RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 AATKQ6ZMQ8 1374 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 ADGRL2O95490 1459 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 IQCA1LA6NCM1 817 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 HLA-DPA1P20036 260 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 QARSP47897 775 aaKnown RBP14.08□□□□□ -0.16
COL1A1-201ENST00000225964 SYTL3Q4VX76 610 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 SENP1Q9P0U3 644 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 APOBEC2Q9Y235 224 aaKnown RBP14.08□□□□□ -0.16
COL1A1-201ENST00000225964 SYNMO15061 1565 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 TRIM49BA6NDI0 452 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 ASB14A6NK59 587 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 TADA2AO75478 443 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 P4HBP07237 508 aaKnown RBP14.08□□□□□ -0.16
COL1A1-201ENST00000225964 MCF2P10911 925 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 PFKFB3Q16875 520 aaPredicted RBP14.08□□□□□ -0.16
COL1A1-201ENST00000225964 ABHD8Q96I13 439 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 KIFC3Q9BVG8 833 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 NARFQ9UHQ1 456 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 NFU1Q9UMS0 254 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 GTPBP10A4D1E9 387 aaKnown RBP14.07□□□□□ -0.16
COL1A1-201ENST00000225964 ZSCAN9O15535 394 aaPredicted RBP14.07□□□□□ -0.16
COL1A1-201ENST00000225964 SPARCL1Q14515 664 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 VSTM4Q8IW00 320 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 SYT2Q8N9I0 419 aaPredicted RBP14.07□□□□□ -0.16
COL1A1-201ENST00000225964 SLC44A5Q8NCS7 719 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 ZNF564Q8TBZ8 553 aaPredicted RBP14.07□□□□□ -0.16
COL1A1-201ENST00000225964 CDV3Q9UKY7 258 aaKnown RBP14.07□□□□□ -0.16
COL1A1-201ENST00000225964 PLAAQ9Y263 795 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 ERBB3P21860 1342 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 SYNGAP1Q96PV0 1343 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 CPDO75976 1380 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 PFDN1O60925 122 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 ZRANB2O95218 330 aaKnown RBP eCLIP14.07□□□□□ -0.16
COL1A1-201ENST00000225964 EFTUD2Q15029 972 aaKnown RBP eCLIP14.07□□□□□ -0.16
COL1A1-201ENST00000225964 SLFNL1Q499Z3 407 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 FAM102AQ5T9C2 384 aaPredicted RBP14.07□□□□□ -0.16
COL1A1-201ENST00000225964 RESP18Q5W5W9 173 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 DDIASQ8IXT1 998 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 ZNF513Q8N8E2 541 aaPredicted RBP14.07□□□□□ -0.16
COL1A1-201ENST00000225964 LXNQ9BS40 222 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 SEL1LQ9UBV2 794 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 POTEFA5A3E0 1075 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 PODXLO00592 558 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 POTEIP0CG38 1075 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 ITPRIPL1Q6GPH6 555 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 POTEGQ6S5H5 508 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 POTEEQ6S8J3 1075 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 CYB5R4Q7L1T6 521 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 LRRC37BQ96QE4 947 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 PANX2Q96RD6 677 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 INTS2Q9H0H0 1204 aaKnown RBP14.07□□□□□ -0.16
COL1A1-201ENST00000225964 CHCHD3Q9NX63 227 aaKnown RBP14.07□□□□□ -0.16
COL1A1-201ENST00000225964 SHROOM2Q13796 1616 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 ST8SIA6P61647 398 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 GFPT1Q06210 699 aaPredicted RBP14.07□□□□□ -0.16
COL1A1-201ENST00000225964 WDR75Q8IWA0 830 aaKnown RBP14.07□□□□□ -0.16
COL1A1-201ENST00000225964 RBAKQ9NYW8 714 aaPredicted RBP14.07□□□□□ -0.16
COL1A1-201ENST00000225964 CTIFO43310 598 aaKnown RBP14.07□□□□□ -0.16
COL1A1-201ENST00000225964 HMBSP08397 361 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 EIF3BP55884 814 aaKnown RBP14.07□□□□□ -0.16
COL1A1-201ENST00000225964 CUL1Q13616 776 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 DGKHQ86XP1 1220 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 PPP2R3CQ969Q6 453 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 TRIM33Q9UPN9 1127 aa14.07□□□□□ -0.16
COL1A1-201ENST00000225964 ARHGAP10A1A4S6 786 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 LIFRP42702 1097 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 ZNF157P51786 506 aaPredicted RBP14.06□□□□□ -0.16
COL1A1-201ENST00000225964 WASHC5Q12768 1159 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 RESTQ13127 1097 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 GPD1LQ8N335 351 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 TSSK1BQ9BXA7 367 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 PTCH1Q13635 1447 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 CTSHP09668 335 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 PPP1R18Q6NYC8 613 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 EPM2AIP1Q7L775 607 aaPredicted RBP14.06□□□□□ -0.16
COL1A1-201ENST00000225964 TADA2BQ86TJ2 420 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 EXOC4Q96A65 974 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 NAF1Q96HR8 494 aaKnown RBP14.06□□□□□ -0.16
COL1A1-201ENST00000225964 STRBPQ96SI9 672 aaKnown RBP14.06□□□□□ -0.16
COL1A1-201ENST00000225964 NR1D1P20393 614 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 TBC1D10CQ8IV04 446 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 OR6P1Q8NGX9 317 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 ZFYVE19Q96K21 471 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 ZNF560Q96MR9 790 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 KRT38O76015 456 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 FAM117BQ6P1L5 589 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 PODNQ7Z5L7 613 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 ABTB1Q969K4 478 aaPredicted RBP14.06□□□□□ -0.16
COL1A1-201ENST00000225964 VGLL3A8MV65 326 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 SPAG7O75391 227 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 LARGE1O95461 756 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 COPB2P35606 906 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 PSMC5P62195 406 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 MDM2Q00987 491 aaPredicted RBP14.06□□□□□ -0.16
COL1A1-201ENST00000225964 MTMR2Q13614 643 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 CENPKQ9BS16 269 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 ASPSCR1Q9BZE9 553 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 SLC9A2Q9UBY0 812 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 SNX24Q9Y343 169 aa14.06□□□□□ -0.16
COL1A1-201ENST00000225964 RASA4BC9J798 803 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms