RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 LMO3Q8TAP4 145 aa21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 DCPSQ96C86 337 aaKnown RBP21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 NTPCRQ9BSD7 190 aaKnown RBP21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 TBX20Q9UMR3 447 aa21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 PAPPA2Q9BXP8 1791 aa21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 NCK2O43639 380 aa21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 MCCD1P59942 119 aaPredicted RBP21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 ACTR2P61160 394 aa21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 DLG4P78352 724 aa21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 ABHD15Q6UXT9 468 aa21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 LBX2Q6XYB7 198 aa21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 MAP4K3Q8IVH8 894 aa21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 SPIRE2Q8WWL2 714 aa21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 GPR88Q9GZN0 384 aa21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 PRDM10Q9NQV6 1147 aa21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 EMSYQ7Z589 1322 aa21.44■■□□□ 1.02
PCDHB11-202ENST00000624887 CCDC169A6NNP5 214 aa21.44■■□□□ 1.02
PCDHB11-202ENST00000624887 DDX3XO00571 662 aaKnown RBP eCLIP21.44■■□□□ 1.02
PCDHB11-202ENST00000624887 MCM3P25205 808 aa21.44■■□□□ 1.02
PCDHB11-202ENST00000624887 CETN1Q12798 172 aa21.44■■□□□ 1.02
PCDHB11-202ENST00000624887 TREML2Q5T2D2 321 aa21.44■■□□□ 1.02
PCDHB11-202ENST00000624887 ABCB6Q9NP58 842 aa21.44■■□□□ 1.02
PCDHB11-202ENST00000624887 PDLIM7Q9NR12 457 aa21.44■■□□□ 1.02
PCDHB11-202ENST00000624887 MAP2K7O14733 419 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 DGAT1O75907 488 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 STXBP2Q15833 593 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 C1orf220Q5T0J3 134 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 CCDC60Q8IWA6 550 aaPredicted RBP21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 SULF1Q8IWU6 871 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 MMGT1Q8N4V1 131 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 INTUQ9ULD6 942 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 TELO2Q9Y4R8 837 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 A0A0G2JMZ2 1700 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 PMM2O15305 246 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 CCDC172P0C7W6 258 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 CXCR5P32302 372 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 ICAM3P32942 547 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 PPP3CAQ08209 521 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 MEI1Q5TIA1 1274 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 PHLDB3Q6NSJ2 640 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 DLK2Q6UY11 383 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 MCPH1Q8NEM0 835 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 SLC30A5Q8TAD4 765 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 OLIG1Q8TAK6 271 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 PSMB7Q99436 277 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 KMT5AQ9NQR1 393 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 RNF14Q9UBS8 474 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 L1RE1Q9UN81 338 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 CSADQ9Y600 493 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 OTOFQ9HC10 1997 aa21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 ZC3H4Q9UPT8 1303 aaKnown RBP21.43■■□□□ 1.02
PCDHB11-202ENST00000624887 GRID2IPA4D2P6 1211 aa21.42■■□□□ 1.02
PCDHB11-202ENST00000624887 GRIN3BO60391 1043 aa21.42■■□□□ 1.02
PCDHB11-202ENST00000624887 EIF3JO75822 258 aaKnown RBP21.42■■□□□ 1.02
PCDHB11-202ENST00000624887 ADSSP30520 456 aa21.42■■□□□ 1.02
PCDHB11-202ENST00000624887 RTP1P59025 263 aa21.42■■□□□ 1.02
PCDHB11-202ENST00000624887 PRKCEQ02156 737 aa21.42■■□□□ 1.02
PCDHB11-202ENST00000624887 C2orf54Q08AI8 447 aa21.42■■□□□ 1.02
PCDHB11-202ENST00000624887 IFI16Q16666 785 aaKnown RBP21.42■■□□□ 1.02
PCDHB11-202ENST00000624887 MIS18BP1Q6P0N0 1132 aa21.42■■□□□ 1.02
PCDHB11-202ENST00000624887 USP50Q70EL3 339 aaPredicted RBP21.42■■□□□ 1.02
PCDHB11-202ENST00000624887 ANKRD35Q8N283 1001 aa21.42■■□□□ 1.02
PCDHB11-202ENST00000624887 ZSWIM2Q8NEG5 633 aa21.42■■□□□ 1.02
PCDHB11-202ENST00000624887 SPATA4Q8NEY3 305 aa21.42■■□□□ 1.02
PCDHB11-202ENST00000624887 BSNDQ8WZ55 320 aa21.42■■□□□ 1.02
PCDHB11-202ENST00000624887 UBXN6Q9BZV1 441 aa21.42■■□□□ 1.02
PCDHB11-202ENST00000624887 DENND3A2RUS2 1198 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 H2AFZP0C0S5 128 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 SUPT20HL2P0C7V6 817 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 PAFAH1B1P43034 410 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 SP4Q02446 784 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 EPC2Q52LR7 807 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 CCDC181Q5TID7 509 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 H2AFVQ71UI9 128 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 PLEKHO2Q8TD55 490 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 SYT11Q9BT88 431 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 KIFC3Q9BVG8 833 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 CYP26B1Q9NR63 512 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 RNF216Q9NWF9 866 aaPredicted RBP21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 FBXO40Q9UH90 709 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 PFASO15067 1338 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 IGSF9BQ9UPX0 1349 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 ANKRD63C9JTQ0 380 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 FTCDO95954 541 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 CNGA1P29973 690 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 SP2Q02086 613 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 CNTN2Q02246 1040 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 HDXQ7Z353 690 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 RIOX2Q8IUF8 465 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 LNX1Q8TBB1 728 aaPredicted RBP21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 CNKSR2Q8WXI2 1034 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 VTI1AQ96AJ9 217 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 XPNPEP1Q9NQW7 623 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 BTBD7Q9P203 1132 aa21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 SEPT9Q9UHD8 586 aaPredicted RBP21.41■■□□□ 1.02
PCDHB11-202ENST00000624887 A0A0A6YYK5 440 aaPredicted RBP21.4■■□□□ 1.02
PCDHB11-202ENST00000624887 GLTPD2A6NH11 291 aa21.4■■□□□ 1.02
PCDHB11-202ENST00000624887 ADM5C9JUS6 153 aa21.4■■□□□ 1.02
PCDHB11-202ENST00000624887 MYH9P35579 1960 aaKnown RBP21.4■■□□□ 1.02
PCDHB11-202ENST00000624887 GCLMP48507 274 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms