RNA–Protein interactions for RNA: YCR072C

RSA4, Transcript of WD-repeat protein involved in ribosome biogenesis, yeast

Gene RSA4, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA4	YCR072C	ECM22	Q05958	814 aa	Predicted RBP	5.74	□□□□□ -1.49
RSA4	YCR072C	RIF2	Q06208	395 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	YPL260W	Q08977	551 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	YDL199C	Q12407	687 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	GIS3	Q12418	502 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	YPR014C	Q6B0W2	109 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	PEP4	P07267	405 aa	Known RBP	5.74	□□□□□ -1.49
RSA4	YCR072C	URA6	P15700	204 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	FUN14	P18411	198 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	YCR015C	P25616	317 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	MSN2	P33748	704 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	ASK1	P35734	292 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	MUP3	P38734	546 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	DHH1	P39517	506 aa	Known RBP	5.74	□□□□□ -1.49
RSA4	YCR072C	MMF1	P40185	145 aa	Known RBP	5.74	□□□□□ -1.49
RSA4	YCR072C	PAN6	P40459	309 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	RPL10	P41805	221 aa	Known RBP	5.74	□□□□□ -1.49
RSA4	YCR072C	GDS1	P41913	522 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	ATG18	P43601	500 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	MNN10	P50108	393 aa	Known RBP	5.74	□□□□□ -1.49
RSA4	YCR072C	VOA1	P53262	265 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	TIM13	P53299	105 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	OGG1	P53397	376 aa	Predicted RBP	5.74	□□□□□ -1.49
RSA4	YCR072C	PRP38	Q00723	242 aa	Predicted RBP	5.74	□□□□□ -1.49
RSA4	YCR072C	YMR160W	Q03823	816 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	YAP6	Q03935	383 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	SKG3	Q06315	1026 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	SSK1	Q07084	712 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	RFU1	Q08003	200 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	YPL245W	Q12179	454 aa	Known RBP	5.74	□□□□□ -1.49
RSA4	YCR072C	RRP42	Q12277	265 aa	Predicted RBP	5.74	□□□□□ -1.49
RSA4	YCR072C	WTM1	Q12363	437 aa	Known RBP	5.74	□□□□□ -1.49
RSA4	YCR072C	YPR145C-A	Q2V2P0	78 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	YBR126W-A	Q8TGU7	68 aa		5.74	□□□□□ -1.49
RSA4	YCR072C	FBP1	P09201	348 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	RPL31A	P0C2H8	113 aa	Known RBP	5.73	□□□□□ -1.49
RSA4	YCR072C	RPL31B	P0C2H9	113 aa	Known RBP	5.73	□□□□□ -1.49
RSA4	YCR072C	RPL4A	P10664	362 aa	Known RBP	5.73	□□□□□ -1.49
RSA4	YCR072C	NAM2	P11325	894 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	NHP6B	P11633	99 aa	Known RBP	5.73	□□□□□ -1.49
RSA4	YCR072C	CAF20	P12962	161 aa	Known RBP	5.73	□□□□□ -1.49
RSA4	YCR072C	SEC62	P21825	274 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	GID7	P25569	745 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	SRO77	P38163	1010 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	YEL057C	P39983	233 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	NPP2	P39997	493 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	ZAP1	P47043	880 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	TAD2	P47058	250 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	RPL4B	P49626	362 aa	Known RBP	5.73	□□□□□ -1.49
RSA4	YCR072C	TAF4	P50105	388 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	YPR003C	P53394	754 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	ARG5,6	Q01217	863 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	GAS3	Q03655	524 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	RKM2	Q03942	479 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	YDR124W	Q04608	324 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	SEN15	Q04675	128 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	YOL019W	Q08157	551 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	YPL272C	Q08984	517 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	RAD28	Q12021	506 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	AHC1	Q12433	566 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	PSF1	Q12488	208 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	SFG1	Q12507	346 aa		5.73	□□□□□ -1.49
RSA4	YCR072C	ADE4	P04046	510 aa	Known RBP	5.72	□□□□□ -1.49
RSA4	YCR072C	YPK1	P12688	680 aa	Known RBP	5.72	□□□□□ -1.49
RSA4	YCR072C	ART10	P18634	518 aa	Known RBP	5.72	□□□□□ -1.49
RSA4	YCR072C	PRE1	P22141	198 aa	Known RBP	5.72	□□□□□ -1.49
RSA4	YCR072C	RFA1	P22336	621 aa	Known RBP	5.72	□□□□□ -1.49
RSA4	YCR072C	CPR4	P25334	318 aa		5.72	□□□□□ -1.49
RSA4	YCR072C	YCR061W	P25639	631 aa		5.72	□□□□□ -1.49
RSA4	YCR072C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
RSA4	YCR072C	PTK1	P36002	662 aa	Predicted RBP	5.72	□□□□□ -1.49
RSA4	YCR072C	DTR1	P38125	572 aa		5.72	□□□□□ -1.49
RSA4	YCR072C	POA1	P38218	177 aa		5.72	□□□□□ -1.49
RSA4	YCR072C	SRP68	P38687	599 aa	Known RBP	5.72	□□□□□ -1.49
RSA4	YCR072C	UBA4	P38820	440 aa		5.72	□□□□□ -1.49
RSA4	YCR072C	SLZ1	P40167	298 aa		5.72	□□□□□ -1.49
RSA4	YCR072C	PKP1	P40530	394 aa		5.72	□□□□□ -1.49
RSA4	YCR072C	YJL132W	P47014	750 aa		5.72	□□□□□ -1.49
RSA4	YCR072C	PHO23	P50947	330 aa		5.72	□□□□□ -1.49
RSA4	YCR072C	STR3	P53101	465 aa	Known RBP	5.72	□□□□□ -1.49
RSA4	YCR072C	CUE4	Q04201	117 aa	Predicted RBP	5.72	□□□□□ -1.49
RSA4	YCR072C	TPO3	Q06451	622 aa		5.72	□□□□□ -1.49
RSA4	YCR072C	YLL056C	Q12177	298 aa		5.72	□□□□□ -1.49
RSA4	YCR072C	RIM15	P43565	1770 aa		5.72	□□□□□ -1.49
RSA4	YCR072C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
RSA4	YCR072C	ERD1	P16151	362 aa		5.71	□□□□□ -1.5
RSA4	YCR072C	RPB3	P16370	318 aa	Known RBP	5.71	□□□□□ -1.5
RSA4	YCR072C	AHC2	P25649	128 aa		5.71	□□□□□ -1.5
RSA4	YCR072C	ERV1	P27882	189 aa		5.71	□□□□□ -1.5
RSA4	YCR072C	HOM6	P31116	359 aa	Known RBP	5.71	□□□□□ -1.5
RSA4	YCR072C	CDC5	P32562	705 aa		5.71	□□□□□ -1.5
RSA4	YCR072C	SFC1	P33303	322 aa		5.71	□□□□□ -1.5
RSA4	YCR072C	FLR1	P38124	548 aa		5.71	□□□□□ -1.5
RSA4	YCR072C	PEX7	P39108	375 aa		5.71	□□□□□ -1.5
RSA4	YCR072C	PRM9	P39551	298 aa		5.71	□□□□□ -1.5
RSA4	YCR072C	VAB2	P40003	282 aa		5.71	□□□□□ -1.5
RSA4	YCR072C	SPO73	P40031	143 aa		5.71	□□□□□ -1.5
RSA4	YCR072C	BUR6	P40096	142 aa		5.71	□□□□□ -1.5
RSA4	YCR072C	SSU1	P41930	458 aa		5.71	□□□□□ -1.5
RSA4	YCR072C	GAT1	P43574	510 aa		5.71	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms