RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 HCSTQ9UBK5 93 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 PLAGL2Q9UPG8 496 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 IRAK3Q9Y616 596 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 MEIS3P2A8K0S8 358 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 RFXAPO00287 272 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 ITGB1P05556 798 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 AXLP30530 894 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 TMEM62Q0P6H9 643 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 AXDND1Q5T1B0 1012 aaPredicted RBP6.33□□□□□ -1.4
FMR1-217ENST00000620828 FAM102BQ5T8I3 360 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 PPP2R2DQ66LE6 453 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 COLGALT1Q8NBJ5 622 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 MAFAQ8NHW3 353 aaPredicted RBP6.33□□□□□ -1.4
FMR1-217ENST00000620828 MTRQ99707 1265 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 RHOBTB2Q9BYZ6 727 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 NAP1L2Q9ULW6 460 aaPredicted RBP6.33□□□□□ -1.4
FMR1-217ENST00000620828 STYXL1Q9Y6J8 313 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 PP2D1A8MPX8 630 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 CHMP2AO43633 222 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 DKC1O60832 514 aaKnown RBP eCLIP6.33□□□□□ -1.4
FMR1-217ENST00000620828 IGBP1P78318 339 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 NT5DC1Q5TFE4 455 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 POTEGQ6S5H5 508 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 AK8Q96MA6 479 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 TMEM134Q9H6X4 195 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 KCND2Q9NZV8 630 aa6.33□□□□□ -1.4
FMR1-217ENST00000620828 SEPT9Q9UHD8 586 aaPredicted RBP6.33□□□□□ -1.4
FMR1-217ENST00000620828 HELZP42694 1942 aaKnown RBP6.33□□□□□ -1.4
FMR1-217ENST00000620828 GLP2RO95838 553 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 CDC25AP30304 524 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 MCM7P33993 719 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 TECP42680 631 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 UBE3AQ05086 875 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 TMEM266Q2M3C6 531 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 NCAPH2Q6IBW4 605 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 RINT1Q6NUQ1 792 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 GPR65Q8IYL9 337 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 SLC39A11Q8N1S5 342 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 S1PR5Q9H228 398 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 BRMS1Q9HCU9 246 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 MARCH5Q9NX47 278 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 RWDD3Q9Y3V2 267 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.32□□□□□ -1.4
FMR1-217ENST00000620828 SRPRBQ9Y5M8 271 aaKnown RBP6.32□□□□□ -1.4
FMR1-217ENST00000620828 AFF1P51825 1210 aaKnown RBP6.32□□□□□ -1.4
FMR1-217ENST00000620828 MXD4Q14582 209 aaPredicted RBP6.32□□□□□ -1.4
FMR1-217ENST00000620828 MTERF2Q49AM1 385 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 SPIRE2Q8WWL2 714 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 ATXN2LQ8WWM7 1075 aaKnown RBP6.32□□□□□ -1.4
FMR1-217ENST00000620828 SH2D3AQ9BRG2 576 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 RUSC1Q9BVN2 902 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 TIPINQ9BVW5 301 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 PDZD7Q9H5P4 517 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 PRDM6Q9NQX0 595 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 CLEC1BQ9P126 229 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 CLIC4Q9Y696 253 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 DDX11L8A8MPP1 907 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 RPS6KA5O75582 802 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 TXKP42681 527 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 LEXMQ3ZCV2 418 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 COLGALT2Q8IYK4 626 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 CXorf38Q8TB03 319 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 TCP11Q8WWU5 503 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 DNAJC19Q96DA6 116 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 PRIMPOLQ96LW4 560 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 NACC1Q96RE7 527 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 ADAM2Q99965 735 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 JPH2Q9BR39 696 aaPredicted RBP6.32□□□□□ -1.4
FMR1-217ENST00000620828 FTOQ9C0B1 505 aaKnown RBP eCLIP6.32□□□□□ -1.43e-6■□□□□ 8.5
FMR1-217ENST00000620828 TMEM117Q9H0C3 514 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 FAM49AQ9H0Q0 323 aaPredicted RBP6.32□□□□□ -1.4
FMR1-217ENST00000620828 ATP6V0A4Q9HBG4 840 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 NOD1Q9Y239 953 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 NPTXRO95502 500 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 NAMPTP43490 491 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 TBC1D8BQ0IIM8 1120 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 HYAL1Q12794 435 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 COASYQ13057 564 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 GDPD5Q8WTR4 605 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 SLC22A17Q8WUG5 538 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 TMEM143Q96AN5 459 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 MIOSQ9NXC5 875 aa6.32□□□□□ -1.4
FMR1-217ENST00000620828 GRM6O15303 877 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 BAG4O95429 457 aaKnown RBP6.31□□□□□ -1.4
FMR1-217ENST00000620828 MAPTP10636 758 aaKnown RBP6.31□□□□□ -1.4
FMR1-217ENST00000620828 ADAM15Q13444 863 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 SLC39A14Q15043 492 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 ODR4Q5SWX8 454 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 SUSD6Q92537 303 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 EIF2AQ9BY44 585 aaKnown RBP6.31□□□□□ -1.4
FMR1-217ENST00000620828 ARF4P18085 180 aaPredicted RBP6.31□□□□□ -1.4
FMR1-217ENST00000620828 FGFR4P22455 802 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 LONP1P36776 959 aaKnown RBP6.31□□□□□ -1.4
FMR1-217ENST00000620828 SLC39A4Q6P5W5 647 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 TMEM173Q86WV6 379 aaPredicted RBP6.31□□□□□ -1.4
FMR1-217ENST00000620828 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.31□□□□□ -1.4
FMR1-217ENST00000620828 ZBP1Q9H171 429 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 C17orf75Q9HAS0 396 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 GPRC5CQ9NQ84 441 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 FAM105AQ9NUU6 356 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms