RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 KIAA1958Q8N8K9 716 aa9.01□□□□□ -0.97
LINC01108-202ENST00000635227 GBP4Q96PP9 640 aa9.01□□□□□ -0.97
LINC01108-202ENST00000635227 OXSMQ9NWU1 459 aa9.01□□□□□ -0.97
LINC01108-202ENST00000635227 UCKL1Q9NWZ5 548 aa9.01□□□□□ -0.97
LINC01108-202ENST00000635227 MARF1Q9Y4F3 1742 aaKnown RBP9.01□□□□□ -0.97
LINC01108-202ENST00000635227 MAP2P11137 1827 aaKnown RBP9.01□□□□□ -0.97
LINC01108-202ENST00000635227 A0A1W2PP64 1363 aa9□□□□□ -0.97
LINC01108-202ENST00000635227 XRN1Q8IZH2 1706 aaKnown RBP9□□□□□ -0.97
LINC01108-202ENST00000635227 DDX3XO00571 662 aaKnown RBP eCLIP9□□□□□ -0.97
LINC01108-202ENST00000635227 GAS7O60861 476 aa9□□□□□ -0.97
LINC01108-202ENST00000635227 SLC9A1P19634 815 aa9□□□□□ -0.97
LINC01108-202ENST00000635227 PTGS1P23219 599 aa9□□□□□ -0.97
LINC01108-202ENST00000635227 SARSP49591 514 aaKnown RBP9□□□□□ -0.97
LINC01108-202ENST00000635227 SLURP1P55000 103 aa9□□□□□ -0.97
LINC01108-202ENST00000635227 PRAMEF18Q5VWM3 479 aa9□□□□□ -0.97
LINC01108-202ENST00000635227 CC2D1AQ6P1N0 951 aaPredicted RBP9□□□□□ -0.97
LINC01108-202ENST00000635227 KRT27Q7Z3Y8 459 aa9□□□□□ -0.97
LINC01108-202ENST00000635227 STPG3Q8N7X2 389 aa9□□□□□ -0.97
LINC01108-202ENST00000635227 CHTF18Q8WVB6 975 aa9□□□□□ -0.97
LINC01108-202ENST00000635227 ZCCHC14Q8WYQ9 949 aaKnown RBP9□□□□□ -0.97
LINC01108-202ENST00000635227 PRAM1Q96QH2 718 aa9□□□□□ -0.97
LINC01108-202ENST00000635227 SPATA25Q9BR10 227 aa9□□□□□ -0.97
LINC01108-202ENST00000635227 TACO1Q9BSH4 297 aaKnown RBP9□□□□□ -0.97
LINC01108-202ENST00000635227 PNNQ9H307 717 aaKnown RBP9□□□□□ -0.97
LINC01108-202ENST00000635227 IFT57Q9NWB7 429 aa9□□□□□ -0.97
LINC01108-202ENST00000635227 THG1LQ9NWX6 298 aaKnown RBP9□□□□□ -0.97
LINC01108-202ENST00000635227 STK26Q9P289 416 aa9□□□□□ -0.97
LINC01108-202ENST00000635227 NUP188Q5SRE5 1749 aa9□□□□□ -0.97
LINC01108-202ENST00000635227 PTPRUQ92729 1446 aa8.99□□□□□ -0.97
LINC01108-202ENST00000635227 NCOA3Q9Y6Q9 1424 aa8.99□□□□□ -0.97
LINC01108-202ENST00000635227 MPIG6BO95866 241 aa8.99□□□□□ -0.97
LINC01108-202ENST00000635227 COL6A1P12109 1028 aa8.99□□□□□ -0.97
LINC01108-202ENST00000635227 ZNF28P17035 718 aa8.99□□□□□ -0.97
LINC01108-202ENST00000635227 PTX3P26022 381 aaPredicted RBP8.99□□□□□ -0.97
LINC01108-202ENST00000635227 IL13P35225 146 aa8.99□□□□□ -0.97
LINC01108-202ENST00000635227 STAT3P40763 770 aa8.99□□□□□ -0.97
LINC01108-202ENST00000635227 SIAH1Q8IUQ4 282 aa8.99□□□□□ -0.97
LINC01108-202ENST00000635227 WRNIP1Q96S55 665 aa8.99□□□□□ -0.97
LINC01108-202ENST00000635227 SLC12A5Q9H2X9 1139 aa8.99□□□□□ -0.97
LINC01108-202ENST00000635227 PCIF1Q9H4Z3 704 aa8.99□□□□□ -0.97
LINC01108-202ENST00000635227 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.99□□□□□ -0.97
LINC01108-202ENST00000635227 INCENPQ9NQS7 918 aa8.99□□□□□ -0.97
LINC01108-202ENST00000635227 KCND1Q9NSA2 647 aa8.99□□□□□ -0.97
LINC01108-202ENST00000635227 RREB1Q92766 1687 aa8.99□□□□□ -0.97
LINC01108-202ENST00000635227 PRAMEF22A3QJZ6 481 aa8.98□□□□□ -0.97
LINC01108-202ENST00000635227 SCNN1BP51168 640 aa8.98□□□□□ -0.97
LINC01108-202ENST00000635227 ZNF174Q15697 407 aa8.98□□□□□ -0.97
LINC01108-202ENST00000635227 ZNF662Q6ZS27 426 aa8.98□□□□□ -0.97
LINC01108-202ENST00000635227 SYT8Q8NBV8 401 aa8.98□□□□□ -0.97
LINC01108-202ENST00000635227 SMC1BQ8NDV3 1235 aa8.98□□□□□ -0.97
LINC01108-202ENST00000635227 HIPK4Q8NE63 616 aa8.98□□□□□ -0.97
LINC01108-202ENST00000635227 ERCC4Q92889 916 aaPredicted RBP8.98□□□□□ -0.97
LINC01108-202ENST00000635227 CAMKK2Q96RR4 588 aa8.98□□□□□ -0.97
LINC01108-202ENST00000635227 ELF4Q99607 663 aaPredicted RBP8.98□□□□□ -0.97
LINC01108-202ENST00000635227 SYT17Q9BSW7 474 aa8.98□□□□□ -0.97
LINC01108-202ENST00000635227 AMNQ9BXJ7 453 aa8.98□□□□□ -0.97
LINC01108-202ENST00000635227 EDC4Q6P2E9 1401 aaKnown RBP8.97□□□□□ -0.97
LINC01108-202ENST00000635227 GOLGA6L22H0YM25 854 aa8.97□□□□□ -0.97
LINC01108-202ENST00000635227 FBXO21O94952 628 aa8.97□□□□□ -0.97
LINC01108-202ENST00000635227 BMP7P18075 431 aa8.97□□□□□ -0.97
LINC01108-202ENST00000635227 KRTAP19-4Q3LI73 84 aa8.97□□□□□ -0.97
LINC01108-202ENST00000635227 MCTP2Q6DN12 878 aa8.97□□□□□ -0.97
LINC01108-202ENST00000635227 TRMT10BQ6PF06 316 aaKnown RBP8.97□□□□□ -0.97
LINC01108-202ENST00000635227 LRSAM1Q6UWE0 723 aa8.97□□□□□ -0.97
LINC01108-202ENST00000635227 STRA8Q7Z7C7 330 aa8.97□□□□□ -0.97
LINC01108-202ENST00000635227 MARCH10Q8NA82 808 aaPredicted RBP8.97□□□□□ -0.97
LINC01108-202ENST00000635227 OR2W6PQ8NHA6 318 aa8.97□□□□□ -0.97
LINC01108-202ENST00000635227 ADAMTS17Q8TE56 1095 aa8.97□□□□□ -0.97
LINC01108-202ENST00000635227 RUNDC1Q96C34 613 aa8.97□□□□□ -0.97
LINC01108-202ENST00000635227 FOXRED1Q96CU9 486 aaPredicted RBP8.97□□□□□ -0.97
LINC01108-202ENST00000635227 GPR101Q96P66 508 aaPredicted RBP8.97□□□□□ -0.97
LINC01108-202ENST00000635227 ACSS2Q9NR19 701 aa8.97□□□□□ -0.97
LINC01108-202ENST00000635227 GALNT8Q9NY28 637 aa8.97□□□□□ -0.97
LINC01108-202ENST00000635227 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.97□□□□□ -0.97
LINC01108-202ENST00000635227 ASB1Q9Y576 335 aa8.97□□□□□ -0.97
LINC01108-202ENST00000635227 SPO11Q9Y5K1 396 aa8.97□□□□□ -0.97
LINC01108-202ENST00000635227 ZNF521Q96K83 1311 aa8.97□□□□□ -0.97
LINC01108-202ENST00000635227 METP08581 1390 aa8.97□□□□□ -0.97
LINC01108-202ENST00000635227 PLEKHH1Q9ULM0 1364 aa8.97□□□□□ -0.97
LINC01108-202ENST00000635227 FMN2Q9NZ56 1722 aa8.97□□□□□ -0.97
LINC01108-202ENST00000635227 CD163L1Q9NR16 1453 aa8.96□□□□□ -0.97
LINC01108-202ENST00000635227 CYP7B1O75881 506 aa8.96□□□□□ -0.98
LINC01108-202ENST00000635227 KNG1P01042 644 aa8.96□□□□□ -0.98
LINC01108-202ENST00000635227 ATF3P18847 181 aa8.96□□□□□ -0.98
LINC01108-202ENST00000635227 SAFB2Q14151 953 aaKnown RBP eCLIP8.96□□□□□ -0.98
LINC01108-202ENST00000635227 SMAD2Q15796 467 aaKnown RBP8.96□□□□□ -0.98
LINC01108-202ENST00000635227 SPOCD1Q6ZMY3 1216 aa8.96□□□□□ -0.98
LINC01108-202ENST00000635227 RTN4RL1Q86UN2 441 aaPredicted RBP8.96□□□□□ -0.98
LINC01108-202ENST00000635227 ZNF761Q86XN6 746 aaPredicted RBP8.96□□□□□ -0.98
LINC01108-202ENST00000635227 CAAP1Q9H8G2 361 aa8.96□□□□□ -0.98
LINC01108-202ENST00000635227 NALCNQ8IZF0 1738 aa8.95□□□□□ -0.98
LINC01108-202ENST00000635227 ADCYAP1R1P41586 468 aa8.95□□□□□ -0.98
LINC01108-202ENST00000635227 KCNC1P48547 511 aa8.95□□□□□ -0.98
LINC01108-202ENST00000635227 FNTBP49356 437 aa8.95□□□□□ -0.98
LINC01108-202ENST00000635227 FZD5Q13467 585 aa8.95□□□□□ -0.98
LINC01108-202ENST00000635227 SART3Q15020 963 aaKnown RBP8.95□□□□□ -0.98
LINC01108-202ENST00000635227 ESRP1Q6NXG1 681 aaKnown RBP8.95□□□□□ -0.98
LINC01108-202ENST00000635227 TXNDC5Q8NBS9 432 aaKnown RBP8.95□□□□□ -0.98
LINC01108-202ENST00000635227 CHAC2Q8WUX2 184 aa8.95□□□□□ -0.98
LINC01108-202ENST00000635227 C16orf92Q96LL3 132 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms