RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 WDR59Q6PJI9 974 aa23.43■■□□□ 1.34
SPAST-204ENST00000621856 GBP6Q6ZN66 633 aa23.43■■□□□ 1.34
SPAST-204ENST00000621856 PAXIP1Q6ZW49 1069 aaPredicted RBP23.43■■□□□ 1.34
SPAST-204ENST00000621856 PPTC7Q8NI37 304 aa23.43■■□□□ 1.34
SPAST-204ENST00000621856 AFG1LQ8WV93 481 aa23.43■■□□□ 1.34
SPAST-204ENST00000621856 EMID1Q96A84 441 aaPredicted RBP23.43■■□□□ 1.34
SPAST-204ENST00000621856 ERAP1Q9NZ08 941 aa23.43■■□□□ 1.34
SPAST-204ENST00000621856 ADGRG1Q9Y653 693 aa23.43■■□□□ 1.34
SPAST-204ENST00000621856 GOLGA6L9A6NEM1 432 aa23.42■■□□□ 1.34
SPAST-204ENST00000621856 KIF2AO00139 706 aaPredicted RBP23.42■■□□□ 1.34
SPAST-204ENST00000621856 HBP1O60381 514 aa23.42■■□□□ 1.34
SPAST-204ENST00000621856 SCP2P22307 547 aa23.42■■□□□ 1.34
SPAST-204ENST00000621856 POLR2FP61218 127 aaKnown RBP23.42■■□□□ 1.34
SPAST-204ENST00000621856 GRM1Q13255 1194 aa23.42■■□□□ 1.34
SPAST-204ENST00000621856 PDXDC1Q6P996 788 aa23.42■■□□□ 1.34
SPAST-204ENST00000621856 INTS8Q75QN2 995 aaKnown RBP23.42■■□□□ 1.34
SPAST-204ENST00000621856 TCP11Q8WWU5 503 aa23.42■■□□□ 1.34
SPAST-204ENST00000621856 NLRC4Q9NPP4 1024 aa23.42■■□□□ 1.34
SPAST-204ENST00000621856 DOCK3Q8IZD9 2030 aa23.42■■□□□ 1.34
SPAST-204ENST00000621856 KIF3CO14782 793 aa23.42■■□□□ 1.34
SPAST-204ENST00000621856 HNRNPDLO14979 420 aaKnown RBP23.42■■□□□ 1.34
SPAST-204ENST00000621856 GAS2O43903 313 aaKnown RBP23.42■■□□□ 1.34
SPAST-204ENST00000621856 NOL4O94818 638 aa23.42■■□□□ 1.34
SPAST-204ENST00000621856 LGALS2P05162 132 aa23.42■■□□□ 1.34
SPAST-204ENST00000621856 TRIM49P0CI25 452 aa23.42■■□□□ 1.34
SPAST-204ENST00000621856 TRIM49CP0CI26 452 aa23.42■■□□□ 1.34
SPAST-204ENST00000621856 IER5Q5VY09 327 aa23.42■■□□□ 1.34
SPAST-204ENST00000621856 IQSEC1Q6DN90 963 aa23.42■■□□□ 1.34
SPAST-204ENST00000621856 TAS1R3Q7RTX0 852 aa23.42■■□□□ 1.34
SPAST-204ENST00000621856 BAP1Q92560 729 aa23.42■■□□□ 1.34
SPAST-204ENST00000621856 JPH2Q9BR39 696 aaPredicted RBP23.42■■□□□ 1.34
SPAST-204ENST00000621856 SUGCTQ9HAC7 445 aa23.42■■□□□ 1.34
SPAST-204ENST00000621856 GOLGA8IPA6NC78 632 aa23.41■■□□□ 1.34
SPAST-204ENST00000621856 TMEM88BA6NKF7 163 aa23.41■■□□□ 1.34
SPAST-204ENST00000621856 LRRC53A6NM62 1247 aa23.41■■□□□ 1.34
SPAST-204ENST00000621856 GOLGA8JA6NMD2 632 aa23.41■■□□□ 1.34
SPAST-204ENST00000621856 SMPD1P17405 629 aa23.41■■□□□ 1.34
SPAST-204ENST00000621856 SLC9A1P19634 815 aa23.41■■□□□ 1.34
SPAST-204ENST00000621856 FMO5P49326 533 aa23.41■■□□□ 1.34
SPAST-204ENST00000621856 CRHR2Q13324 411 aa23.41■■□□□ 1.34
SPAST-204ENST00000621856 DUSP28Q4G0W2 176 aa23.41■■□□□ 1.34
SPAST-204ENST00000621856 BRDTQ58F21 947 aaPredicted RBP23.41■■□□□ 1.34
SPAST-204ENST00000621856 OR6J1Q8NGC5 347 aa23.41■■□□□ 1.34
SPAST-204ENST00000621856 POMGNT1Q8WZA1 660 aa23.41■■□□□ 1.34
SPAST-204ENST00000621856 ZNF592Q92610 1267 aa23.41■■□□□ 1.34
SPAST-204ENST00000621856 GCNT4Q9P109 453 aa23.41■■□□□ 1.34
SPAST-204ENST00000621856 SIP14410 1827 aa23.41■■□□□ 1.34
SPAST-204ENST00000621856 GTPBP10A4D1E9 387 aaKnown RBP23.4■■□□□ 1.34
SPAST-204ENST00000621856 ZBTB42B2RXF5 422 aa23.4■■□□□ 1.34
SPAST-204ENST00000621856 MAPK13O15264 365 aa23.4■■□□□ 1.34
SPAST-204ENST00000621856 PON1P27169 355 aa23.4■■□□□ 1.34
SPAST-204ENST00000621856 ADSSP30520 456 aa23.4■■□□□ 1.34
SPAST-204ENST00000621856 LIG4P49917 911 aa23.4■■□□□ 1.34
SPAST-204ENST00000621856 VAMP7P51809 220 aa23.4■■□□□ 1.34
SPAST-204ENST00000621856 APBA1Q02410 837 aa23.4■■□□□ 1.34
SPAST-204ENST00000621856 CAPSQ13938 189 aa23.4■■□□□ 1.34
SPAST-204ENST00000621856 SLC39A4Q6P5W5 647 aa23.4■■□□□ 1.34
SPAST-204ENST00000621856 SAAL1Q96ER3 474 aa23.4■■□□□ 1.34
SPAST-204ENST00000621856 NUCKS1Q9H1E3 243 aaKnown RBP23.4■■□□□ 1.34
SPAST-204ENST00000621856 GANQ9H2C0 597 aa23.4■■□□□ 1.34
SPAST-204ENST00000621856 PLCB1Q9NQ66 1216 aa23.4■■□□□ 1.34
SPAST-204ENST00000621856 PLAGL2Q9UPG8 496 aa23.4■■□□□ 1.34
SPAST-204ENST00000621856 EPN1Q9Y6I3 576 aaPredicted RBP23.4■■□□□ 1.34
SPAST-204ENST00000621856 K7ERI5 159 aa23.39■■□□□ 1.34
SPAST-204ENST00000621856 ACTN1P12814 892 aa23.39■■□□□ 1.34
SPAST-204ENST00000621856 HNRNPH3P31942 346 aaKnown RBP23.39■■□□□ 1.34
SPAST-204ENST00000621856 CYLC1P35663 651 aaPredicted RBP23.39■■□□□ 1.34
SPAST-204ENST00000621856 CDK17Q00537 523 aa23.39■■□□□ 1.34
SPAST-204ENST00000621856 DRP2Q13474 957 aa23.39■■□□□ 1.34
SPAST-204ENST00000621856 LRRC71Q8N4P6 559 aa23.39■■□□□ 1.34
SPAST-204ENST00000621856 ACRBPQ8NEB7 543 aa23.39■■□□□ 1.34
SPAST-204ENST00000621856 ZSWIM2Q8NEG5 633 aa23.39■■□□□ 1.34
SPAST-204ENST00000621856 TRAPPC12Q8WVT3 735 aa23.39■■□□□ 1.34
SPAST-204ENST00000621856 PRPF31Q8WWY3 499 aaKnown RBP23.39■■□□□ 1.34
SPAST-204ENST00000621856 PSPC1Q8WXF1 523 aaKnown RBP23.39■■□□□ 1.34
SPAST-204ENST00000621856 NDUFA10O95299 355 aa23.39■■□□□ 1.33
SPAST-204ENST00000621856 MYL7Q01449 175 aa23.39■■□□□ 1.33
SPAST-204ENST00000621856 RNPEPQ9H4A4 650 aa23.39■■□□□ 1.33
SPAST-204ENST00000621856 NHEJ1Q9H9Q4 299 aaPredicted RBP23.39■■□□□ 1.33
SPAST-204ENST00000621856 TNPO2O14787 897 aaKnown RBP23.38■■□□□ 1.33
SPAST-204ENST00000621856 HOXC6P09630 235 aa23.38■■□□□ 1.33
SPAST-204ENST00000621856 ZNF286BP0CG31 522 aa23.38■■□□□ 1.33
SPAST-204ENST00000621856 CYP2B6P20813 491 aa23.38■■□□□ 1.33
SPAST-204ENST00000621856 GARTP22102 1010 aa23.38■■□□□ 1.33
SPAST-204ENST00000621856 RGS2P41220 211 aa23.38■■□□□ 1.33
SPAST-204ENST00000621856 TM4SF4P48230 202 aa23.38■■□□□ 1.33
SPAST-204ENST00000621856 TNFAIP2Q03169 654 aa23.38■■□□□ 1.33
SPAST-204ENST00000621856 SNRNP35Q16560 246 aaKnown RBP23.38■■□□□ 1.33
SPAST-204ENST00000621856 ZNF484Q5JVG2 852 aa23.38■■□□□ 1.33
SPAST-204ENST00000621856 KLHDC7AQ5VTJ3 777 aa23.38■■□□□ 1.33
SPAST-204ENST00000621856 SFMBT2Q5VUG0 894 aa23.38■■□□□ 1.33
SPAST-204ENST00000621856 KCNN1Q92952 543 aa23.38■■□□□ 1.33
SPAST-204ENST00000621856 HHIPL1Q96JK4 782 aa23.38■■□□□ 1.33
SPAST-204ENST00000621856 IGKV6-21A0A0C4DH24 114 aa23.37■■□□□ 1.33
SPAST-204ENST00000621856 TULP1O00294 542 aaPredicted RBP23.37■■□□□ 1.33
SPAST-204ENST00000621856 ADCY3O60266 1144 aa23.37■■□□□ 1.33
SPAST-204ENST00000621856 PPFIA4O75335 1185 aa23.37■■□□□ 1.33
SPAST-204ENST00000621856 ADRB2P07550 413 aa23.37■■□□□ 1.33
SPAST-204ENST00000621856 MXD4Q14582 209 aaPredicted RBP23.37■■□□□ 1.33
SPAST-204ENST00000621856 PRAMEF19Q5SWL8 479 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms