RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 NRBP2Q9NSY0 501 aa8.82□□□□□ -1
CLK1-215ENST00000621181 USTQ9Y2C2 406 aa8.82□□□□□ -1
CLK1-215ENST00000621181 DMXL1Q9Y485 3027 aa8.82□□□□□ -1
CLK1-215ENST00000621181 FRYLO94915 3013 aa8.81□□□□□ -1
CLK1-215ENST00000621181 CCDC196A0A1B0GTZ2 297 aa8.81□□□□□ -1
CLK1-215ENST00000621181 CARNS1A5YM72 827 aa8.81□□□□□ -1
CLK1-215ENST00000621181 CHMP2AO43633 222 aa8.81□□□□□ -1
CLK1-215ENST00000621181 ZNF862O60290 1169 aa8.81□□□□□ -1
CLK1-215ENST00000621181 EPCAMP16422 314 aa8.81□□□□□ -1
CLK1-215ENST00000621181 GNA11P29992 359 aa8.81□□□□□ -1
CLK1-215ENST00000621181 CDC27P30260 824 aa8.81□□□□□ -1
CLK1-215ENST00000621181 PFKFB3Q16875 520 aaPredicted RBP8.81□□□□□ -1
CLK1-215ENST00000621181 LONRF3Q496Y0 759 aa8.81□□□□□ -1
CLK1-215ENST00000621181 KANK3Q6NY19 840 aa8.81□□□□□ -1
CLK1-215ENST00000621181 GLB1LQ6UWU2 654 aa8.81□□□□□ -1
CLK1-215ENST00000621181 CCDC149Q6ZUS6 474 aa8.81□□□□□ -1
CLK1-215ENST00000621181 DHX32Q7L7V1 743 aaKnown RBP8.81□□□□□ -1
CLK1-215ENST00000621181 FRMD5Q7Z6J6 570 aa8.81□□□□□ -1
CLK1-215ENST00000621181 ZNF598Q86UK7 904 aaKnown RBP8.81□□□□□ -1
CLK1-215ENST00000621181 TMEM173Q86WV6 379 aaPredicted RBP8.81□□□□□ -1
CLK1-215ENST00000621181 LINC01465Q8N7H1 131 aa8.81□□□□□ -1
CLK1-215ENST00000621181 RSPH1Q8WYR4 309 aa8.81□□□□□ -1
CLK1-215ENST00000621181 ACSF2Q96CM8 615 aaPredicted RBP8.81□□□□□ -1
CLK1-215ENST00000621181 GCOM2Q9BZD3 368 aaPredicted RBP8.81□□□□□ -1
CLK1-215ENST00000621181 ZBP1Q9H171 429 aa8.81□□□□□ -1
CLK1-215ENST00000621181 C6orf50Q9HD87 102 aa8.81□□□□□ -1
CLK1-215ENST00000621181 CYP26B1Q9NR63 512 aa8.81□□□□□ -1
CLK1-215ENST00000621181 INPP5FQ9Y2H2 1132 aa8.81□□□□□ -1
CLK1-215ENST00000621181 IRAK3Q9Y616 596 aa8.81□□□□□ -1
CLK1-215ENST00000621181 GVINP1Q7Z2Y8 2422 aa8.81□□□□□ -1
CLK1-215ENST00000621181 WDR81Q562E7 1941 aa8.81□□□□□ -1
CLK1-215ENST00000621181 ESYT2A0FGR8 921 aa8.8□□□□□ -1
CLK1-215ENST00000621181 GAS7O60861 476 aa8.8□□□□□ -1
CLK1-215ENST00000621181 CTSAP10619 480 aa8.8□□□□□ -1
CLK1-215ENST00000621181 SKIP12755 728 aa8.8□□□□□ -1
CLK1-215ENST00000621181 SFPQP23246 707 aaKnown RBP eCLIP8.8□□□□□ -1
CLK1-215ENST00000621181 PHKA2P46019 1235 aa8.8□□□□□ -1
CLK1-215ENST00000621181 POLGP54098 1239 aaPredicted RBP8.8□□□□□ -1
CLK1-215ENST00000621181 OTOP3Q7RTS5 596 aa8.8□□□□□ -1
CLK1-215ENST00000621181 DDX53Q86TM3 631 aaKnown RBP8.8□□□□□ -1
CLK1-215ENST00000621181 PPFIBP1Q86W92 1011 aa8.8□□□□□ -1
CLK1-215ENST00000621181 ADSSL1Q8N142 457 aa8.8□□□□□ -1
CLK1-215ENST00000621181 IGSF21Q96ID5 467 aa8.8□□□□□ -1
CLK1-215ENST00000621181 GBP3Q9H0R5 595 aa8.8□□□□□ -1
CLK1-215ENST00000621181 SFXN1Q9H9B4 322 aa8.8□□□□□ -1
CLK1-215ENST00000621181 CHST12Q9NRB3 414 aa8.8□□□□□ -1
CLK1-215ENST00000621181 FAM217BQ9NTX9 383 aaPredicted RBP8.8□□□□□ -1
CLK1-215ENST00000621181 FBXL21Q9UKT6 434 aa8.8□□□□□ -1
CLK1-215ENST00000621181 PIN4Q9Y237 131 aaKnown RBP8.8□□□□□ -1
CLK1-215ENST00000621181 EP300Q09472 2414 aaPredicted RBP8.8□□□□□ -1
CLK1-215ENST00000621181 SFNP31947 248 aa8.8□□□□□ -1
CLK1-215ENST00000621181 CIITAP33076 1130 aa8.8□□□□□ -1
CLK1-215ENST00000621181 ADD1P35611 737 aaKnown RBP8.8□□□□□ -1
CLK1-215ENST00000621181 DNM2P50570 870 aa8.8□□□□□ -1
CLK1-215ENST00000621181 RCAN1P53805 252 aa8.8□□□□□ -1
CLK1-215ENST00000621181 CDC42EP1Q00587 391 aa8.8□□□□□ -1
CLK1-215ENST00000621181 EXOSC10Q01780 885 aaKnown RBP8.8□□□□□ -1
CLK1-215ENST00000621181 DRP2Q13474 957 aa8.8□□□□□ -1
CLK1-215ENST00000621181 UGCGQ16739 394 aa8.8□□□□□ -1
CLK1-215ENST00000621181 MTERF2Q49AM1 385 aa8.8□□□□□ -1
CLK1-215ENST00000621181 NOMO2Q5JPE7 1267 aa8.8□□□□□ -1
CLK1-215ENST00000621181 BICD2Q8TD16 824 aa8.8□□□□□ -1
CLK1-215ENST00000621181 LPPQ93052 612 aa8.8□□□□□ -1
CLK1-215ENST00000621181 TBC1D13Q9NVG8 400 aa8.8□□□□□ -1
CLK1-215ENST00000621181 SEPT9Q9UHD8 586 aaPredicted RBP8.8□□□□□ -1
CLK1-215ENST00000621181 A0A087WZ62 844 aa8.79□□□□□ -1
CLK1-215ENST00000621181 MSH4O15457 936 aa8.79□□□□□ -1
CLK1-215ENST00000621181 SSBP05455 408 aaKnown RBP eCLIP8.79□□□□□ -1
CLK1-215ENST00000621181 GALTP07902 379 aa8.79□□□□□ -1
CLK1-215ENST00000621181 AOC1P19801 751 aa8.79□□□□□ -1
CLK1-215ENST00000621181 RFX1P22670 979 aa8.79□□□□□ -1
CLK1-215ENST00000621181 KLRC2P26717 231 aa8.79□□□□□ -1
CLK1-215ENST00000621181 ID4P47928 161 aa8.79□□□□□ -1
CLK1-215ENST00000621181 JAK3P52333 1124 aa8.79□□□□□ -1
CLK1-215ENST00000621181 AKAP17AQ02040 695 aaKnown RBP8.79□□□□□ -1
CLK1-215ENST00000621181 TDGQ13569 410 aa8.79□□□□□ -1
CLK1-215ENST00000621181 ADCK5Q3MIX3 580 aa8.79□□□□□ -1
CLK1-215ENST00000621181 LRCH2Q5VUJ6 765 aa8.79□□□□□ -1
CLK1-215ENST00000621181 CWF19L1Q69YN2 538 aaKnown RBP8.79□□□□□ -1
CLK1-215ENST00000621181 ERMP1Q7Z2K6 904 aa8.79□□□□□ -1
CLK1-215ENST00000621181 SIX5Q8N196 739 aa8.79□□□□□ -1
CLK1-215ENST00000621181 LENG9Q96B70 501 aa8.79□□□□□ -1
CLK1-215ENST00000621181 NLRP4Q96MN2 994 aa8.79□□□□□ -1
CLK1-215ENST00000621181 RIT2Q99578 217 aa8.79□□□□□ -1
CLK1-215ENST00000621181 FDXACB1Q9BRP7 624 aaPredicted RBP8.79□□□□□ -1
CLK1-215ENST00000621181 TRAIPQ9BWF2 469 aa8.79□□□□□ -1
CLK1-215ENST00000621181 EMILIN2Q9BXX0 1053 aa8.79□□□□□ -1
CLK1-215ENST00000621181 INO80BQ9C086 356 aaPredicted RBP8.79□□□□□ -1
CLK1-215ENST00000621181 NRDE2Q9H7Z3 1164 aa8.79□□□□□ -1
CLK1-215ENST00000621181 FAM105AQ9NUU6 356 aa8.79□□□□□ -1
CLK1-215ENST00000621181 MEIS3P2A8K0S8 358 aa8.78□□□□□ -1
CLK1-215ENST00000621181 ADAMTS3O15072 1205 aa8.78□□□□□ -1
CLK1-215ENST00000621181 PI15O43692 258 aa8.78□□□□□ -1
CLK1-215ENST00000621181 HMGB1P09429 215 aaKnown RBP8.78□□□□□ -1
CLK1-215ENST00000621181 MCM4P33991 863 aa8.78□□□□□ -1
CLK1-215ENST00000621181 RAB27AP51159 221 aa8.78□□□□□ -1
CLK1-215ENST00000621181 KRT32Q14532 448 aa8.78□□□□□ -1
CLK1-215ENST00000621181 ANGPT1Q15389 498 aa8.78□□□□□ -1
CLK1-215ENST00000621181 PTPN14Q15678 1187 aa8.78□□□□□ -1
CLK1-215ENST00000621181 LETM2Q2VYF4 491 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms