RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 TBC1D13Q9NVG8 400 aa18.71■□□□□ 0.59
PHGDH-213ENST00000641272 TRIOO75962 3097 aa18.7■□□□□ 0.58
PHGDH-213ENST00000641272 C2orf71A6NGG8 1288 aa18.7■□□□□ 0.58
PHGDH-213ENST00000641272 MARCH6O60337 910 aa18.7■□□□□ 0.58
PHGDH-213ENST00000641272 LARGE1O95461 756 aa18.7■□□□□ 0.58
PHGDH-213ENST00000641272 CTDNEP1O95476 244 aa18.7■□□□□ 0.58
PHGDH-213ENST00000641272 WEE2P0C1S8 567 aa18.7■□□□□ 0.58
PHGDH-213ENST00000641272 ALDH7A1P49419 539 aaKnown RBP18.7■□□□□ 0.58
PHGDH-213ENST00000641272 ZXDAP98168 799 aa18.7■□□□□ 0.58
PHGDH-213ENST00000641272 NR5A1Q13285 461 aa18.7■□□□□ 0.58
PHGDH-213ENST00000641272 GLB1LQ6UWU2 654 aa18.7■□□□□ 0.58
PHGDH-213ENST00000641272 TRIM67Q6ZTA4 783 aa18.7■□□□□ 0.58
PHGDH-213ENST00000641272 SLC7A3Q8WY07 619 aa18.7■□□□□ 0.58
PHGDH-213ENST00000641272 HAS1Q92839 578 aa18.7■□□□□ 0.58
PHGDH-213ENST00000641272 DYDC2Q96IM9 177 aa18.7■□□□□ 0.58
PHGDH-213ENST00000641272 CHST12Q9NRB3 414 aa18.7■□□□□ 0.58
PHGDH-213ENST00000641272 RGL1Q9NZL6 768 aa18.7■□□□□ 0.58
PHGDH-213ENST00000641272 ORC3Q9UBD5 711 aaPredicted RBP18.7■□□□□ 0.58
PHGDH-213ENST00000641272 DNAJB4Q9UDY4 337 aa18.7■□□□□ 0.58
PHGDH-213ENST00000641272 PFKFB2O60825 505 aa18.69■□□□□ 0.58
PHGDH-213ENST00000641272 CLASP2O75122 1294 aaKnown RBP18.69■□□□□ 0.58
PHGDH-213ENST00000641272 GCFC2P16383 781 aaKnown RBP18.69■□□□□ 0.58
PHGDH-213ENST00000641272 XBP1P17861 261 aa18.69■□□□□ 0.58
PHGDH-213ENST00000641272 AK2P54819 239 aa18.69■□□□□ 0.58
PHGDH-213ENST00000641272 NHLH1Q02575 133 aa18.69■□□□□ 0.58
PHGDH-213ENST00000641272 RNASELQ05823 741 aaKnown RBP18.69■□□□□ 0.58
PHGDH-213ENST00000641272 CTTNQ14247 550 aaKnown RBP18.69■□□□□ 0.58
PHGDH-213ENST00000641272 EMC2Q15006 297 aa18.69■□□□□ 0.58
PHGDH-213ENST00000641272 NOMO2Q5JPE7 1267 aa18.69■□□□□ 0.58
PHGDH-213ENST00000641272 TMEM184AQ6ZMB5 413 aa18.69■□□□□ 0.58
PHGDH-213ENST00000641272 ZBTB33Q86T24 672 aa18.69■□□□□ 0.58
PHGDH-213ENST00000641272 FAM177A1Q8N128 213 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-213ENST00000641272 VPS52Q8N1B4 723 aa18.69■□□□□ 0.58
PHGDH-213ENST00000641272 NECAB1Q8N987 351 aa18.69■□□□□ 0.58
PHGDH-213ENST00000641272 CASP10Q92851 521 aa18.69■□□□□ 0.58
PHGDH-213ENST00000641272 MFSD14AQ96MC6 490 aa18.69■□□□□ 0.58
PHGDH-213ENST00000641272 JPH2Q9BR39 696 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-213ENST00000641272 INO80BQ9C086 356 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-213ENST00000641272 ZBP1Q9H171 429 aa18.69■□□□□ 0.58
PHGDH-213ENST00000641272 NRDE2Q9H7Z3 1164 aa18.69■□□□□ 0.58
PHGDH-213ENST00000641272 MINDY3Q9H8M7 445 aa18.69■□□□□ 0.58
PHGDH-213ENST00000641272 IFT122Q9HBG6 1241 aa18.69■□□□□ 0.58
PHGDH-213ENST00000641272 AGPAT5Q9NUQ2 364 aa18.69■□□□□ 0.58
PHGDH-213ENST00000641272 ZBTB39O15060 712 aa18.68■□□□□ 0.58
PHGDH-213ENST00000641272 SRGAP2CP0DJJ0 459 aa18.68■□□□□ 0.58
PHGDH-213ENST00000641272 SLC11A1P49279 550 aa18.68■□□□□ 0.58
PHGDH-213ENST00000641272 RAB27AP51159 221 aa18.68■□□□□ 0.58
PHGDH-213ENST00000641272 RARS2Q5T160 578 aaKnown RBP18.68■□□□□ 0.58
PHGDH-213ENST00000641272 PPP4R3AQ6IN85 833 aa18.68■□□□□ 0.58
PHGDH-213ENST00000641272 KANK3Q6NY19 840 aa18.68■□□□□ 0.58
PHGDH-213ENST00000641272 C12orf76Q8N812 135 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-213ENST00000641272 MRPL43Q8N983 215 aaKnown RBP18.68■□□□□ 0.58
PHGDH-213ENST00000641272 FEZF2Q8TBJ5 459 aa18.68■□□□□ 0.58
PHGDH-213ENST00000641272 PSPC1Q8WXF1 523 aaKnown RBP18.68■□□□□ 0.58
PHGDH-213ENST00000641272 PBXIP1Q96AQ6 731 aa18.68■□□□□ 0.58
PHGDH-213ENST00000641272 FAM20AQ96MK3 541 aa18.68■□□□□ 0.58
PHGDH-213ENST00000641272 POMKQ9H5K3 350 aa18.68■□□□□ 0.58
PHGDH-213ENST00000641272 DENND4AQ7Z401 1863 aa18.68■□□□□ 0.58
PHGDH-213ENST00000641272 OFD1O75665 1012 aa18.67■□□□□ 0.58
PHGDH-213ENST00000641272 CXCL14O95715 111 aa18.67■□□□□ 0.58
PHGDH-213ENST00000641272 SSBP05455 408 aaKnown RBP eCLIP18.67■□□□□ 0.58
PHGDH-213ENST00000641272 NEFLP07196 543 aa18.67■□□□□ 0.58
PHGDH-213ENST00000641272 P4HBP07237 508 aaKnown RBP18.67■□□□□ 0.58
PHGDH-213ENST00000641272 EPCAMP16422 314 aa18.67■□□□□ 0.58
PHGDH-213ENST00000641272 YWHABP31946 246 aaKnown RBP18.67■□□□□ 0.58
PHGDH-213ENST00000641272 AFF1P51825 1210 aaKnown RBP18.67■□□□□ 0.58
PHGDH-213ENST00000641272 CDC42EP1Q00587 391 aa18.67■□□□□ 0.58
PHGDH-213ENST00000641272 XKR9Q5GH70 373 aa18.67■□□□□ 0.58
PHGDH-213ENST00000641272 ZNF280BQ86YH2 543 aa18.67■□□□□ 0.58
PHGDH-213ENST00000641272 PRPF31Q8WWY3 499 aaKnown RBP18.67■□□□□ 0.58
PHGDH-213ENST00000641272 IGSF21Q96ID5 467 aa18.67■□□□□ 0.58
PHGDH-213ENST00000641272 VN1R3Q9BXE9 311 aa18.67■□□□□ 0.58
PHGDH-213ENST00000641272 DHX33Q9H6R0 707 aaKnown RBP18.67■□□□□ 0.58
PHGDH-213ENST00000641272 PCDHB2Q9Y5E7 798 aa18.67■□□□□ 0.58
PHGDH-213ENST00000641272 DKC1O60832 514 aaKnown RBP eCLIP18.66■□□□□ 0.581e-16■■■■■ 39.7
PHGDH-213ENST00000641272 GALTP07902 379 aa18.66■□□□□ 0.58
PHGDH-213ENST00000641272 SKIP12755 728 aa18.66■□□□□ 0.58
PHGDH-213ENST00000641272 KRT2P35908 639 aa18.66■□□□□ 0.58
PHGDH-213ENST00000641272 RFC5P40937 340 aa18.66■□□□□ 0.58
PHGDH-213ENST00000641272 SPIRE1Q08AE8 756 aa18.66■□□□□ 0.58
PHGDH-213ENST00000641272 LAMTOR4Q0VGL1 99 aa18.66■□□□□ 0.58
PHGDH-213ENST00000641272 EPHA7Q15375 998 aa18.66■□□□□ 0.58
PHGDH-213ENST00000641272 PTPN21Q16825 1174 aa18.66■□□□□ 0.58
PHGDH-213ENST00000641272 TPRNQ4KMQ1 711 aa18.66■□□□□ 0.58
PHGDH-213ENST00000641272 AGMOQ6ZNB7 445 aa18.66■□□□□ 0.58
PHGDH-213ENST00000641272 SUGP1Q8IWZ8 645 aaKnown RBP18.66■□□□□ 0.58
PHGDH-213ENST00000641272 TMEM87AQ8NBN3 555 aa18.66■□□□□ 0.58
PHGDH-213ENST00000641272 RNF149Q8NC42 400 aa18.66■□□□□ 0.58
PHGDH-213ENST00000641272 PRSS33Q8NF86 280 aa18.66■□□□□ 0.58
PHGDH-213ENST00000641272 TRAIPQ9BWF2 469 aa18.66■□□□□ 0.58
PHGDH-213ENST00000641272 RSAD1Q9HA92 442 aa18.66■□□□□ 0.58
PHGDH-213ENST00000641272 WDFY4Q6ZS81 3184 aa18.65■□□□□ 0.58
PHGDH-213ENST00000641272 C2orf16Q68DN1 1984 aa18.65■□□□□ 0.58
PHGDH-213ENST00000641272 C2CD4DB7Z1M9 353 aa18.65■□□□□ 0.58
PHGDH-213ENST00000641272 WNT7AO00755 349 aa18.65■□□□□ 0.58
PHGDH-213ENST00000641272 HOXB8P17481 243 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-213ENST00000641272 MRE11P49959 708 aa18.65■□□□□ 0.58
PHGDH-213ENST00000641272 SIGLEC14Q08ET2 396 aa18.65■□□□□ 0.58
PHGDH-213ENST00000641272 UBXN11Q5T124 520 aa18.65■□□□□ 0.58
PHGDH-213ENST00000641272 IER5LQ5T953 404 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms