RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 ADCY3O60266 1144 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 PIGRP01833 764 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 ZNF286BP0CG31 522 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 PON1P27169 355 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 VAMP7P51809 220 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 POLR2FP61218 127 aaKnown RBP19.77■□□□□ 0.76
VIM-201ENST00000224237 SNRNP35Q16560 246 aaKnown RBP19.77■□□□□ 0.76
VIM-201ENST00000224237 DGKDQ16760 1214 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 PDXDC1Q6P996 788 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 REXO1L1PQ8IX06 675 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 FBXL18Q96ME1 805 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 C16orf70Q9BSU1 422 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 GANQ9H2C0 597 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 FBXL5Q9UKA1 691 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 R3HCC1Q9Y3T6 440 aaKnown RBP19.77■□□□□ 0.76
VIM-201ENST00000224237 COL1A2P08123 1366 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 TUBB4AP04350 444 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 TRIM49P0CI25 452 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 TRIM49CP0CI26 452 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 SLC9A1P19634 815 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 EFNA5P52803 228 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 MKRN4PQ13434 485 aaPredicted RBP19.77■□□□□ 0.76
VIM-201ENST00000224237 LRRC71Q8N4P6 559 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 TRAPPC12Q8WVT3 735 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 SYN2Q92777 582 aaPredicted RBP19.77■□□□□ 0.76
VIM-201ENST00000224237 NLRC4Q9NPP4 1024 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 CREBZFQ9NS37 354 aa19.77■□□□□ 0.76
VIM-201ENST00000224237 H3BRB1 525 aa19.76■□□□□ 0.75
VIM-201ENST00000224237 KIAA0391O15091 583 aaKnown RBP19.76■□□□□ 0.75
VIM-201ENST00000224237 N4BP1O75113 896 aaKnown RBP19.76■□□□□ 0.75
VIM-201ENST00000224237 NDUFA10O95299 355 aa19.76■□□□□ 0.75
VIM-201ENST00000224237 ZNF865P0CJ78 1059 aaPredicted RBP19.76■□□□□ 0.75
VIM-201ENST00000224237 INSRRP14616 1297 aa19.76■□□□□ 0.75
VIM-201ENST00000224237 MCCD1P59942 119 aaPredicted RBP19.76■□□□□ 0.75
VIM-201ENST00000224237 CAP1Q01518 475 aa19.76■□□□□ 0.75
VIM-201ENST00000224237 LAMTOR4Q0VGL1 99 aa19.76■□□□□ 0.75
VIM-201ENST00000224237 CDCA2Q69YH5 1023 aaPredicted RBP19.76■□□□□ 0.75
VIM-201ENST00000224237 CCDC170Q8IYT3 715 aa19.76■□□□□ 0.75
VIM-201ENST00000224237 GPD1LQ8N335 351 aa19.76■□□□□ 0.75
VIM-201ENST00000224237 ZBTB10Q96DT7 871 aa19.76■□□□□ 0.75
VIM-201ENST00000224237 TUT1Q9H6E5 874 aaKnown RBP19.76■□□□□ 0.75
VIM-201ENST00000224237 EPN1Q9Y6I3 576 aaPredicted RBP19.76■□□□□ 0.75
VIM-201ENST00000224237 STYXL1Q9Y6J8 313 aa19.76■□□□□ 0.75
VIM-201ENST00000224237 MAGEB2O15479 319 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 C22orf31O95567 290 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 TBC1D8O95759 1140 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 ADRB2P07550 413 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 CYLC1P35663 651 aaPredicted RBP19.75■□□□□ 0.75
VIM-201ENST00000224237 PSMC4P43686 418 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 MYL7Q01449 175 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 HSP90AA2PQ14568 343 aaPredicted RBP19.75■□□□□ 0.75
VIM-201ENST00000224237 CBWD6Q4V339 395 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 CBWD3Q5JTY5 395 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 CBWD5Q5RIA9 395 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 KLHDC7AQ5VTJ3 777 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 EFCAB12Q6NXP0 572 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 USP37Q86T82 979 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 CBWD2Q8IUF1 395 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 ZBTB8OSQ8IWT0 167 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 ZSWIM2Q8NEG5 633 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 SAAL1Q96ER3 474 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 C2orf40Q9H1Z8 148 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 SUCLA2Q9P2R7 463 aaPredicted RBP19.75■□□□□ 0.75
VIM-201ENST00000224237 GNEQ9Y223 722 aaKnown RBP19.75■□□□□ 0.75
VIM-201ENST00000224237 GOLGA8IPA6NC78 632 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 GOLGA8JA6NMD2 632 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 P4HA2O15460 535 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 UCHL3P15374 230 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 APLP1P51693 650 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 IRX5P78411 483 aaPredicted RBP19.75■□□□□ 0.75
VIM-201ENST00000224237 LACTBP83111 547 aaPredicted RBP19.75■□□□□ 0.75
VIM-201ENST00000224237 ENPEPQ07075 957 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 CETN1Q12798 172 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 TFDP1Q14186 410 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 SLFN12LQ6IEE8 588 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 DPY19L2P1Q6NXN4 242 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 TRIM65Q6PJ69 517 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 METTL13Q8N6R0 699 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 RNF149Q8NC42 400 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 NHEJ1Q9H9Q4 299 aaPredicted RBP19.75■□□□□ 0.75
VIM-201ENST00000224237 KIAA1586Q9HCI6 787 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 GABRQQ9UN88 632 aa19.75■□□□□ 0.75
VIM-201ENST00000224237 ASAP2O43150 1006 aa19.74■□□□□ 0.75
VIM-201ENST00000224237 ACTN1P12814 892 aa19.74■□□□□ 0.75
VIM-201ENST00000224237 YY1P25490 414 aa19.74■□□□□ 0.75
VIM-201ENST00000224237 FCGRTP55899 365 aa19.74■□□□□ 0.75
VIM-201ENST00000224237 DLG4P78352 724 aa19.74■□□□□ 0.75
VIM-201ENST00000224237 HTRA3P83110 453 aa19.74■□□□□ 0.75
VIM-201ENST00000224237 APBA1Q02410 837 aa19.74■□□□□ 0.75
VIM-201ENST00000224237 SFMBT2Q5VUG0 894 aa19.74■□□□□ 0.75
VIM-201ENST00000224237 RHPN2Q8IUC4 686 aa19.74■□□□□ 0.75
VIM-201ENST00000224237 MYO6Q9UM54 1294 aa19.74■□□□□ 0.75
VIM-201ENST00000224237 DAAM1Q9Y4D1 1078 aa19.74■□□□□ 0.75
VIM-201ENST00000224237 A6NJR5 290 aa19.73■□□□□ 0.75
VIM-201ENST00000224237 DYNC1LI2O43237 492 aaPredicted RBP19.73■□□□□ 0.75
VIM-201ENST00000224237 IGHA2P01877 340 aa19.73■□□□□ 0.75
VIM-201ENST00000224237 IGBP1P78318 339 aa19.73■□□□□ 0.75
VIM-201ENST00000224237 TLK2Q86UE8 772 aa19.73■□□□□ 0.75
VIM-201ENST00000224237 ACRBPQ8NEB7 543 aa19.73■□□□□ 0.75
VIM-201ENST00000224237 MFSD14AQ96MC6 490 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms