RNA–Protein interactions for RNA: ENSMUST00000099937.4

Ccdc58-201, Transcript of Coiled-coil domain-containing protein 58, mousemouse

TSL 3 BASIC

Gene Ccdc58, Length 747 nt, Biotype protein coding, Subcellular localisation Axon, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58-201ENSMUST00000099937 Uhrf1Q8VDF2 782 aaKnown RBP15.17■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Ccdc71Q8VEG0 433 aa15.17■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Olfr532Q8VGT4 309 aa15.17■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Lman1Q9D0F3 517 aa15.17■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Zfhx2Q2MHN3 2562 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Prr22F6TNE3 422 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 P01878 344 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 PparaP23204 468 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Wnt7bP28047 349 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Cplx1P63040 134 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Tatdn3Q3U1C6 294 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Wdr18Q4VBE8 431 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Ccdc125Q5U465 500 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Ptpn14Q62130 1189 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Smad2Q62432 467 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Krba1Q6NXZ1 1043 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Smarca1Q6PGB8 1046 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Klhl17Q6TDP3 640 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Tas2r124Q7M718 309 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Slc17a8Q8BFU8 601 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Pak2Q8CIN4 524 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Evc2Q8K1G2 1220 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Cep57l1Q8VDS7 400 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Fuca2Q99KR8 461 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Ino80bQ99PT3 375 aaKnown RBP15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Scrn1Q9CZC8 414 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Gfra4Q9JJT2 260 aa15.16■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Myh11O08638 1972 aa15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Igkv17-121A0A0G2JFA8 117 aa15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Clca3bE9PUL3 1044 aa15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Smarce1O54941 411 aaKnown RBP15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Itgb1P09055 798 aaKnown RBP15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Ccl4P14097 92 aa15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Ube2zQ3UE37 356 aa15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Znf235Q61116 645 aa15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Elavl4Q61701 385 aaKnown RBP15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 PtprjQ64455 1238 aa15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Usp49Q6P9L4 685 aa15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Mtss1lQ6P9S0 715 aa15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Amz1Q8BVF9 502 aa15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Zfp113Q8C689 439 aa15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Fam129bQ8R1F1 749 aa15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Zfp623Q9CY99 499 aa15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Noxred1Q9D3S5 366 aa15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Atp13a1Q9EPE9 1200 aaKnown RBP15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Fgf22Q9ESS2 162 aa15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Ly6g6dQ9Z1Q3 135 aa15.15■□□□□ 0.02
Ccdc58-201ENSMUST00000099937 Wfdc11A2A5H7 82 aa15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Cyp26c1B2RXA7 518 aa15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Gm8369E9PZI3 166 aa15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Itm2bO89051 266 aa15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Fgfr1P16092 822 aa15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Psmc2P46471 433 aa15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Znrf3Q5SSZ7 913 aa15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Cd180Q62192 661 aa15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 EfsQ64355 560 aa15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Abi1Q8CBW3 481 aa15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 DpydQ8CHR6 1025 aa15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Olfr390Q8VEZ7 311 aa15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Slc14a1Q8VHL0 384 aa15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Atp6v0a4Q920R6 833 aa15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Kremen1Q99N43 473 aa15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Smc3Q9CW03 1217 aaKnown RBP15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Gde1Q9JL56 331 aa15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Pex3Q9QXY9 372 aa15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Eya4Q9Z191 616 aa15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 CenpfE9Q3P4 2997 aaKnown RBP15.14■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Tatdn2B7ZNL9 783 aaKnown RBP15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Gimd1E9PW74 217 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 2010300C02RikE9Q3M9 1175 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Gm11239E9Q5Z9 360 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Gm11237F2Z3W5 360 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Gm11238F2Z478 360 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Idh1O88844 414 aaKnown RBP15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Serpina1aP07758 413 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Serpina1bP22599 413 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Dpep1P31428 410 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Pcbp1P60335 356 aaKnown RBP15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Nrp1P97333 923 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Smad4P97471 551 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Serpina1cQ00896 412 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Serpina1dQ00897 413 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Grin2cQ01098 1239 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Gtf2f1Q3THK3 508 aaKnown RBP15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Gm428Q3UTE2 360 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Prl2c1Q5SVL9 228 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 P4ha1Q60715 534 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Exoc3Q6KAR6 755 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Q6P2K3 674 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Rexo1Q7TT28 1213 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Vps52Q8C754 723 aaKnown RBP15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Gdpd2Q9ESM6 539 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Habp4Q9JKS5 411 aaKnown RBP15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Clic4Q9QYB1 253 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 AmfrQ9R049 643 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Stxbp4Q9WV89 557 aa15.13■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 1700017N19RikA0A087WPJ1 469 aa15.12■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Gm45194A0A140LJG2 572 aa15.12■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 Ccdc173A0JLY1 547 aa15.12■□□□□ 0.01
Ccdc58-201ENSMUST00000099937 TrdnE9Q9K5 693 aa15.12■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms