM1-201ENST00000262213 NSRP1Q9H0G5 558 aaKnown RBP18.79■□□□□ 0.6
TRAM1-201ENST00000262213 CTNNAL1Q9UBT7 734 aa18.79■□□□□ 0.6
TRAM1-201ENST00000262213 SMCHD1A6NHR9 2005 aa18.79■□□□□ 0.6
TRAM1-201ENST00000262213 RGL2O15211 777 aa18.78■□□□□ 0.6
TRAM1-201ENST00000262213 SLC26A4O43511 780 aa18.78■□□□□ 0.6
TRAM1-201ENST00000262213 C21orf2O43822 256 aa18.78■□□□□ 0.6
TRAM1-201ENST00000262213 SREBF1P36956 1147 aa18.78■□□□□ 0.6
TRAM1-201ENST00000262213 GCLMP48507 274 aa18.78■□□□□ 0.6
TRAM1-201ENST00000262213 ITIH4Q14624 930 aa18.78■□□□□ 0.6
TRAM1-201ENST00000262213 TRIP13Q15645 432 aaPredicted RBP18.78■□□□□ 0.6
TRAM1-201ENST00000262213 VPS72Q15906 364 aa18.78■□□□□ 0.6
TRAM1-201ENST00000262213 CERKLQ49MI3 558 aaPredicted RBP18.78■□□□□ 0.6
TRAM1-201ENST00000262213 C1orf186Q6ZWK4 172 aa18.78■□□□□ 0.6
TRAM1-201ENST00000262213 RHOT2Q8IXI1 618 aa18.78■□□□□ 0.6
TRAM1-201ENST00000262213 PRCCQ92733 491 aaPredicted RBP18.78■□□□□ 0.6
TRAM1-201ENST00000262213 ELMO3Q96BJ8 720 aa18.78■□□□□ 0.6
TRAM1-201ENST00000262213 ATP8B3O60423 1300 aa18.78■□□□□ 0.6
TRAM1-201ENST00000262213 FRMPD4Q14CM0 1322 aa18.78■□□□□ 0.6
TRAM1-201ENST00000262213 EMSYQ7Z589 1322 aa18.78■□□□□ 0.6
TRAM1-201ENST00000262213 SLITRK3O94933 977 aa18.78■□□□□ 0.6
TRAM1-201ENST00000262213 DLATP10515 647 aaKnown RBP18.78■□□□□ 0.6
TRAM1-201ENST00000262213 EXOC3L1Q86VI1 746 aa18.78■□□□□ 0.6
TRAM1-201ENST00000262213 C1orf54Q8WWF1 131 aa18.78■□□□□ 0.6
TRAM1-201ENST00000262213 STK38LQ9Y2H1 464 aa18.78■□□□□ 0.6
TRAM1-201ENST00000262213 CFBP00751 764 aa18.77■□□□□ 0.6
TRAM1-201ENST00000262213 BFSP1Q12934 665 aa18.77■□□□□ 0.6
TRAM1-201ENST00000262213 LRCH2Q5VUJ6 765 aa18.77■□□□□ 0.6
TRAM1-201ENST00000262213 ZNF720Q7Z2F6 126 aa18.77■□□□□ 0.6
TRAM1-201ENST00000262213 RPAINQ86UA6 219 aa18.77■□□□□ 0.6
TRAM1-201ENST00000262213 NGLY1Q96IV0 654 aa18.77■□□□□ 0.6
TRAM1-201ENST00000262213 POLR3CQ9BUI4 534 aaPredicted RBP18.77■□□□□ 0.6
TRAM1-201ENST00000262213 CEP83Q9Y592 693 aa18.77■□□□□ 0.6
TRAM1-201ENST00000262213 F5H6K3 240 aa18.77■□□□□ 0.6
TRAM1-201ENST00000262213 EIF3DO15371 548 aaKnown RBP eCLIP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms