RNA–Protein interactions for RNA: ENSMUST00000008004.9

Ddx49-201, Transcript of Probable ATP-dependent RNA helicase DDX49, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx49, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49-201ENSMUST00000008004 Rnaseh1O70338 285 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Tap2P36371 702 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Tmod1P49813 359 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Mfsd14aP70187 490 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Hoxb13P70321 286 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 GaaP70699 953 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Nfe2Q07279 373 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Tfdp1Q08639 410 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Pnpla5Q32LZ8 432 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Mfhas1Q3V1N1 1048 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Mrps31Q61733 384 aaKnown RBP16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Six2Q62232 296 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Epn1Q80VP1 575 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Tbc1d10bQ8BHL3 798 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 6820408C15RikQ8BJX2 354 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Ttc26Q8BS45 554 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Brd3Q8K2F0 726 aaKnown RBP16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Ablim1Q8K4G5 861 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Egfl6Q9JJZ5 550 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Tlr2Q9QUN7 784 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 A0A286YCQ6 122 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 4930544D05RikJ3QK56 214 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Guca2bO09051 106 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Hoxd10P28359 340 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 IppP28575 584 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Ccr5P51682 354 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Edem3Q2HXL6 931 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Cyp11b1Q3TG86 501 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Xkr4Q5GH67 647 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Agbl2Q8CDK2 862 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 CenpqQ9CPQ5 267 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Ifi35Q9D8C4 286 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Fthl17aQ9DAX0 182 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Usp29Q9ES63 869 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Tll2Q9WVM6 1012 aa16.78■□□□□ 0.28
Ddx49-201ENSMUST00000008004 SktA2AQ25 1946 aaKnown RBP16.77■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Gm11985A0A1B0GS61 206 aa16.77■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Svs3aF2Z472 265 aa16.77■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Znf865Q3U3I9 1058 aa16.77■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Clul1Q3ZRW6 464 aa16.77■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Cyp2c29Q64458 490 aa16.77■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Pop1Q8K205 1045 aa16.77■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Klhl20Q8VCK5 604 aa16.77■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Ccdc96Q9CR92 584 aa16.77■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Six6os1Q9CTN5 574 aa16.77■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Erp44Q9D1Q6 406 aa16.77■□□□□ 0.28
Ddx49-201ENSMUST00000008004 Slc6a21A0A1B0GSD2 748 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 GartQ64737 1010 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Znf507Q6ZPY5 941 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Suz12Q80U70 741 aaKnown RBP16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 RragaQ80X95 313 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Plekha4Q8VC98 588 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Pcdha2Q91Y17 948 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Prmt2Q9R144 448 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Jakmip2D3YXK0 820 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Kng1O08677 661 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Calb1P12658 261 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 rp9P97762 213 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Tp53i13Q5F267 385 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Avpr1aQ62463 423 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Tcaf3Q6QR59 914 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Tmem117Q8BH18 514 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Pkn2Q8BWW9 983 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Lmo3Q8BZL8 145 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Rnf208Q8K0W3 265 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Desi2Q9D291 194 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 FignQ9ERZ6 759 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 JmyQ9QXM1 983 aa16.76■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Hoxc8P09025 242 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Cyp2c37P56654 490 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Klra6Q60653 266 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Cyp2c54Q6XVG2 490 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Slc9a9Q8BZ00 644 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Fam155aQ8CCS2 467 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Cyp2c50Q91X77 490 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Sppl3Q9CUS9 384 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Castor1Q9CWQ8 331 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Drc3Q9D5E4 523 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Maged1Q9QYH6 775 aaKnown RBP16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Pds5aQ6A026 1332 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Ttll8A4Q9F1 832 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Gm28042B7ZCM9 1014 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Nr1i3O35627 358 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Map2k1P31938 393 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Scarf2P59222 833 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Oas1fQ14AZ4 364 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Dpcr1Q3TNW5 500 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Smyd5Q3TYX3 416 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Mansc4Q3UU94 337 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Q5XFZ0 217 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Phlda1Q62392 405 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 FAM120AQ6A0A9 1112 aaKnown RBP16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Panx2Q6IMP4 677 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 ShbQ6PD21 503 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Elac2Q80Y81 831 aaKnown RBP16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Qsox1Q8BND5 748 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Leg1Q8C6C9 337 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Arl8aQ8VEH3 186 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 4931423N10RikQ9D4J9 382 aa16.75■□□□□ 0.27
Ddx49-201ENSMUST00000008004 Mzb1Q9D8I1 188 aa16.75■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms