RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Trove2O08848 538 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Dnmt3aO88508 908 aaKnown RBP6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Slc3a2P10852 526 aaKnown RBP6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Akr1b8P45377 316 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Eepd1Q3TGW2 569 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Gxylt1Q3UHH8 404 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Nr1d1Q3UV55 615 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Syne3Q4FZC9 975 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Klra7Q60654 280 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Akap4Q60662 849 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Gbp4Q61107 620 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 TpppQ7TQD2 218 aaKnown RBP6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 SargQ8BI29 606 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Chtf18Q8BIW9 969 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Scfd2Q8BTY8 684 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Slc13a4Q8BZ82 625 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Efl1Q8C0D5 1127 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Usp37Q8C0R0 979 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ttc22Q8C159 568 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Lmbrd1Q8K0B2 537 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Kiaa1024Q8K3V7 917 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Pstpip2Q99M15 334 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Cfap57Q9D180 1249 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Cfap53Q9D439 514 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Paip2Q9D6V8 124 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 2310002L09RikQ9D7L5 217 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Sept14Q9DA97 430 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Jag1Q9QXX0 1218 aa6.74□□□□□ -1.33
Lig4-202ENSMUST00000170033 Brca1P48754 1812 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Fam155bA2BDP1 471 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ace3D0G895 737 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Nfxl1E9Q8I7 918 aaKnown RBP6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 E9QMW4 1145 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Enc1O35709 589 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 S100bP50114 92 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ddr1Q03146 911 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Brip1Q5SXJ3 1174 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Krt15Q61414 452 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Six2Q62232 296 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ephx4Q6IE26 359 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 E2f7Q6S7F2 904 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Haus1Q8BHX1 278 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Daam1Q8BPM0 1077 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Trim14Q8BVW3 440 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 CgasQ8C6L5 507 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Nemp2Q8CB65 421 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Pi4k2bQ8CBQ5 469 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 SfpqQ8VIJ6 699 aaKnown RBP6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Q91Z58 1206 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Aldh1b1Q9CZS1 519 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Eif3fQ9DCH4 361 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Add1Q9QYC0 735 aaKnown RBP6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Syngap1F6SEU4 1340 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Osbpl7A2A716 963 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Krt36B1AQ75 473 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Zfp277E9Q6D6 583 aaKnown RBP6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 TyrobpO54885 114 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 LdhbP16125 334 aaKnown RBP6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Frg1P97376 258 aaKnown RBP6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Q3V0E1 1183 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Slc30a9Q5IRJ6 567 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Vav2Q60992 868 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Insm1Q63ZV0 521 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ccdc88cQ6VGS5 2009 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ints8Q80V86 995 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Bbs9Q811G0 885 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 AopepQ8BXQ6 817 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Lrrc45Q8CIM1 670 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Mettl5Q8K1A0 209 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Unc5bQ8K1S3 945 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Onecut3Q8K557 490 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Cys1Q8R4T1 145 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Bhmt2Q91WS4 363 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Rnf167Q91XF4 347 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Srgap2Q91Z67 1071 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Dqx1Q924H9 718 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Txnrd3Q99MD6 652 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 IqcdQ9D3V1 458 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Nxnl2Q9D531 156 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Tgm5Q9D7I9 724 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Spaca1Q9DA48 305 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Hebp1Q9R257 190 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Sbno2Q7TNB8 1349 aa6.73□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ap1b1O35643 943 aaKnown RBP6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 AurkbO70126 345 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Pla2g4aP47713 748 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Spata18Q0P557 537 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 4933427I04RikQ3V053 235 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Cnot7Q60809 285 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Exoc3Q6KAR6 755 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Zic5Q7TQ40 622 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 KhnynQ80U38 671 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 F13a1Q8BH61 732 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Zswim4Q8C7B8 1101 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 PpatQ8CIH9 517 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Kiaa0391Q8JZY4 584 aaKnown RBP6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ccdc80Q8R2G6 949 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Oxnad1Q8VE38 311 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Adgrf1Q8VEC3 908 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Foxp3Q99JB6 429 aa6.72□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 51.4 ms